BGIOSGA027717

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Revision as of 07:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027717| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027717, complete gene.| tag = OJ1163_...")
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Gene Name

BGIOSGA027717

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027717, complete gene.

LocusTag

OJ1163_G08.28

Ensembl Transcript ID

BGIOSGA027717-TA

Ensembl Protein ID

BGIOSGA027717-PA

Length

3557

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1629467..1633023

Sequence Coding Region

1632902..1633023,1632709..1632814),complement(1632518..1632622,1632348..1632425),complement(1631831..1631886
,1631095..1631152),complement(1630323..1630448,1629838..1629933),complement(1629659..1629730
,1629467..1629529

Genome Context

<gbrowseImage1> name=IndicaChromosome08:1629467..1633023 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:1629467..1633023 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGGCGACGGCGACGGCGGCTGCGGCCGCCCCGGCGGCGGTGCCCGCGCTGGTGTCCCCCTTGTCCCGCCGCGCCTTCTTCCCGCTCCCTCGTCGCGCCGGCCCCAAATCGCTTCGGGTCTTCGCGTCGGCGGCGAGGCGACGTGGGTTGGTCGTGGTGGCGGCGGATGCGGCAGCGGCGGCAGGTGGCGCGGAGTTCAGCGACGAGGAGAACCCCTACGAGATTCTGGGTATTACCCCGCTTGATAGCTTCGACCACATGAAGCTGGCCTACAAGAGGAAGCACAAGGAAGCGGACGAGAATGGAGATCAGTACTACCTGTCAAAGTTGGAGAAGGCATACGACACTGTGATGATGCAGCAGCTGCAGTATAGGAAGAAAGGAGTAACATATGGTTCTGTTCAGGTGTCGAAGGATATCAAGTATGCTGATGACCAGCCAATTGTTCCTTGGGGACCTAGATCCTCCAAATCAACAGTAAAGGACATGCGCATCAATTTAGGAATATCAGCAGCCATTGTTGTATGGATAGCTATCATGGGCAATGCGGACTGGAAGCCATTGCAGTTCCTATGTTTTGCTTTCTTCTACAGAATACTTCAAAAGCTAAGGGCTACTGAACCACCAATAACGCCAATATATAATGAGTATGGTGAGGTTGAAGGACGTGGAATACGAATGGCAAAACGAGTAGTCCGTGCTTTGGGTTTGATATTTGGATGTGTATTTGCTGCGTCATTGGGTTATACAGCAGCTGTTAACGTGATTGAGTTTTCATGGCAGTATACTCCACGCATTGTTTATTACTATCAGGAGTTGATTGTTACAGCAGCTACCGCTGCTCTGCTGTACATCACAGCCTCATACTACCGGTAA</cdnaseq>

Protein Sequence

<aaseq>MATATATAAAAAPAAVPALVSPLSRRAFFPLPRRAGPKSLRVFASAARRRGLVVVAADAAAAAGGAEFSDEENPYEILGITPLDSFDHMKLAYKRKHKEADENGDQYYLSKLEKAYDTVMMQQLQYRKKGVTYGSVQVSKDIKYADDQPIVPWGPRSSKSTVKDMRINLGISAAIVVWIAIMGNADWKPLQFLCFAFFYRILQKLRATEPPITPIYNEYGEVEGRGIRMAKRVVRALGLIFGCVFAASLGYTAAVNVIEFSWQYTPRIVYYYQELIVTAATAALLYITASYYR</aaseq>

Gene Sequence

<dnaseqindica>1..122#210..315#402..506#599..676#1138..1193#1872..1929#2576..2701#3091..3186#3294..3365#3495..3557#ATGGCGACGGCGACGGCGACGGCGGCTGCGGCCGCCCCGGCGGCGGTGCCCGCGCTGGTGTCCCCCTTGTCCCGCCGCGCCTTCTTCCCGCTCCCTCGTCGCGCCGGCCCCAAATCGCTTCGGTAAATTCACCTTGCCGCTTTTCGGACCGGGGTTGTTTTGTTTTGTGGATAAGTTTGAGATTTTTTTTTTTTTGGCATGGAATGAAGGGTCTTCGCGTCGGCGGCGAGGCGACGTGGGTTGGTCGTGGTGGCGGCGGATGCGGCAGCGGCGGCAGGTGGCGCGGAGTTCAGCGACGAGGAGAACCCCTACGAGGTGGAAGCTGAAATGAGCAGTTTCCCCTAAACTTTTATTCGCTCGGTGGACTTGTGTTTTGATTTTTTGCGCTGTTGGATTGTTAGATTCTGGGTATTACCCCGCTTGATAGCTTCGACCACATGAAGCTGGCCTACAAGAGGAAGCACAAGGAAGCGGACGAGAATGGAGATCAGTACTACCTGTCAAAGGTTCTGTATTGTGCAGAGATTGTATGTTTGGGCTTGCAATGTTACTGTTATTTTGTTGCTCGGCGCTGATGATATACTTGTTGTGGTTTCAGTTGGAGAAGGCATACGACACTGTGATGATGCAGCAGCTGCAGTATAGGAAGAAAGGAGTAACATATGGTTCTGTTCAGGTCAGATTTCTATAAATGCAGAGGCACCCAAAACTGCAAGATTTTAGAGTGCTTTCCTACATATCCTATTTGCAAAAGAAACAAGTTTTGTGAGTATTCGGTTTACTAGTGCTTATCACAGGATTATAACACATAAGATGGAGGCAAGTAACTAAACACTAAAACACATGCTATGAATGGCACCATCTCGCACTGGTGTTTATGAAAATTAGGGGACCAGTTACCACTGCATTGAAAATATATAAAGAACTTTGGAAATGGATAGAGGATCAAACAAGGCAACAGTTGTTATTATATCCAGACATAAGTCACCTACTACAGTTAGTTTATCCACAAACATTTTTTGTTCTATTGATAAACTAGTAGCTCAAAAGTCGTCTACATCATTTCCTACAATTACAATTATATTATCCAGTTATGATTTTATTCACCGGTGCCCTGGTTTTTGTTTCCACTGTCAGGTGTCGAAGGATATCAAGTATGCTGATGACCAGCCAATTGTTCCTTGGGGACCTAGGTACCTTTTTAATCAAGTTTATTATTAGAATACTATATTTCATTAGTCCATCAATAATCTCTTTGGGTGTATGTCAATGATTGATGTGATGCATGTTTATGGAAAATAACAAGCTTCTATCTTTCATATAAACACAGCCATGAAGATTTGGTAGAGATCATAAGAAATTTGAATTGCCCTGTTTCTCTTGCGAAGTGGATGAGGCCGCTGAAAGGCAGGCCTGTCCTACAAGCTTTGCCCTATTCAGTTTTGCTTTCCTCAGCTGGTGTTTTGTTTTCATTTCCATCTTATAGGACAAGCATTGTACATGAGCAGTGAAATTTCCAGGCCCCCATCGGATGGCCTATTCAGCCAAAGAAAAAGCCAAAATTTAAATTTTCAAACTTAATTTTGACATTGATTTTGAGATATTTTCAACGTAGTTTCTTTTTCAGCATTGGCTTTAAGTCACCGAGAACACATATATAAAAGTTTTACCTACAAATTCATTTTTATTCTCTAATAAGCCGTTTTGGCTTATTACGAAAAAAAGCCAAACGATGAGGCCCCCAATGTTCTAGTTCTGCATGGACAGCGAAATTGTTGAGAAGGATATGCACATAGAATGCTTGTTATTTAAATTAAACAGAAACATCCATTTGAATCCAATAACTAGTGGTTGATATATTCTTCTTGCAGATCCTCCAAATCAACAGTAAAGGACATGCGCATCAATTTAGGAATATCAGCAGCCATTGTATGCAGCTCTTCTCTTAATATTTAGCACATGCCTATATCAACTAGTGATATAATTCTGACCTTTTTTTTTCCTTTTTTGCAATTTTGTGGCACTGTCTTCCATATCTGCAAGGGCTCTATATCATAATTGTTATAACAAAATCTATCTATTTTTAAAGATATTGATTCTCTGGGGTTTACTTATAAGTTGGGAGCATGCTTCTGTGCGGTATAATGTTCTTGTAATATGTTAGTTTGAATGCATGCACTATTATATAGTTCTATCGTTGTGCTCCAGTCCAAAATAGATGCTGTCATGCTGCTTTAGCCTAAACAAGTTTTTGTTCAGATACTTCTTGTTTTGATTTATCTAGGTAATGTTTCTGCTTGAATGCCCTTATTAAGAGCCCAAAGGTATATAAGTCCTATTGGATTATCTATAACCACGCGGCTAGGTTACTTTTGTTTAAAACCTTCATATGTTTCCGAGGTCAATTAATAAGAGTAAACATGTTGTTTCTTTTTGTAAAGCTAGAATTGGCACTATTTAGACAATGCGAGTAACACTCCTATGTTTTTGTTCTAGACAATAATGCTTTGAGGATACCTCTATCTCAATGGTTACGATTTTCTTGCAAAAGATTTTTATTTGTACTACCCTGCAGGTTGTATGGATAGCTATCATGGGCAATGCGGACTGGAAGCCATTGCAGTTCCTATGTTTTGCTTTCTTCTACAGAATACTTCAAAAGCTAAGGGCTACTGAACCACCAATAACGCCAATATATAATGTGAGAAAATATTTCTTAGTCACCTCTATTTACCTTTTTATGAATCATGATACTGTAATTTGCACATTTTACTGTGGAGTGCCATGCTGTTGTTTGCTACTTCCATAATTATCAGTTTTTTTTGTCAAATATAATTAATGTATTTTTACTGAACCTGTTTCATCATTTGACTTCGCTTCCATTACCTGATTCTGTTGTAAACTGAAAGGCAATTAAACAAAAGAAGATGCGCAGAATTCCGTCCCCCAAAAGCTTTTGTAACTTTTCAAATGGGGGTGGTTCTTACTGATGATGGGTACCATCATGAATTTATTTTATATTAATCTTATGACCGTTATTTGAAATGATTAGACAATGGTCATATGATCGCATCCTGGTGTTTTCTGCAGGAGTATGGTGAGGTTGAAGGACGTGGAATACGAATGGCAAAACGAGTAGTCCGTGCTTTGGGTTTGATATTTGGATGTGTATTTGCTGCGTCATTGGTAAGCAATGCTGGAATTTTCTTGATCTGCTGCTGCCATGTTATCTACCTATCATAATATTTATCAGTTGCCTTTTGGTTTGGTTTTCTTTGTATGAATCTTTCCAGGGTTATACAGCAGCTGTTAACGTGATTGAGTTTTCATGGCAGTATACTCCACGCATTGTTTATTACTATCAGGTACAAAAGAATATGCACTTTCTTTTTATCAAATGCAAAGATTTGTAGATCTATCAACTCTGTTCAGAACCATTGCCTACTATTATATATAAAAAAGGGAAAAACTAACTACCTGGTGATTTCTTCCAGGAGTTGATTGTTACAGCAGCTACCGCTGCTCTGCTGTACATCACAGCCTCATACTACCGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027717