Os11g0146500

From RiceWiki
Revision as of 09:00, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0146500| Description = SPla/RYanodine receptor SPRY domain containing protein| Version = NM_001072268.1 GI:115484148 GeneID:4349761| Length...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0146500

Description

SPla/RYanodine receptor SPRY domain containing protein

Version

NM_001072268.1 GI:115484148 GeneID:4349761

Length

3226 bp

Definition

Oryza sativa Japonica Group Os11g0146500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:2085720..2088945

Sequence Coding Region

2085781..2086759,2088307..2088590

Expression

GEO Profiles:Os11g0146500

Genome Context

<gbrowseImage1> name=NC_008404:2085720..2088945 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:2085720..2088945 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggacgccgtcgccgcctacgatgcgctgcccgcgcctccctctccaccctcacccgcgttgccaccgccgttccagcccccgccccccgataccccgatatccgacgccaccccatccgccgccgaaacccccaatctccccgacacccccgcctccgcctcccccttctccgacgccgcgctcgccgccgacgcctccgatgccgatgcctcagccgtcgccgcgccacccgacgacgacgggaccaacccgttgggcggcgccatgaagcacatggccctcgcgcccccgccgccgccgaacaagaagtccaagaagaagaacagcaacagcgtctggaccaggcccaactcccgcaagggcaagaagaaggccaagcagccggccaacgccctcgccggcggcagcgccggcgccaacggccgcctccccaagccctccagcggcgacgacgagctcgtcctcaccccggcgccccgattcgcggccgagcgcaacgacgacgcgcccgatctgcccgtgctcctctcccgcgtcttcaagtccgacaaggtcgaggtctccgacgaccgcctcaccgccggcagcacaaagggataccggatggtgcgcgccacccgcggcgtcgctgccggcgcttggtacttcgaggtcaaggtccttcacctcggcagcaccggccacacccgccttggatgggctaccaacaatgctgacatccacgctcccgtaggctacgatgtgtttggatttggataccgcgacatggatggtaccaaggtgcacaaagcatggagggccaattatgccgatcaaggctatggcgagggcgatgtactcggcttctacattcatctacctgatggagagctgtatgagcccaagcagcctttcctggttcactacaaggggcttcctttccgcgcagaagctcccaaggcagctgagcagaagacgccggatccagttcctggtagtgagatatgctacttcaagaatggggtatgccagggcactgcttttgtggacattcctggagggcggtactacccagctgcgtcaatgtatacactgcctgaccagccaaactgcgaagtcagattcaactttggtcccaattttgagttctttccagaagattttggaggtcgatcagttcctcaaccaatgaataatgtgccttatcgaccatatcagctggcgaatgaggtgcctgcagaaaacggtactgctgaaaaaaccattaaactgcagtga</cdnaseq>

Protein Sequence

<aaseq>MADAVAAYDALPAPPSPPSPALPPPFQPPPPDTPISDATPSAAE TPNLPDTPASASPFSDAALAADASDADASAVAAPPDDDGTNPLGGAMKHMALAPPPPP NKKSKKKNSNSVWTRPNSRKGKKKAKQPANALAGGSAGANGRLPKPSSGDDELVLTPA PRFAAERNDDAPDLPVLLSRVFKSDKVEVSDDRLTAGSTKGYRMVRATRGVAAGAWYF EVKVLHLGSTGHTRLGWATNNADIHAPVGYDVFGFGYRDMDGTKVHKAWRANYADQGY GEGDVLGFYIHLPDGELYEPKQPFLVHYKGLPFRAEAPKAAEQKTPDPVPGSEICYFK NGVCQGTAFVDIPGGRYYPAASMYTLPDQPNCEVRFNFGPNFEFFPEDFGGRSVPQPM NNVPYRPYQLANEVPAENGTAEKTIKLQ</aaseq>

Gene Sequence

<dnaseqindica>62..1040#2588..2871#gtactctcttcagtcttcccttccaaaatcacacagaaaaccctcacacagaaaactgccgatggcggacgccgtcgccgcctacgatgcgctgcccgcgcctccctctccaccctcacccgcgttgccaccgccgttccagcccccgccccccgataccccgatatccgacgccaccccatccgccgccgaaacccccaatctccccgacacccccgcctccgcctcccccttctccgacgccgcgctcgccgccgacgcctccgatgccgatgcctcagccgtcgccgcgccacccgacgacgacgggaccaacccgttgggcggcgccatgaagcacatggccctcgcgcccccgccgccgccgaacaagaagtccaagaagaagaacagcaacagcgtctggaccaggcccaactcccgcaagggcaagaagaaggccaagcagccggccaacgccctcgccggcggcagcgccggcgccaacggccgcctccccaagccctccagcggcgacgacgagctcgtcctcaccccggcgccccgattcgcggccgagcgcaacgacgacgcgcccgatctgcccgtgctcctctcccgcgtcttcaagtccgacaaggtcgaggtctccgacgaccgcctcaccgccggcagcacaaagggataccggatggtgcgcgccacccgcggcgtcgctgccggcgcttggtacttcgaggtcaaggtccttcacctcggcagcaccggccacacccgccttggatgggctaccaacaatgctgacatccacgctcccgtaggctacgatgtgtttggatttggataccgcgacatggatggtaccaaggtgcacaaagcatggagggccaattatgccgatcaaggctatggcgagggcgatgtactcggcttctacattcatctacctgatggagagctgtatgagcccaagcagcctttcctggttcactacaaggggcttcctttccgcgcagaagctcccaaggcagctgagcagaagacgccggatccagttcctggtgggtatcattgtgttacttcatgtgtctgaataaactggtggtagattgccagccaggaaaacaacacacgctacttttcacaaaacaacttggtatgaactagcaatttcacaaataataagattctctatgtaataacaaggatgcgtgtttcatgatgttatatggaatacttggagtaatgtagaatttgtaccaattacggaattaccggtagtagatttacatagataaagtgatttaggatccaggacaacagattcgagtgctatttacatgtatatggttatataggaaatattagaacttccaatagctgtaatgtgacagtggtgcacttgtcctaacaaaactaaaaagtacgtttaattaagtttttgcatcctatgtttgagcaagtttctgatctctgtttggttggacacattggtacctactcctacatgtgtttcaagtcactgcacctccattgcacaaactagaaagtagtttctactcactgctcttgaaatcatttccaaagcataaagtgtcttgtaccaagaaatatagctattgcacaaattgtcatcattattattggaggttcttagcgctgaagcatagtgaatgcagcatacagttcataagtcacaatgtaagaaagagagcaagaaatgcagcaaatgcttctctagcaatgctctcttgagaggcacaacatgaaaaatgtaacaatttgcttctacagttgtgcgtaacttattgatttgccactcaatcaaagacaagaaacacctaccaaatgttactaaatttacccatattgttctgttcaagagtatctatgtcatcatctgaccttaaattatattcttgactgtttgacagtgcatagtcttttttgtattccatactagtaaaaacaaatacctgcaacctcacttttttgagaagataatatgttcttgactattatatcctaaagtataattacttatttggttctggaatttatctacatcaaaacaagtactgcatgatatgctgtaccaatcctaactcgaaggtgcaatcttcctactatatcataggaggttacttttgggagtgtttacttatccagccatcattgcaatcttatcgtgcagaagattccattatgtttatgtgcacatgaataaaacgggcagttctttcttatctgttttcttatgatgaagtcagaaatcgatgactgtaaagtttttgttgcctcaaagtcagtaattgtaaataagtgcacattagtaccttccattgaatcactatattttgcttacatggattaaaaaagggatttcttgtttgttcttcccatagaaaaaaaatcagtatcctatatgacatttacacaattgcacttaaatgacatttcctactttctagcatccattgttagatgctagaaagtatccatcgtaagtaggaaaacaagggatgctagaaagtagcaatttgtgcagcctctcctctggccttcttagatattccattttaatactttatggttcttgcaaatgcaggtagtgagatatgctacttcaagaatggggtatgccagggcactgcttttgtggacattcctggagggcggtactacccagctgcgtcaatgtatacactgcctgaccagccaaactgcgaagtcagattcaactttggtcccaattttgagttctttccagaagattttggaggtcgatcagttcctcaaccaatgaataatgtgccttatcgaccatatcagctggcgaatgaggtgcctgcagaaaacggtactgctgaaaaaaccattaaactgcagtgaaaattctgctttagttagagcttatgtaatccggttaaacagcacgcgggctgatggctatagctggtttagtaatgtttgtctggttagatggatgctgtagttattgaatatttttcacttgatggtttggccatttgaccttcgtgtagcaacgcatgccttcaatctttcccatccatgatggggcgaagttaatccgagatgttggggggcggtaagggcggttgcacgtagtctagcagtgggatgaggattaagggcgacagtttaatactcataatatgtaatatttggtcaataatgtttggccgaatcttatcctaaggaggagtaatacaaatagatgagaggt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0146500, RefSeq:Os11g0146500