BGIOSGA027748

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Revision as of 07:48, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027748| Description = 40S ribosomal protein S13| Definition = Oryza sativa Indica Group BGIOSGA027748, complete gene.| tag = XD3| tid = BG...")
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Gene Name

BGIOSGA027748

Description

40S ribosomal protein S13

Definition

Oryza sativa Indica Group BGIOSGA027748, complete gene.

LocusTag

XD3

Ensembl Transcript ID

BGIOSGA027748-TA

Ensembl Protein ID

BGIOSGA027748-PA

Length

1465

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1096515..1097979

Sequence Coding Region

1097957..1097979,1097780..1097852),complement(1097524..1097662,1097248..1097434),complement(1096515..1096548

Genome Context

<gbrowseImage1> name=IndicaChromosome08:1096515..1097979 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:1096515..1097979 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGCGCATGCACAGCCGCGGGAAGGGTATCTCGTCGTCGGCGCTGCCGTACAAGAGGACTCCCCCGAGCTGGCTCAAGACCGCCGCCTCCGATGTGGAGGAGATGATCATGAAGGCCGCGAAGAAGGGTCAGATGCCGTCGCAGATCGGCGTGGTGCTCCGTGACCAGCACGGAATCCCCCTCGTCAAGAGCGTCACCGGCAGCAAGATCCTCCGCATCCTCAAGGCCCACGGGCTTGCCCCGGAGATCCCGGAGGACCTCTACTTCTTGATCAAGAAGGCTGTTGCTATTAGGAAGCACTTGGAGAGGAACAGGAAGGACAAGGACTCCAAGTTCAGGCTTATTCTTGTTGAGAGCAGGATCCACCGCCTCGCCCGCTACTATAAGCGCACAAAGAAGCTCCCACCCACCTGGAAGTATGAGTCAACCACGGCCAGCACTCTGGTGGCCTAA</cdnaseq>

Protein Sequence

<aaseq>MGRMHSRGKGISSSALPYKRTPPSWLKTAASDVEEMIMKAAKKGQMPSQIGVVLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYESTTASTLVA</aaseq>

Gene Sequence

<dnaseqindica>1..23#128..200#318..456#546..732#1432..1465#ATGGGGCGCATGCACAGCCGCGGGTAATCCCCCTCTCTACCTCTTCTCCGGCGTGTAATTGTTTGGCTCTAGTGGTTTCTCCTCTCTGGTCTAATGGCGGCGGCTGCGCTGCGGTGCGGTGGTGCAGGAAGGGTATCTCGTCGTCGGCGCTGCCGTACAAGAGGACTCCCCCGAGCTGGCTCAAGACCGCCGCCTCCGATGTGGGTGCCTTCTCCTTCCTCTCCCTCTCTCGATTGGCTCTCTTCCATTTGGTTCGATTTGGGGGGTGGGTGGTTTCCGGATTCTGACTCCGTTGGGTTGGTTGGTTCGTATCGTAGGTGGAGGAGATGATCATGAAGGCCGCGAAGAAGGGTCAGATGCCGTCGCAGATCGGCGTGGTGCTCCGTGACCAGCACGGAATCCCCCTCGTCAAGAGCGTCACCGGCAGCAAGATCCTCCGCATCCTCAAGGCCCACGGTGAGATCTCCCTCCCTGTGATTTCTTCCATTGATTGATGCACCGTGCGTTTGTGTGCTGATGATTTGTGTGGTTTGATTGGTGGGTAGGGCTTGCCCCGGAGATCCCGGAGGACCTCTACTTCTTGATCAAGAAGGCTGTTGCTATTAGGAAGCACTTGGAGAGGAACAGGAAGGACAAGGACTCCAAGTTCAGGCTTATTCTTGTTGAGAGCAGGATCCACCGCCTCGCCCGCTACTATAAGCGCACAAAGAAGCTCCCACCCACCTGGAAGTAGTAAGTCACATTGCCCACATGGCCATTTCCTCTTGTTGTTCCTACAATTCTTTGATTATGCTATGTATGTAGTACGATTTTAAAGTAGTCTGTGCTGTGAAAACTAGAAATGGTCGTAGATAGTTGTACTTAATTAATGGGCATAAGCAGTGTGTGATGATGGTTACCTGTGAGACCTGATCACACTTTCCGTGGATTCGTATTGCCTGATGAATCCATGTGGAATGGTTCTTGAATAACTAGTTAGCTGTTCCTTTTGTGTGATATTATGGCCTGATTACTATTGAGAATGACATAATAACATGAGTTGTGAGACTACTATGAGTTCACTTAGGCCAATCTTTTGTGAAATGATGTTGGCTACACTATAGATATATCAGAATCAACAAGTATAATAGAGTACATGTTTTTCCAAGCTAAATTTCACTTGCTATATAATCTGTTGTCTTAGGTGTGCTGTCTGCATCTATGGTGCATTCTCGTTTAGCCCAACTTATACACTAACAGTGATTTCCTTTCTTAGTTCTTTTTTTTACTAAATTTGTCTCTTTGGAATACTGGCCTAATTAACCTGGTCACTTTGTTAATTGCTTTTTATCTCTTAATTTAGTTAAAGCTATTTACAACATGTGTATTTGATAACTAGTTGATTCTCGTAATCCCCCTTAATAGCTGCTAACAACAATTATTTTTATGCAGTGAGTCAACCACGGCCAGCACTCTGGTGGCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027748