BGIOSGA027728

From RiceWiki
Revision as of 07:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027728| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027728, complete gene.| tag = OJ1126_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027728

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027728, complete gene.

LocusTag

OJ1126_D10.8

Ensembl Transcript ID

BGIOSGA027728-TA

Ensembl Protein ID

BGIOSGA027728-PA

Length

2129

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1504628..1506756

Sequence Coding Region

1505414..1506756,1504628..1505297

Genome Context

<gbrowseImage1> name=IndicaChromosome08:1504628..1506756 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:1504628..1506756 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGGCGTCCTCATGACAAAACCGTTCATGGCTGCTCTAGCCTGCTTGCTCGTCATGCCTAGCGTCGTCGCTACCACTGTATCTTTCAACTACTCCAGCTTCAGCAACGCGAGCAAGAACATCACCCTCCAGGGCAGCGCGGCGCTCGCCGGCGCCGCCGCCGAATGGATCGAGCTCACCAAAGGCAAAGGGAACAACCTGTCGAGCGGCGGCACCATGGGCCGGATGGTGTACACGCCGCCGGTGCAGCTCTGGGACGCCGCCACCGGCGAGGTTGCCAGCTTCACCACGCGCTTCTCCTTCAACATCACCCCGAAAAACAAGAGCAACAAGGGCGACGGGATGACCTTCTTCCTCGTCAGCTACCCGTCGAGGATGCCGTACATGGGCTACGGCGGCGCCCTCGGCCTCACTAGCCAGACCTTCGACAACGCCACCGCCGGCGACCGGTTCGTCGCCGTCGAGTTCGACACCTACAACAACTCCTTCCTAGACCCCGACGCCACCTACGACCACATCGGCATCGACGTCAACGCCCTCCGGTCAGTGAAGACCGAATCCCTGCCTAGCTTCATCCTCATCGGCAACATGACCGCCATCGTCGACTACAACAGCAATTCGAGCATCATGTCGGTGAAGCTATGGGCAAATGGCTCAACAACGCCTTACAACCTCAGCTCCAAGATTGATCTCAAGAGCGCCTTGCCGGAGAAGGTCGCCGTTGGCTTCTCGGCGGCGACGGGTTCATCCTTTGAGCAGCATCAGCTGCGTTCTTGGTACTTCAACTTGACGTTGGAGCAGAAGCAGCCGACAGGACAACATTCGCGTGGCGGAGTTGTAGCGGGAGCCACCGTCGGTGCAATTCTGTTCATCGTGCTCCTCTTCACCATGGTAGCAATCCTCGTACGACGACGTCAGAGAAAGAAGATGAGGGAGGAAGAGGAGGACGACTCGGAAGGCGATCCCATCGTGGAGATCGAGATGGGGACGGGGCCGAGGCGGTTCCCATACCACATACTTGTCAACGCGACAAAGAGCTTTGCGGCGGAGGAGAAGCTTGGGCAAGGCGGTTTTGGCGCGGTGTACCGTGGCAATCTGAGAGAGCTCGGCATAGACGTTGCCATAAAAAGGTTCGCCAAAGACTCCTCCAAGCAAGGGAGGAAGGAGTACAAGTCGGAGATCAAGGTGATAAGTCGGCTGCGCCACCGCAATCTCGTGCAGCTCATCGGTTGGTGCCACGGTCGCAATGAGCTCCTCCTCGTGTACGAGCTCGTTTCCAACCGCAGCCTTGATGTCCATCTCCATGGCAATGGTACCTTCCTCACATGGCCAATGAGGATCAACATTGTTCTTGGGCTTGGGAATGCACTGCTCTACCTCCATGAGGAGTGGGAGCAATGCGTTGTGCACCGTGACATCAAGCCAAGCAACGTCATGTTGGATGAATCCTTCAATACGAAGCTAGGTGACTTTGGCCTCGCAAGGCTCATTGACCATGCTATTGGAGCACAAACGATGACCCACCCCTCAGGTACACCGGGCTATGTCGACCCTGAATGTGTGATCACAGGCAAAGCAAGTGCTGAATCTGATGTGTACAGTTTTGGCATTGTTCTTCTGGAAGTGGCATGTGGAAGGAGACCAATGAACCTACTGGATGACCAGAATAATGGCCTCTTCCGACTAGTCGAATGGGTATGGGACCTTTACGGCCAGGGAGCCGTTCTCAAAGCGGCCGATGAGCGCCTTAACGGTGACTACGACGCGACAGACATGGAGTGTGTCTTGGTTGTTGGGCTCTGGTGTGCTCACCCAGACCGATGCGCTCGTCCATCTATTAGAGTTGCCATGGCAGTTCTCCAATCCAATGGACCACTACCGATGCTACCAACCAAGATGCCCGTGCCAACATATGGGCCGCCGGTGGCCTCATCAGAGGGCCAGCACTCGGCGTCGACAGGAATATCGTCCTCAAGTTTGACACAAACATCAATCACACCTCGTTAG</cdnaseq>

Protein Sequence

<aaseq>MAAGVLMTKPFMAALACLLVMPSVVATTVSFNYSSFSNASKNITLQGSAALAGAAAEWIELTKGKGNNLSSGGTMGRMVYTPPVQLWDAATGEVASFTTRFSFNITPKNKSNKGDGMTFFLVSYPSRMPYMGYGGALGLTSQTFDNATAGDRFVAVEFDTYNNSFLDPDATYDHIGIDVNALRSVKTESLPSFILIGNMTAIVDYNSNSSIMSVKLWANGSTTPYNLSSKIDLKSALPEKVAVGFSAATGSSFEQHQLRSWYFNLTLEQKQPTGQHSRGGVVAGATVGAILFIVLLFTMVAILVRRRQRKKMREEEEDDSEGDPIVEIEMGTGPRRFPYHILVNATKSFAAEEKLGQGGFGAVYRGNLRELGIDVAIKRFAKDSSKQGRKEYKSEIKVISRLRHRNLVQLIGWCHGRNELLLVYELVSNRSLDVHLHGNGTFLTWPMRINIVLGLGNALLYLHEEWEQCVVHRDIKPSNVMLDESFNTKLGDFGLARLIDHAIGAQTMTHPSGTPGYVDPECVITGKASAESDVYSFGIVLLEVACGRRPMNLLDDQNNGLFRLVEWVWDLYGQGAVLKAADERLNGDYDATDMECVLVVGLWCAHPDRCARPSIRVAMAVLQSNGPLPMLPTKMPVPTYGPPVASSEGQHSASTGISSSSLTQTSITPR</aaseq>

Gene Sequence

<dnaseqindica>1..1343#1460..2129#ATGGCCGCCGGCGTCCTCATGACAAAACCGTTCATGGCTGCTCTAGCCTGCTTGCTCGTCATGCCTAGCGTCGTCGCTACCACTGTATCTTTCAACTACTCCAGCTTCAGCAACGCGAGCAAGAACATCACCCTCCAGGGCAGCGCGGCGCTCGCCGGCGCCGCCGCCGAATGGATCGAGCTCACCAAAGGCAAAGGGAACAACCTGTCGAGCGGCGGCACCATGGGCCGGATGGTGTACACGCCGCCGGTGCAGCTCTGGGACGCCGCCACCGGCGAGGTTGCCAGCTTCACCACGCGCTTCTCCTTCAACATCACCCCGAAAAACAAGAGCAACAAGGGCGACGGGATGACCTTCTTCCTCGTCAGCTACCCGTCGAGGATGCCGTACATGGGCTACGGCGGCGCCCTCGGCCTCACTAGCCAGACCTTCGACAACGCCACCGCCGGCGACCGGTTCGTCGCCGTCGAGTTCGACACCTACAACAACTCCTTCCTAGACCCCGACGCCACCTACGACCACATCGGCATCGACGTCAACGCCCTCCGGTCAGTGAAGACCGAATCCCTGCCTAGCTTCATCCTCATCGGCAACATGACCGCCATCGTCGACTACAACAGCAATTCGAGCATCATGTCGGTGAAGCTATGGGCAAATGGCTCAACAACGCCTTACAACCTCAGCTCCAAGATTGATCTCAAGAGCGCCTTGCCGGAGAAGGTCGCCGTTGGCTTCTCGGCGGCGACGGGTTCATCCTTTGAGCAGCATCAGCTGCGTTCTTGGTACTTCAACTTGACGTTGGAGCAGAAGCAGCCGACAGGACAACATTCGCGTGGCGGAGTTGTAGCGGGAGCCACCGTCGGTGCAATTCTGTTCATCGTGCTCCTCTTCACCATGGTAGCAATCCTCGTACGACGACGTCAGAGAAAGAAGATGAGGGAGGAAGAGGAGGACGACTCGGAAGGCGATCCCATCGTGGAGATCGAGATGGGGACGGGGCCGAGGCGGTTCCCATACCACATACTTGTCAACGCGACAAAGAGCTTTGCGGCGGAGGAGAAGCTTGGGCAAGGCGGTTTTGGCGCGGTGTACCGTGGCAATCTGAGAGAGCTCGGCATAGACGTTGCCATAAAAAGGTTCGCCAAAGACTCCTCCAAGCAAGGGAGGAAGGAGTACAAGTCGGAGATCAAGGTGATAAGTCGGCTGCGCCACCGCAATCTCGTGCAGCTCATCGGTTGGTGCCACGGTCGCAATGAGCTCCTCCTCGTGTACGAGCTCGTTTCCAACCGCAGCCTTGATGTCCATCTCCATGGCAATGGTACCTTCCTCACATGGCCAATGAGGTAATTAATTAACTCTCATTAATATTTCAGATTTTATTTTTTTTATTTCTTGCAATGTGCAATCAACAAATGTCAATTGAAATTCAACTGATCAACTACCTTGGATATTGTCATAGGATCAACATTGTTCTTGGGCTTGGGAATGCACTGCTCTACCTCCATGAGGAGTGGGAGCAATGCGTTGTGCACCGTGACATCAAGCCAAGCAACGTCATGTTGGATGAATCCTTCAATACGAAGCTAGGTGACTTTGGCCTCGCAAGGCTCATTGACCATGCTATTGGAGCACAAACGATGACCCACCCCTCAGGTACACCGGGCTATGTCGACCCTGAATGTGTGATCACAGGCAAAGCAAGTGCTGAATCTGATGTGTACAGTTTTGGCATTGTTCTTCTGGAAGTGGCATGTGGAAGGAGACCAATGAACCTACTGGATGACCAGAATAATGGCCTCTTCCGACTAGTCGAATGGGTATGGGACCTTTACGGCCAGGGAGCCGTTCTCAAAGCGGCCGATGAGCGCCTTAACGGTGACTACGACGCGACAGACATGGAGTGTGTCTTGGTTGTTGGGCTCTGGTGTGCTCACCCAGACCGATGCGCTCGTCCATCTATTAGAGTTGCCATGGCAGTTCTCCAATCCAATGGACCACTACCGATGCTACCAACCAAGATGCCCGTGCCAACATATGGGCCGCCGGTGGCCTCATCAGAGGGCCAGCACTCGGCGTCGACAGGAATATCGTCCTCAAGTTTGACACAAACATCAATCACACCTCGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027728