BGIOSGA027769

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Revision as of 07:48, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027769| Description = BGIOSGA027769| Definition = Oryza sativa Indica Group BGIOSGA027769, complete gene.| tag = | tid = BGIOSGA027769-TA|...")
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Gene Name

BGIOSGA027769

Description

BGIOSGA027769

Definition

Oryza sativa Indica Group BGIOSGA027769, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA027769-TA

Ensembl Protein ID

BGIOSGA027769-PA

Length

4983

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:680018..685000

Sequence Coding Region

684971..685000,684622..684738),complement(684228..684284,684042..684112),complement(683433..683533
,683216..683319),complement(683061..683114,682917..682972),complement(682781..682819
,682565..682693),complement(682278..682496,682071..682141),complement(681898..681970
,681637..681698),complement(681110..681507,680018..680545

Genome Context

<gbrowseImage1> name=IndicaChromosome08:680018..685000 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:680018..685000 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAAGTTCAGAGTTGGAGGAAACCAAGGCAGTCCTGCACATGGATTGTGAAAAGCCACCAGCAATATCTTGGGAGAGGACATTTGATGATGAAGGAAAGAAGGTTGCAATGTTTAGCATGACCTTGAATGACATGATGGCAATTGTGCCGTTGATGATTAAAATGCTGGGACTAAACCTGAAAGACAATGCAAAAGGCCTGGCTTCAGTGTATGATCCACTGAAGAAATGGATGGACAACTGCTACCGCGGTGTACCCCTCGGTGGGATTGGGGGAATCGATAAAGCTGGCATTGGATCCTGGGACTGGAAGCTGAAAGAGAAGAATTGCACTTACCATGGCTTGTTCCCAAGATCATGGACAGTATACAATGGTGAACCTGACCCTGAAATTAAAATAACTTGCCGTCAGATATCACCGTTCATTCCTCACAACTACAAGGAGAGCAGCTTCCCTGTTGCAGTTTTCACTTTTACGTTACACAATTCTGGAAGCACACCTGCAGATGTAACACTGCTCTTCACATGGGCAAATTCGGTTGGAGGGAAATCTGAACTGACCGGGAATCATAAGAACTCCAGAATGACAGCTCGCGACGGCGTCCATGGCGTCCTCCTCCATCACAGGACGGCGGATGGGCGCCCTCCGGTGACGTTCGCGATCGCGTCGCGGGAGACCGACGGCGTCCGCGTCACCGGCTGCCCGCGCTTCACGATGGGACCATCCAACTCCGGCGATGTCACGGCGAAGGACATGCTGACGAACACTGCATGTTCGCGGCGAACAGAATGTTTCGTTCTTCGGGGACGCCAATGCGGCGTCGGCGGCGACGGGAGCGTCGAGGCCCGGGTCGTCCATCGGAGCGCCGGTGGCGGCGACGACGACGGTGGCGGCGGTGGCGCGCGCGCGGTGTCGTTCGCGCTGTCGTGGTCGTGCCCCGAGGTGAAGTTCCCGGCGGGGAGAACCTACCACAGGAGGTACACCAAGTTCCATGGCACCGATCGCGACGCGGCTGCTGAGCGCCTGGCCCACGATGCTCTTCTTGAACACATGAAATGGGAGTCCCAGATCGAGGAGTGGCAGAGGCCTATTCTGCAGGACAAGAGCCTACCTGAATGGTATCCAATTACACTGTTCAACGAGCTCTACTACCTCAACGCTGGAGGCACCATTTGGACAGATGGGCAGCCTCCGAAGAACACCAGCCTTTCGTCAGCGACTGAGCCGTTCAACCTCGACACGTTCAGTACAGTCGCCAACGGCGGCAGCGCGGTCGACGGCATTTTGAGCACGGTGGCGGCGGCGGCGGCGCGGTCGAACACGGCGGCGGCGGCGGCGGCGGCGATGGGCACGGCGCTGCTGCGCGACGGCGAGGAGAACGTGGGGCAGGTGCTGTACCTGGAGGGGATGGAGTACAACATGTGGAACACCTACGACGTCCACTTCTACGCCTCCTTCGCCCTCCTCTCCCTCTTCCCCGAGCTCGAGCTCAACCTCCAGCGCGACTTCGTCCGCGGCGTCCTCCTCCACGACCCCTGCCTCCGCCGCACCCTTGACGGCGCCACCGTGGCGCGCAAGGTGTTGGGAGCGGTGCCACATGACATGGGGCTGAACGACCCGTGGTTCGAGGTGAACGCGTACATGCTGCACGACCCGGTGAGGTGGAAGGACCTCAACCCAAAGTTCGTGCTGCAGGTGTACCGCGACGTGGTGGCGACGGGGAACGCCGGCTTCGCGGAGGCGGCGTGGCCGGCGGTGTACCTGGCCATGGCGTACATGGACCAGTTCGACCGCGACGGCGACGGGATGGTCGAGAACGAGGGCCGCCCCGACCAGACCTACGACCTGTGGTCGGTGTCCGGCGTCAGCGCCTACACCGGCGGCCTCTGGGTGGCGGCGCTCCAGGCCGCCGCGGCCATGGCGGGCATCGTCGGCGACGGCGCCGCCGAGGCCTACTTCCGGGGGAGGTACCACCGCGCCAGGCGCGTGTACACCGACGAGCTCTGGAACGGCGGCTACTTCAACTACAGACAACAGCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATTGCTTTGGTGA</cdnaseq>

Protein Sequence

<aaseq>MGSSELEETKAVLHMDCEKPPAISWERTFDDEGKKVAMFSMTLNDMMAIVPLMIKMLGLNLKDNAKGLASVYDPLKKWMDNCYRGVPLGGIGGIDKAGIGSWDWKLKEKNCTYHGLFPRSWTVYNGEPDPEIKITCRQISPFIPHNYKESSFPVAVFTFTLHNSGSTPADVTLLFTWANSVGGKSELTGNHKNSRMTARDGVHGVLLHHRTADGRPPVTFAIASRETDGVRVTGCPRFTMGPSNSGDVTAKDMLTNTACSRRTECFVLRGRQCGVGGDGSVEARVVHRSAGGGDDDGGGGGARAVSFALSWSCPEVKFPAGRTYHRRYTKFHGTDRDAAAERLAHDALLEHMKWESQIEEWQRPILQDKSLPEWYPITLFNELYYLNAGGTIWTDGQPPKNTSLSSATEPFNLDTFSTVANGGSAVDGILSTVAAAAARSNTAAAAAAAMGTALLRDGEENVGQVLYLEGMEYNMWNTYDVHFYASFALLSLFPELELNLQRDFVRGVLLHDPCLRRTLDGATVARKVLGAVPHDMGLNDPWFEVNAYMLHDPVRWKDLNPKFVLQVYRDVVATGNAGFAEAAWPAVYLAMAYMDQFDRDGDGMVENEGRPDQTYDLWSVSGVSAYTGGLWVAALQAAAAMAGIVGDGAAEAYFRGRYHRARRVYTDELWNGGYFNYRQQRXXXXXXXXXXXXXXXXXSLLW</aaseq>

Gene Sequence

<dnaseqindica>1..30#263..379#717..773#889..959#1468..1568#1682..1785#1887..1940#2029..2084#2182..2220#2308..2436#2505..2723#2860..2930#3031..3103#3303..3364#3494..3891#4456..4983#ATGGGAAGTTCAGAGTTGGAGGAAACCAAGGTACCTTCTGAACCTAACAAAGAGTTGTGGAAAAAGTTTTTTTTTTTTTTTGGAAAATGGAACACGCAAATGATGTGCTCCTGTGTTTAGAAGAACTGTTTTCTTCACCTTGGTTCTTTGGTTCCTTGATTTGTGCCACTATTTATATGGATTGTATCTGAGCAGTGTTTCATTATGTTCTTTGTTGAGAAAGTTAGCCAGTCTCACTCTGAAAGTACTATTCTTGCTTTAGGCAGTCCTGCACATGGATTGTGAAAAGCCACCAGCAATATCTTGGGAGAGGACATTTGATGATGAAGGAAAGAAGGTTGCAATGTTTAGCATGACCTTGAATGACATGATGGCAATTGTAAGCATTTGAGCACACAGTGCACCTCTTGGTTTTCTGCTCTGTAAGATGCCCAAATGAATTGGTTGTTCTTCAAATTTCAATATTCAATACTGTTTGTCAAGGAAAAGTAGTCCTTTCTTTTCAGAGAAGAGCAAGAACACTGTTATTATTCTAAGAAAAGTTGTTAAATTAATAACATGAGCACTAACTTTGTTTAATATTGTTATTTGTTTCTTTTGCATATTTAGCAAAAAGGGCAACGACACTCGTTGCTTTCAAGAAAAGTAGTCTAAATTAGGTATTAGCAGTGAAGCATTCCATTTGCAATGAAGTCATGGTGCTTTTGGTATTGTAGGTGCCGTTGATGATTAAAATGCTGGGACTAAACCTGAAAGACAATGCAAAAGGCCTGGTGATTACTCTTACCCTGTTGAAGATCCAGCTAATCCATCAATAATTGTTTTGCAGGCTGTTGAAATATCAGCAGGAATTGCTAAACTTACTGACAAATTTTCACTTTTGCAAAGGCTTCAGTGTATGATCCACTGAAGAAATGGATGGACAACTGCTACCGCGGTGTACCCCTCGGTGGGATTGGGTAAGCAAATTAAGCCTTTCCTACTAAAAATTCAGCTAAGTTTCCTTACTATCTACGATTAGGAACTATATCAAGATATTCTATTACCTTTTGGTCATAGCTAAATTTGAATTCATTGAACAATAGATGACAACTTTGTTCAAAGCACACTGTTTTATCAGTGCAGGGAGCATAGGGAGAAGCTACAGGGGATATTTTCAGCAGTTTCAGATATTCCCCAGTATATATGAAGAGAAGCCTATCCTAGCAAATCAATTTTCAGTTAGTGCTTTTCATTTTGTATTTCTAATATAAAATGAACATTGATGGTAATCCTAGAAATCCTCTAATCATCACGATCATGGTTCAATTGTATAGGCATTCATTTCGCGCCCTGACGGAAAGAGATACTCGACAGTGTTGTCTGCACCGAATGCCGATGTCCTCAAGTAAACAACAAAATTTATATCAAAGCCTATTTGAATGCATCTTTGCATGCTAGGAATATCATGAAATGTGAAATTTTCAGGGGAATCGATAAAGCTGGCATTGGATCCTGGGACTGGAAGCTGAAAGAGAAGAATTGCACTTACCATGGCTTGTTCCCAAGATCATGGACAGTATACAATGGTACACACTGATTTCTTATAGTAGTATCACTAGACCATTGATCACGAATCCTGGAAAAACATCATTTGTGCAAATCCTTACTAATTTGAGCTCTAAAATTGCAAACAATGCAGGTGAACCTGACCCTGAAATTAAAATAACTTGCCGTCAGATATCACCGTTCATTCCTCACAACTACAAGGAGAGCAGCTTCCCTGTTGCAGTTTTCACTTTTACGGTACAGTTCTTACAATCCTTTTTGTTTCTGCTGCAGATGAAAATAACTCCAATTGATCTGTTCATTTTGTTTTCTCTGAACTTCTGTTCCTGTGCATGCAGTTACACAATTCTGGAAGCACACCTGCAGATGTAACACTGCTCTTCACATGGGCAGTAAGTGCAAACCAACACCTAGTTCTTCATAAAACAAAGACAGCATTTTCCAGTAAAAACCTCACCACTGGCACTGTTCATCATGCAGAATTCGGTTGGAGGGAAATCTGAACTGACCGGGAATCATAAGAACTCCAGAATGACGTAATTACTGATCTTGCCATCATGTCTCTCACCAATTTTAATCAGTTAATTCATGGACTCGTTGCTTCTTGCAACTGTGCTGATCTTTCTTGCGCAGAGCTCGCGACGGCGTCCATGGCGTCCTCCTCCATCACAGGTGCGTAGTTCATCACCTCATCATGCTCTCGTGTCGGAAACTCTTTTGCAAATGAGATGATGACACGTCGTCGATCGATGGATGCAGGACGGCGGATGGGCGCCCTCCGGTGACGTTCGCGATCGCGTCGCGGGAGACCGACGGCGTCCGCGTCACCGGCTGCCCGCGCTTCACGATGGGACCATCCAACTCCGGCGATGTCACGGCGAAGGACATGTGGGATCAGATCAACAACGTACGGAGGACGGACACCATGCATACGTTTCACTGTCAGTCTCTGACAGGCTGACGAACACTGCATGTTCGCGGCGAACAGAATGTTTCGTTCTTCGGGGACGCCAATGCGGCGTCGGCGGCGACGGGAGCGTCGAGGCCCGGGTCGTCCATCGGAGCGCCGGTGGCGGCGACGACGACGGTGGCGGCGGTGGCGCGCGCGCGGTGTCGTTCGCGCTGTCGTGGTCGTGCCCCGAGGTGAAGTTCCCGGCGGGGAGAACCTACCACAGGTGAAGTGACACTGTGACAGTGACACAGCTCATGCTCATCAGCAGCCAGCAATGGCGATTCTCTTGTTGGTTCTTTGCTGTTTCTGAAATTCTCGAACACTGACATGATGAGATCGTCTGATCATGGCTGGAGCAGGAGGTACACCAAGTTCCATGGCACCGATCGCGACGCGGCTGCTGAGCGCCTGGCCCACGATGCTCTTCTTGGTGAAGATAACAAATTTAATTTCTGAATTTACGCAAGAGTCAGGAGTTTGTTGTCTGAAGATTCTGACGACGAATGTTTGGTGTTCTTGTCTGCATGTAGAACACATGAAATGGGAGTCCCAGATCGAGGAGTGGCAGAGGCCTATTCTGCAGGACAAGAGCCTACCTGAATGGTGATCGAATTTTTCAGATTTTGCATATCAATTACTAATCACTACTCCCTCAGTCCAAAAAAAACTCAACCTAGTGTTTCGATGAGACATAATCTAGTACAACGAATCTAGACAAACTTCTAGGTTGAGTATTTTTGGACGGAGCAAGTAATTGACTAATTGGATTAGTGGTCGTTGATGGTAATGTTGTTTTTGTCAGGTATCCAATTACACTGTTCAACGAGCTCTACTACCTCAACGCTGGAGGCACCATTTGGACAGGTCAATATAATCTTCTGCACCCAAATTCTTAAACATCCATTCTGAAAGTCCAAAATAACTTGATCACTGATCTGAAACCCAAAACGATTCAGAAACTTGAAACTGACCAAGAAAACAAAATTGTCACAGATGGGCAGCCTCCGAAGAACACCAGCCTTTCGTCAGCGACTGAGCCGTTCAACCTCGACACGTTCAGTACAGTCGCCAACGGCGGCAGCGCGGTCGACGGCATTTTGAGCACGGTGGCGGCGGCGGCGGCGCGGTCGAACACGGCGGCGGCGGCGGCGGCGGCGATGGGCACGGCGCTGCTGCGCGACGGCGAGGAGAACGTGGGGCAGGTGCTGTACCTGGAGGGGATGGAGTACAACATGTGGAACACCTACGACGTCCACTTCTACGCCTCCTTCGCCCTCCTCTCCCTCTTCCCCGAGCTCGAGCTCAACCTCCAGCGCGACTTCGTCCGCGGCGTCCTCCTCCACGACCCCTGCCTCCGCCGCACCCTTGACGGCGCCACCGTGGCGCGCAAGGTTCATACATCCTCTACCATTCAGTACTCCTTCCGTCCCATTTTAAGTGCAGCTGTAGTTTTCCGTATTCAATGTTTGAGTCTTAGAAAAAATTATGTGAATAATATTTTTATTGTTTTTAGATAATAAAACATAAACACTAATCACATATTTTTTTCAAATAATACAGATGGTGAAATGTTAAACACGAAAAACCACAATTACACTTAAAATGAGACGGAGGGAGAAGTATTAAGTTTCATGCACTGATTAGTAAAAATATAAAAGGTTCATACTTCCTCTACCATTTAGTAGTATTGAGTTTCATACACCGATCAATAAAATATATACTTCATCCGTTTCTAAGACTTTATGTCTTATAATATGAAACGAATGGAGTATATAAAAGTACAGTAATTTTAAGGTTTTATGTATCGACTAATAAGACATGAAGTTATACGTTGGTATTATGCTTCATACGTCGATCAATTAAACGTAAAGAGTATATTGTATATTGAGTTATATGAGTTTATCGGTTAGGCGTGAAGAGCATGCATTGACCAGTTTGGGGTGTCAAAAATGCAGGTGTTGGGAGCGGTGCCACATGACATGGGGCTGAACGACCCGTGGTTCGAGGTGAACGCGTACATGCTGCACGACCCGGTGAGGTGGAAGGACCTCAACCCAAAGTTCGTGCTGCAGGTGTACCGCGACGTGGTGGCGACGGGGAACGCCGGCTTCGCGGAGGCGGCGTGGCCGGCGGTGTACCTGGCCATGGCGTACATGGACCAGTTCGACCGCGACGGCGACGGGATGGTCGAGAACGAGGGCCGCCCCGACCAGACCTACGACCTGTGGTCGGTGTCCGGCGTCAGCGCCTACACCGGCGGCCTCTGGGTGGCGGCGCTCCAGGCCGCCGCGGCCATGGCGGGCATCGTCGGCGACGGCGCCGCCGAGGCCTACTTCCGGGGGAGGTACCACCGCGCCAGGCGCGTGTACACCGACGAGCTCTGGAACGGCGGCTACTTCAACTACAGACAACAGCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATTGCTTTGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027769

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA027769&oldid=34026"