BGIOSGA027724

From RiceWiki
Revision as of 07:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027724| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027724, complete gene.| tag = OJ1499_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027724

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027724, complete gene.

LocusTag

OJ1499_A07.35

Ensembl Transcript ID

BGIOSGA027724-TA

Ensembl Protein ID

BGIOSGA027724-PA

Length

2115

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1556213..1558327

Sequence Coding Region

1556213..1558327

Genome Context

<gbrowseImage1> name=IndicaChromosome08:1556213..1558327 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:1556213..1558327 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATCGGCGGGAGGCCGCTGCGACGGCTGCCACGGCGACTTCGGCCTCTGGGAGCCTCCCTTGACGGCGGAGTGCTCGCACAGGTTCCACCTCCACTGCGTCGTCTCCGGCGCCGACGTCTGCCCGGCGTGCAACGCGCGATGGACCAACGCGCCATCGAACCCGCCGCCGCAACCCGCCGGAGGCAGCACGACGCCGTTTGGACAGACGACGGGCTTTCCCATGCGCGTCCGGCCATGGTCGTCGTGCGACAAATGCCGCGGCGTCATAGACCACAGCCAGCCCACCGTCACGTCCGAGTGCAGCCACACGTTCCACCTCCGCTGCTTCTCCGGGAGCGTCATCTGCCCGGCGTGCAACGCGCGGTGGCGCGACACGGTGGCCATGCCAAACCCTTCGCCGGCGCCGCCGTCCACCTTATTTCCCGCCGGCGTTCGCGCGCCGCCGCCGACCTTTTCGCCCTTCTGGGTGAGCCAAGAGTATGACGACGACGAGCCGGTGGAGCCGCCGGTAGCGGCACACGGTGGCGGCGTGGCACCGGCGAGCAATGGGGCGCTCGTCGTCAGGACGCACTGCGAGCACACGGCCGTGGCGAGGAGCGTGATCAGGGACAATTTCGCCGTCCTTGTCCATGCCAAAGCTCCTAGCATCGCCGTGGCGGAGGCGACGGCGGCGGCGCGCGCGCCGGTCGACCTCGTCACGGTGCTCGACGTGAGCGGCAGCATGGAAGGCTACAAGCTCACGCTCCTGAAGCGCGCCATGGGGTTTGTCATTGATAAGCTCGGCCCCGGCGACCGCCTCGCCGTCGTGTCCTTCTCCTACAATGCGCAGCGAGTGATCCGGCTGACGCGGATGTCGGACGACGGCAAGGCGTCGGCCAAGAGCGCCGTGGAATCCCTCGCGGCGGGCGGCGGCACGAACATCCTCAAGGGCCTTGTCGAAGCCGCCAAGGTGTTCGACGGTCGCCGCTACCGGAACGCCGTCGCCAGCGTCATCCTTCTCTCCGACGGTCAAGACACGTACAATGTCAACGGCGGGTGGGGCGCCTCGAACTCAAAGAACTACAGTGTTCTCGTGCCGCCTTCCTTCAAGCGCTCCGGCGACCGGCGCCTGTCGGTCCACACGTTCGGCTTCGGCACCGACCACGACGCGGCGGCGATGCACGCCATCGCGGAGGAGACCGGGGGCACGTTCTCCTTCATCGAGAACCAGGCCGTCGTCCAGGACGCGTTCGCGCAGTGCATCGGCGGGCTCCTCTCGGTCACCGTGCAGGAGGCGCGCATCGCCATCACCTGCCCGCACCCCGGCGTCCGCGTCCGGTCGGTCAAGTCCGGTCGCTACGAGAGCCTCGTCAATGGGGACGGCCGGGCCGCGTCGGTGGACGTCGGCGAGCTCTACGCCGACGAGGAGAGGCGTTTCTTGGTGTTCGTGGACGTGCCAGCAGCCGGCGCCGGGGAAGACGTCACAGAACTGATCAAGGTCAGCTGCACATACCGCGACACCGCGAGTCGGCAGCAGATGGTCGTCGCCGGCGAGCACGCCGTAGTGCAAAGACCAGTGGAGGTGGCCACCAACATGGAGCCGTCCATTGAGGTGGAGCGCGAGCGTTTCCGCGTGGAGGCAACCGAAGACATCGCGGCGGCGCAAGAAGCAGCCGAGCGCGGCGCGCACGCGGCGGCGAAGGCGATACTCGACCGCCGGCAGGAGGCGCTCGCCCGGTCGGCGCCGGGTCTCGCCGGCGACGCCAGGTGCGCGGCGCTGGTGTCGGAGCTGCGCGAGCTGAGCGCCCGCGTGGCGAGCAGGCGGGAGTACGAGCAGACCGGGCGCGCGTGCATGCTCGCCGGCATGAGCTCGCACGCACAGCAGCGCGCCACGTCGGTGCAGCTGTTTGGAGCGGCGGCGCCGACGTGGTCAATGCCGATGTGTGGATCGGCGGCGCCGCCATCTCTCTCTTTCGGGGGGTTTGGAGGGTTCGCGACGCCGGCGATGCGGAGCATGGTGGAGTCGTCCCGAAAGAGAAGAAAGGGCGGCGACGGAAGCTTAAGCTTTTTGGATCTGGTCCGAACTGAGGAAGAAGCCGGCAGCTCAGATGACGAGAAGGAGAACCTGTAA</cdnaseq>

Protein Sequence

<aaseq>MASAGGRCDGCHGDFGLWEPPLTAECSHRFHLHCVVSGADVCPACNARWTNAPSNPPPQPAGGSTTPFGQTTGFPMRVRPWSSCDKCRGVIDHSQPTVTSECSHTFHLRCFSGSVICPACNARWRDTVAMPNPSPAPPSTLFPAGVRAPPPTFSPFWVSQEYDDDEPVEPPVAAHGGGVAPASNGALVVRTHCEHTAVARSVIRDNFAVLVHAKAPSIAVAEATAAARAPVDLVTVLDVSGSMEGYKLTLLKRAMGFVIDKLGPGDRLAVVSFSYNAQRVIRLTRMSDDGKASAKSAVESLAAGGGTNILKGLVEAAKVFDGRRYRNAVASVILLSDGQDTYNVNGGWGASNSKNYSVLVPPSFKRSGDRRLSVHTFGFGTDHDAAAMHAIAEETGGTFSFIENQAVVQDAFAQCIGGLLSVTVQEARIAITCPHPGVRVRSVKSGRYESLVNGDGRAASVDVGELYADEERRFLVFVDVPAAGAGEDVTELIKVSCTYRDTASRQQMVVAGEHAVVQRPVEVATNMEPSIEVERERFRVEATEDIAAAQEAAERGAHAAAKAILDRRQEALARSAPGLAGDARCAALVSELRELSARVASRREYEQTGRACMLAGMSSHAQQRATSVQLFGAAAPTWSMPMCGSAAPPSLSFGGFGGFATPAMRSMVESSRKRRKGGDGSLSFLDLVRTEEEAGSSDDEKENL</aaseq>

Gene Sequence

<dnaseqindica>1..2115#ATGGCATCGGCGGGAGGCCGCTGCGACGGCTGCCACGGCGACTTCGGCCTCTGGGAGCCTCCCTTGACGGCGGAGTGCTCGCACAGGTTCCACCTCCACTGCGTCGTCTCCGGCGCCGACGTCTGCCCGGCGTGCAACGCGCGATGGACCAACGCGCCATCGAACCCGCCGCCGCAACCCGCCGGAGGCAGCACGACGCCGTTTGGACAGACGACGGGCTTTCCCATGCGCGTCCGGCCATGGTCGTCGTGCGACAAATGCCGCGGCGTCATAGACCACAGCCAGCCCACCGTCACGTCCGAGTGCAGCCACACGTTCCACCTCCGCTGCTTCTCCGGGAGCGTCATCTGCCCGGCGTGCAACGCGCGGTGGCGCGACACGGTGGCCATGCCAAACCCTTCGCCGGCGCCGCCGTCCACCTTATTTCCCGCCGGCGTTCGCGCGCCGCCGCCGACCTTTTCGCCCTTCTGGGTGAGCCAAGAGTATGACGACGACGAGCCGGTGGAGCCGCCGGTAGCGGCACACGGTGGCGGCGTGGCACCGGCGAGCAATGGGGCGCTCGTCGTCAGGACGCACTGCGAGCACACGGCCGTGGCGAGGAGCGTGATCAGGGACAATTTCGCCGTCCTTGTCCATGCCAAAGCTCCTAGCATCGCCGTGGCGGAGGCGACGGCGGCGGCGCGCGCGCCGGTCGACCTCGTCACGGTGCTCGACGTGAGCGGCAGCATGGAAGGCTACAAGCTCACGCTCCTGAAGCGCGCCATGGGGTTTGTCATTGATAAGCTCGGCCCCGGCGACCGCCTCGCCGTCGTGTCCTTCTCCTACAATGCGCAGCGAGTGATCCGGCTGACGCGGATGTCGGACGACGGCAAGGCGTCGGCCAAGAGCGCCGTGGAATCCCTCGCGGCGGGCGGCGGCACGAACATCCTCAAGGGCCTTGTCGAAGCCGCCAAGGTGTTCGACGGTCGCCGCTACCGGAACGCCGTCGCCAGCGTCATCCTTCTCTCCGACGGTCAAGACACGTACAATGTCAACGGCGGGTGGGGCGCCTCGAACTCAAAGAACTACAGTGTTCTCGTGCCGCCTTCCTTCAAGCGCTCCGGCGACCGGCGCCTGTCGGTCCACACGTTCGGCTTCGGCACCGACCACGACGCGGCGGCGATGCACGCCATCGCGGAGGAGACCGGGGGCACGTTCTCCTTCATCGAGAACCAGGCCGTCGTCCAGGACGCGTTCGCGCAGTGCATCGGCGGGCTCCTCTCGGTCACCGTGCAGGAGGCGCGCATCGCCATCACCTGCCCGCACCCCGGCGTCCGCGTCCGGTCGGTCAAGTCCGGTCGCTACGAGAGCCTCGTCAATGGGGACGGCCGGGCCGCGTCGGTGGACGTCGGCGAGCTCTACGCCGACGAGGAGAGGCGTTTCTTGGTGTTCGTGGACGTGCCAGCAGCCGGCGCCGGGGAAGACGTCACAGAACTGATCAAGGTCAGCTGCACATACCGCGACACCGCGAGTCGGCAGCAGATGGTCGTCGCCGGCGAGCACGCCGTAGTGCAAAGACCAGTGGAGGTGGCCACCAACATGGAGCCGTCCATTGAGGTGGAGCGCGAGCGTTTCCGCGTGGAGGCAACCGAAGACATCGCGGCGGCGCAAGAAGCAGCCGAGCGCGGCGCGCACGCGGCGGCGAAGGCGATACTCGACCGCCGGCAGGAGGCGCTCGCCCGGTCGGCGCCGGGTCTCGCCGGCGACGCCAGGTGCGCGGCGCTGGTGTCGGAGCTGCGCGAGCTGAGCGCCCGCGTGGCGAGCAGGCGGGAGTACGAGCAGACCGGGCGCGCGTGCATGCTCGCCGGCATGAGCTCGCACGCACAGCAGCGCGCCACGTCGGTGCAGCTGTTTGGAGCGGCGGCGCCGACGTGGTCAATGCCGATGTGTGGATCGGCGGCGCCGCCATCTCTCTCTTTCGGGGGGTTTGGAGGGTTCGCGACGCCGGCGATGCGGAGCATGGTGGAGTCGTCCCGAAAGAGAAGAAAGGGCGGCGACGGAAGCTTAAGCTTTTTGGATCTGGTCCGAACTGAGGAAGAAGCCGGCAGCTCAGATGACGAGAAGGAGAACCTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027724