BGIOSGA027727

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Revision as of 07:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027727| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027727, complete gene.| tag = OJ1499_...")
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Gene Name

BGIOSGA027727

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027727, complete gene.

LocusTag

OJ1499_A07.24

Ensembl Transcript ID

BGIOSGA027727-TA

Ensembl Protein ID

BGIOSGA027727-PA

Length

6141

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1510749..1516889

Sequence Coding Region

1516380..1516889,1511659..1512029),complement(1510749..1511517

Genome Context

<gbrowseImage1> name=IndicaChromosome08:1510749..1516889 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:1510749..1516889 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGATGTTTCTTTGATCAGTTGCGCTGTCGGCATCATCTTCTTCTCCGCCGTTTGCTACCTGCCTACGGCTCCTGTCGCCGCCTTGTCCTTCAACTACACCAACTTCAATTCAAACAACCCGAGCATCGAATATGAAGGCAACGCCTCTTTCAGCGTCGGGTATATCGACATCAGCTTGAACGAAGCCAACGGCATGGGCAACAGCGCCGGACGGGTGTCCTACAAGCAGCCGGTGCAGCTCTGGGAGTGGGACGCCGCCACCGGCGAGGTGGCCAGCTTCACCACAACCTTCTCCTTCAACATCACGCCGAGCGATAGGAACAACAGGGGCGACGGGATGGCCTTATTCCTCGGCAGCTACCCATCGAAGTTACCAGACCGCGCCGGTGGCCACAACCTCGGCCTAACCAACCAAACAATCGGCAACGTCTCGACCGGTGACAAGAGGAAGACAAGAGGAAGCCCAGCCCAGACGATCCATGCGAGATCGGCGGCCCACGAGCAAAAGAGGAGGGAGGCCGAGGATGAGGAGAATGCGAGCACGGATAGTGACAATGGCGAGCCCATCACGGAGATCGAGGCGGGGACGGGGCCAAGGCGATTGCCATACTATGAGCTCGTCGAGGCGACCAAGAACTTCGCGGCGGAGGAGAAGCTTAGGCAAGGCGGCTTCGGCTCGGTGTACCGAGGCTACCTAAGAGAGCAGGGCCTCGCCGTCGCCATTAAACGCTTCGCCAAAGATTCCTCCAAGCAAGGGAAGGAGTACAAGTCAGAGATCAAGGTGATAAGCCGGTTGCGCCACCGCAATCTCGTGCAGCTCGTCGACGCAACGAGCTCCTCCTTGTCTATGAGCTCGTCCCCAACCGCAGTCTTGACGATCAAGATTGTTCTCGGGCTCGGATCAGCACTACTCTACCTCCACCAAGAGTGGGAACAATGTGTCGTGCACCGTGACATCAAGCCAAGCAACGTCATGTTGGATGAATCCTTCAATGCCAAGCTAGGTGACTTCGGGCTCGCGAGGCTCATCGACCACACCATCGGTATAAAGACGATGACCGCCATGTCAGGAATGCTGGGCTACCTTGACCCTGAATGTGTGATCACCGGTAGAGCGAGTGCCGAGTCCGACGTTTACAGTTTTGGCATTGTCCTACTGGAGGTGGCATGTGGGAGGAGACTGATGAGCCTACTAGATAGCCATAATAATGGCGTCTTCCGACTGGTTGAGTGGGCCTGGGTTTTGTATGGCAAGGGAGATGTTCTCATGGCCGCCGACGAGCGTCTCAATGGCGACTACGATTCTGCGGAGATGGAGCGTGTCATCACTCTCGGGCTCTGGTGCGTGCACCCTGATCCAAGCGCGCGACCGTCTATCAGAGATGCCATGACCATACTCCAATCGAGTGGAGGCCAGCTGCCGGTGCTACCGGCCAAGATGCCCGTGCCAACGTACGCGCCGCCGATGGCCTTGTTTCATGGGCTCTTTGCGTCATCTACAGGGATGTCGTCGTCATCAGGTGTGACGCAGTCGTCGTCCATATCGACGACGAGTGGCCATGCTACTCACACCTCGTGGTCCTCGGTTCCCTCCGATTCAACCAGTTCGAAGGACTCGTCTTCATTGCTCAAGCATCAGTGCTAG</cdnaseq>

Protein Sequence

<aaseq>MADVSLISCAVGIIFFSAVCYLPTAPVAALSFNYTNFNSNNPSIEYEGNASFSVGYIDISLNEANGMGNSAGRVSYKQPVQLWEWDAATGEVASFTTTFSFNITPSDRNNRGDGMALFLGSYPSKLPDRAGGHNLGLTNQTIGNVSTGDKRKTRGSPAQTIHARSAAHEQKRREAEDEENASTDSDNGEPITEIEAGTGPRRLPYYELVEATKNFAAEEKLRQGGFGSVYRGYLREQGLAVAIKRFAKDSSKQGKEYKSEIKVISRLRHRNLVQLVDATSSSLSMSSSPTAVLTIKIVLGLGSALLYLHQEWEQCVVHRDIKPSNVMLDESFNAKLGDFGLARLIDHTIGIKTMTAMSGMLGYLDPECVITGRASAESDVYSFGIVLLEVACGRRLMSLLDSHNNGVFRLVEWAWVLYGKGDVLMAADERLNGDYDSAEMERVITLGLWCVHPDPSARPSIRDAMTILQSSGGQLPVLPAKMPVPTYAPPMALFHGLFASSTGMSSSSGVTQSSSISTTSGHATHTSWSSVPSDSTSSKDSSSLLKHQC</aaseq>

Gene Sequence

<dnaseqindica>1..510#4861..5231#5373..6141#ATGGCCGATGTTTCTTTGATCAGTTGCGCTGTCGGCATCATCTTCTTCTCCGCCGTTTGCTACCTGCCTACGGCTCCTGTCGCCGCCTTGTCCTTCAACTACACCAACTTCAATTCAAACAACCCGAGCATCGAATATGAAGGCAACGCCTCTTTCAGCGTCGGGTATATCGACATCAGCTTGAACGAAGCCAACGGCATGGGCAACAGCGCCGGACGGGTGTCCTACAAGCAGCCGGTGCAGCTCTGGGAGTGGGACGCCGCCACCGGCGAGGTGGCCAGCTTCACCACAACCTTCTCCTTCAACATCACGCCGAGCGATAGGAACAACAGGGGCGACGGGATGGCCTTATTCCTCGGCAGCTACCCATCGAAGTTACCAGACCGCGCCGGTGGCCACAACCTCGGCCTAACCAACCAAACAATCGGCAACGTCTCGACCGGTGACAAGAGGAAGACAAGAGGAAGCCCAGCCCAGACGATCCATGCGAGATCGGCGGCCCACGAGCAAGTATGTGTCGAGTGAGTGGACCCGGTAGCTGTCGACCGGGCCACTGTCAGAGAGGGAGCGAGATCTTTTGGCACATCGCTATATAAGATCGGCAGAGTAGAGAGAGAAGGAATCGAACATTGTAGAAACAACTAAATTCCCGATTCAATTCAAATCTCTCTCTCTGTTCTATTGCTTCCTCTTTTCTTCCTCTGTTTCTCTTCTCAATTCACGAATTCCTCTTCAAATTCCCACGGTTTCGTCATCGTCTCGGCGTGAATTCCACAAGTGCCGTGACATTTGGTATCAGAGCAGCGATCCTGGAGAAACCAAGGTACACTTCTCGTTTGCAATCGCAGGTTGAGGCAATGGAGAAGCAGAATCTCGATTTCGGCAAGTTACTCGGCGACATCCAGGAGTCGCTGGTGGCGTTGAACAACAAGCAGGCGGAGATGCAGGTGGCGGTGGCGAAGTTGGACGAAGGGGTTAGTGGATGGCGACCCCAAGTTGAAGCCGCGATCAAGGACTTGCGTGCTGAGGTTGACGAACTTCGGTAGCAGCATGATGCCGCCAACAAGGGAAAGCAAGCTCCATCAGCGGCACTTTCCCCTCGGGTCCCGTTGACGGGCGAGGAAAGAAAGGTGCCGTTGTTGCCGACTCCTGCACCATCATATCAGTTGGGCGCAACAGATCATGTTGTTGAGCAAACGTTAATGGCAGTTTCACTACAGGCTGTGCAGGGATCTGAAATTGGTGGTTGTATGAGAATGCTGGGGCAAATCCAAAGCAAAGAAATCTTGATTTTAGTCGACTCAGGCAGCTCTGCCAGTTTCATCAGTAAAAGGGTGGCAAGCAGTCTTATAGGGGTTCTAGAGCAGCCTGTGCATGTGCAAGTTAAGGTGGCTGGGGGAGCAATGTTACATTGTTGTTCTGAGATTCTGAATTGTGAATGGACCACTCAAGGACATGTGTTCTTTACTAATCTGAAGGTTCTGGAATTGAACAACTACGACATGATTTTGGGCATGGATTGGTTGATGCAGCACAGTCCAATGACAGTGGATTGGACCACAAAATCTCTGATAATTGCTTGTGCAGGAACTCAGATTCAGTTACATGGTGTAAGGTCTGATACTGAGCAATGTGCCCACATAAGTTCCAGGCAACTTAGGGAACTTAATGACAGAACAACAGTGTCTAACTTAGTCCAATTTTGTTCAGTTTTCGCCTTGGAGCACCAAGAGCAGATTCCTAATGTGGTGCAGACAGTACTGACAGAGTTTTCTTCAGTTTTTGATGAACCCAAGGGGTTACCACCAATCAGACAATTTGACCATACTATTCCTTTGCTGCCAGGAGCTAGGCCAGTCAATGTGAGACCCTATCGATACACTCCTGTCCAAAAGAATGAGATTGAAAGTCAAGTGCAAGAGATGTTGAGTAAAGGGATAATTCAACCATGTTCAAGTCCTTTTTCATCACCCGTATTACTTGTTAAAAAGAAGGACGGTTCATGGAGGTTTTGTGTGGATTATAGACATCTTAATGCCATAACAGTGAAGAATAAGTATCCTTTGCCTGTGATAGATGAACTATTGGATGAACTTGCGGGAGCTCAATGGTTTTCTAAGTTGGACTTGCGCTCCGAATATCACCAAATCAGAATGCATCCAGATGATGAGCATAAAACTGCTTTTCAAACCCATCACGGTCACTTTGAGTTCAGAGTGCTTCCTTTTGGTTTGACTAGTGCACCGGCAACTTTTCAAGGAGTCATGAACAGTGTGCTTGCTACCTTACTCAGGAGGTGTGTGCTTGTATTCGTGGATGACATTTTGATATACAGCAAATCTTTAGAAGAGCATGTGCAGCATTTGAAAACAGTATTTCAGATTTTGCTTAAACACCAATTGAAGGTTAAGAGGACTAAGTGTTCTTTTGCACAACAAGAATTAGCATATCTTGGACATATAATTCAACCTAATGGTGTTTCCACAGACCCTGAGAAGATTCAAGTTATTCAACATTGGCCAGCACCCACTTCTGTAAAAGAATTACGTAGCTTTTTAGGTCTCTCAGGATACTACAGGAAATTTGTGCGCAATTATGGCATTCTCAGTAAACCTCTTACAAATTTGCTTCGCAATGGTCAGCTCTATATTTGGACTGCTGAAACTGAGGATGCTTTTCAAGCTTTGAAACAAGCGCTCATCACAGCTCTAGTCCTTGCTATGCCAGATTTCCAAACTCCTTTTGTGGTTGAGACTGATGCATCTGACAAGGGCATTGGTGCAGTGTTAATGCAAAATAATCATCCCCTCGCTTTCTTAAGCCGAGCTCTTGGACTGCGACATCAGGGACTCTCTACTTATGAAAAGGAAAGTTTGGCCATAATGCTTGTGGTAGATCACTGGCGGCCATATTTACAGCATGATGAATTTTTCATTCGAACTGATCATCGCAGTTTGGCATTTCTTACTGAACAGCGTCTCACCACTCCCTGGCAGCACAAGGCTCTTACCAAACTCTTGGGGCTTCGTTATAAGATTATTTTTAAGAAGGGGGTTGACAACAACGTAGCAGATGCATTATCTCGTTATCCAGGCTCTGATCAGGTGGAACTCTCAGCTTTATCAGTTGCAGTTCCAGAGTGGATCAATGAAATTGTGGCCGGTTATTCCTCTGATCCCGATGCCTGCAGCAAGGTACAAACTCTCTGTATCAATTCTGGAGCAGTACCAAATTTTTCTCTGCACAATGGAGTGCTTTATTTTCAGAACAGACTTTGGGTTGGTCACAATGTAGAAGTTCAACAGAAAATTCTTGCTAATCTTCACACAACGGCAGTTGGAGGCCATTCGGGAATACAAGTCACTTATCAGCGCGTTAAACAGCTGTTTGCTTGGCCTCGCCTTCGTGCCACTGTTGTTCAGTATGTGCAAGCTTGTTCTGTTTGCCAACAAGCAAAATCGGAGCATGTGAAGTATCCGGGAATGCTTCAACCTCTCCCTGTACCTGACCATGCATGGCAAATTGTCTCTCTGGATTTCGTGGAAGGCCTTCCTAAGTCGGCTTCTTTCAATTGCATTCTTGTGGTGGTCGACAAATTCTCTAAATACAGTCATTTTGTTCCATTGACTCATCCTTTCTCTGCCTTGGATGTGGCCGAAGCATATATGCAACATATCCATCGACTTCACGGCTTGCCTCAGTCTTTGATTTCTGACCGTGATCGCATTTTCACTAGTACATTGTGGACTACTCTATTCAAGTTAGCCGGCACTCAACTCCGAATGAGTTCCTCTTACCATCCTCAGACTGACGGCCAGACTGAACGTGTGAATAAATGCCTAGAGACATTCCTCCGTTGTTTTGTCCATGCCTGTCCTTCACAGTGGAGTCGCTGGCTTGCGTTGGCAGAATATTGGTACAACACGTCCTTTCACTCTGCTCTGGGCACCACTCCCTTTGAAGTACTGTATGGACATAAGCCTCGCTACTTTGGTCTTTCAGCTTCTGCTGCTTGTCGATCAGACGATCTTGTTGAGTGGCTGCATGAACGTGAGAAGATGCAAGCTTTGATCAGAGATCATCTTTTGCGTGCTCAGACTCGCATGAAGCAACAGGCTGATCAGCACCGTTCAGAACGCTCTTTTGCAGTGGGCGATTGGGTTTATTTGAAGCTTCAGCCCTTCGTTCAGCAGTCGGTGGTTACCAGGGCTAATCGTAAACTTTCGTTTCGATTTTATGGACCATTTCAGGTGCTTGACAAGGTTGGAGCGGTGGCATATCGCTTGGATCTGCCAACTTCCAGTTTGATCCACCCAATTGTTCATGTTTCCCAACTAAAAAAGGCCTTGGCTCCAACGGAACAAGTTCATTCTCCACTTCCTGTTCTGGATCCGACAAATGTTACTCACGTTTGTCCAGCGCAGATTTTGGATCATCGCTTCATCCGCAAGGGTTCCAAGATGGTGGAGCAAGTACAGATTCGTTGGACCGGCGATGCACCAGCAGCAACCACCTGGGAGAATCCGCGCGAGCTCCGTCGCCGTTTTCCTGCGGCACCAGCTTGGGGGCAAGCTGGAACTCAAGGAGGGGGGAATGTCATGCCAGCGCCTATAGCATCAGCGGCAAGACAAGAAGCCCAGCCCAGATGATCCATGCGAGATCGCGGCCCACGAGCAAGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGCCACGTCGGTGCAACACTGCTCGTCGTGCTGCTCTTCACCATGGCAACTATCATCGTACGACGACGTTGGATCAAGAAGAGGAGGGAGGCCGAGGATGAGGAGAATGCGAGCACGGATAGTGACAATGGCGAGCCCATCACGGAGATCGAGGCGGGGACGGGGCCAAGGCGATTGCCATACTATGAGCTCGTCGAGGCGACCAAGAACTTCGCGGCGGAGGAGAAGCTTAGGCAAGGCGGCTTCGGCTCGGTGTACCGAGGCTACCTAAGAGAGCAGGGCCTCGCCGTCGCCATTAAACGCTTCGCCAAAGATTCCTCCAAGCAAGGGAAGGAGTACAAGTCAGAGATCAAGGTGATAAGCCGGTTGCGCCACCGCAATCTCGTGCAGCTCGTCGACGCAACGAGCTCCTCCTTGTCTATGAGCTCGTCCCCAACCGCAGTCTTGACGTCCATCTCCATGGCAATGGCACCTTCCTTACTTGGCCAATGAGGTTATTAATTCTCGGCGTTAACTTTCTCATCTCAACTGTTTCGATGAGTGTCAAATCTAATTCTATTTTTATCTTGCTTAATTGGTTGTTTCCACAGGATCAAGATTGTTCTCGGGCTCGGATCAGCACTACTCTACCTCCACCAAGAGTGGGAACAATGTGTCGTGCACCGTGACATCAAGCCAAGCAACGTCATGTTGGATGAATCCTTCAATGCCAAGCTAGGTGACTTCGGGCTCGCGAGGCTCATCGACCACACCATCGGTATAAAGACGATGACCGCCATGTCAGGAATGCTGGGCTACCTTGACCCTGAATGTGTGATCACCGGTAGAGCGAGTGCCGAGTCCGACGTTTACAGTTTTGGCATTGTCCTACTGGAGGTGGCATGTGGGAGGAGACTGATGAGCCTACTAGATAGCCATAATAATGGCGTCTTCCGACTGGTTGAGTGGGCCTGGGTTTTGTATGGCAAGGGAGATGTTCTCATGGCCGCCGACGAGCGTCTCAATGGCGACTACGATTCTGCGGAGATGGAGCGTGTCATCACTCTCGGGCTCTGGTGCGTGCACCCTGATCCAAGCGCGCGACCGTCTATCAGAGATGCCATGACCATACTCCAATCGAGTGGAGGCCAGCTGCCGGTGCTACCGGCCAAGATGCCCGTGCCAACGTACGCGCCGCCGATGGCCTTGTTTCATGGGCTCTTTGCGTCATCTACAGGGATGTCGTCGTCATCAGGTGTGACGCAGTCGTCGTCCATATCGACGACGAGTGGCCATGCTACTCACACCTCGTGGTCCTCGGTTCCCTCCGATTCAACCAGTTCGAAGGACTCGTCTTCATTGCTCAAGCATCAGTGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027727