BGIOSGA027774

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Revision as of 07:48, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027774| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027774, complete gene.| tag = P0007D0...")
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Gene Name

BGIOSGA027774

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027774, complete gene.

LocusTag

P0007D08.23

Ensembl Transcript ID

BGIOSGA027774-TA

Ensembl Protein ID

BGIOSGA027774-PA

Length

3050

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:609372..612421

Sequence Coding Region

612107..612421,610316..610555),complement(610085..610228,609866..610000),complement(609372..609737

Genome Context

<gbrowseImage1> name=IndicaChromosome08:609372..612421 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:609372..612421 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAACGCGTTCCGGTGCATGTCGCGCAAGGAGCACCGCGGCGGCGGCGGCGGCGCGGCGGTGTCGCGGAGCAAGCGGATGGGGAGCGCGCGGTCGGGGCGCGGCGGTGGCGGCGGGAAGCTGACGCCCGCGGAGGAGGAGCTCCTGCACCGGCAGGCGCTGGCCATGGCCATCCACCAGCACCTCGACGCCGGCGGCTCCATGTCGCGCCGCATCGACGCCGGCGGCTCCATGTCCCGCCGCATCGGCCCTGGCTCCACCAGTTCACGCCGCCGCGGCGACCTCCCGGACTCCGTCACCGGTGCCAAGCCCGTCCAAATCGTTTTAGAGAACTTAGAAACCAAGAAAATTGTTCTTGTTCATGGAGAAGGGTTTGGTGCTTGGTGTTGGTACAAGACCATTTCTCTCTTGGAGGAAGCTGGTCTTGATCCTATTGCCTTGGATCTCACAGGTTCTGGTATAGACAATGCTGACACAAACAGCATAGCTACATTAGCAGATTACTCCAAGCCCTTAATCGACTACCTCAATAAACTTCCTGAGAATGAGAAGGTTATTTTGGTCGGCCATAGTTGTGGAGGTGCAAGTGTGTCATATGCGTTAGAACAATGCCCCAAAAAGATATCAAAGGCTATATTTCTTACCGCTACAATGGTAAAAGATGGCCAGAGGCCCTTTGACGTGTTCTCTGAGGAACTCGCATCTGCAGATGTTTTCTTGCAAGAATCACAGCTTTTAATTTACGGAAATGGTAAGGACAAGCCTCCTACTGGGCTCATGTTTGACAAACAGCAGATCAAGGGGCTATATTTCAACACCAGTCCTTCCAAGGATACCGTGCTGGCTGCAGTGTCCATGAGGCCCATCCCTCTAGCCCCAATCATGGAGAAGCTCTCCCTCACCCCAGAAAACTATGGCACCGTCCCACGCTACTTCATCCAGACGCTCGATGATCGAATGCTCTCGCCTGATGTCCAGGAGAAGCTGGTCAGGGAGAACCCGCCCGACGGGATCTTCAAGATAAAGGGTGGCGACCATTGCCCCTTCTTCTCGAAGCCGCAATCCCTCAACAAGATCTTGCTTGAGATCGCTCAGATTCAAGCTCCGACGGCGCTGCTCCCAGGCAAGGCGAAGACGGAGGCGATAGAGGCAACAGAGGCTAAGACAGAAGAAGAGAAAACTGAGAAATTATCATGA</cdnaseq>

Protein Sequence

<aaseq>MGNAFRCMSRKEHRGGGGGAAVSRSKRMGSARSGRGGGGGKLTPAEEELLHRQALAMAIHQHLDAGGSMSRRIDAGGSMSRRIGPGSTSSRRRGDLPDSVTGAKPVQIVLENLETKKIVLVHGEGFGAWCWYKTISLLEEAGLDPIALDLTGSGIDNADTNSIATLADYSKPLIDYLNKLPENEKVILVGHSCGGASVSYALEQCPKKISKAIFLTATMVKDGQRPFDVFSEELASADVFLQESQLLIYGNGKDKPPTGLMFDKQQIKGLYFNTSPSKDTVLAAVSMRPIPLAPIMEKLSLTPENYGTVPRYFIQTLDDRMLSPDVQEKLVRENPPDGIFKIKGGDHCPFFSKPQSLNKILLEIAQIQAPTALLPGKAKTEAIEATEAKTEEEKTEKLS</aaseq>

Gene Sequence

<dnaseqindica>1..315#1867..2106#2194..2337#2422..2556#2685..3050#ATGGGGAACGCGTTCCGGTGCATGTCGCGCAAGGAGCACCGCGGCGGCGGCGGCGGCGCGGCGGTGTCGCGGAGCAAGCGGATGGGGAGCGCGCGGTCGGGGCGCGGCGGTGGCGGCGGGAAGCTGACGCCCGCGGAGGAGGAGCTCCTGCACCGGCAGGCGCTGGCCATGGCCATCCACCAGCACCTCGACGCCGGCGGCTCCATGTCGCGCCGCATCGACGCCGGCGGCTCCATGTCCCGCCGCATCGGCCCTGGCTCCACCAGTTCACGCCGCCGCGGCGACCTCCCGGACTCCGTCACCGGTGCCAAGCCCGTAAGATTCTCTCACCTCACCTCATCACCTTCCCCTTTCTGCTGCTTCTGTCTTTACAAGTTCATACCAAATGGTACCGTAGAATTGTGCAGTTGTGCTGTGTATTACTGTATTTTGTGTTGAGTATATTGATGCAAAACTTTTGTGATTCATTAGTATTTGGCCAGTTGAAGGGCATATTGCCTAATTTTGCGGCTGTCAATAGTTCTTGCAGGACCAGTTCATCATTTGGCCCTAATGATTGTCATTTAGTAGCATCTTTCGTCTTGTCGTCATACATTTTGTTGTTTAAGGTGTTTGGTCGGTACTTGGAAGCTTCCTGTTTTTATGATCATCTTGTTAGTGCTATGTTTCGAAGTTCCTTGCATTTTCAGTTGGCATTTCGACGATGCCTTGACTGCAACATTGTCCTCAAATTAGCCGATTTGCTCTGTTCTTTAATGTCTGGCTGCTCTAGTTTAACTAGTTGGGCTTATTTTGTTGTTAGTGTAGGATTGTCTGTGACTGCGGATAATTCAATGAGTTGGGTAGATTTATATTTTTTTCTGATGTTAATTGAACAATGTCTTCCTTTGTACACCGGAAATTTCTGAGATATTTCTTCGTAGTCTCTTTGTTTAGACTTTAGATAGATTTTGATATACAATCAGTAGGCATTTCATATCTATAATTCTATATATAGTTGAATATTCGCTCTTGATGTTATGAAATAAGTTAAAAGCGGTTTTGCGAGGTTCTGAGAGTATGAGATATGTTGAAGCAGGTCTGCAGGTGTAACCATTCATACCCAGTGAGTACAAGTTGGTTTCTAAATAAGATTTGTTGACGGGAATATCAACAGCAAAGCGTATTGCTGTTTCAGTCCATGATTTCTGTTGCTTCATGATTAATTCCATTACCCAACTACCTGTTGATACTTTTGAGCTCTCTCCAATTTTCTGAAATCTTCAACTCTGTGTTGGAAAGGCATCTTTGTGTACAGCTGGTGATTGACACATAAGACAAGGATATGTAGTATCTTGAAGAAACTTGTATGCTATTAGGACTACAAGACAGTGCTAGGACCTCATCAGTGGCCTCATAGTTCACAGCATTTTCCCCATTTTATATTGATCCTCAATTGATAACTCTCTTCTCTGTTTTCTTGTATTCCAGTAGCAGTGATCACTGGTCAGTAGACTTAGCTGTATGTCCTTTCTCAAAACTATGGTCCCAACTATGTCCCTTTGTCCTTAGCCTTGTCTAATCCAAATTAAGAAGAAAAATGTTCTTTGGCTCTTATAGAAAAAAAAAAACTTTTCAATGCTAAAGATGACATAGGCTTTCTCATGGTGCTTCTTGTGGTGATTTAACGTAGTATTTAGGAGCTGATGTACACTAGGAGGAGGGAACCCCAATTGCCCTTAATATACAATTTATTCTGCTTCAATTCTTTGTTTCATGTTTCACATGGGCAATTCTGAAATAATTTTGCATGTTAGTAGCTATATTTCTATTACATGGACTGCATGTTCTCACACATTGTTTTTCCCTTGGGATTGATTTTTTCAGGTCCAAATCGTTTTAGAGAACTTAGAAACCAAGAAAATTGTTCTTGTTCATGGAGAAGGGTTTGGTGCTTGGTGTTGGTACAAGACCATTTCTCTCTTGGAGGAAGCTGGTCTTGATCCTATTGCCTTGGATCTCACAGGTTCTGGTATAGACAATGCTGACACAAACAGCATAGCTACATTAGCAGATTACTCCAAGCCCTTAATCGACTACCTCAATAAACTTCCTGAGAATGAGAAGGTGAGCATTACATCTAGTGTCTTATGTTGAAAACTATGAAAAAAAACTCTGTGTTTGATCTCTGTGTACATGTCAACACTCATGCAGGTTATTTTGGTCGGCCATAGTTGTGGAGGTGCAAGTGTGTCATATGCGTTAGAACAATGCCCCAAAAAGATATCAAAGGCTATATTTCTTACCGCTACAATGGTAAAAGATGGCCAGAGGCCCTTTGACGTGTTCTCTGAGGAAGTATGTACTCTCTTCATGTGCATCATGTGCATTTTTATGCATGTGCACTTCTGCAGGATAGCAACTGACACTATGTTTTTTCAGCTCGCATCTGCAGATGTTTTCTTGCAAGAATCACAGCTTTTAATTTACGGAAATGGTAAGGACAAGCCTCCTACTGGGCTCATGTTTGACAAACAGCAGATCAAGGGGCTATATTTCAACACCAGTCCTTCCAAGGTACATGTTTTCTACTGTTGTGCTGTCTTGCCAACCGAGGAAAAAAAGCTAATTTCGCATTCCTTGACATATTGCCAGTTTATGTTTTCAGTGGGCTAGCTAATAATTTTATGCACATTAAACTGTAGGATACCGTGCTGGCTGCAGTGTCCATGAGGCCCATCCCTCTAGCCCCAATCATGGAGAAGCTCTCCCTCACCCCAGAAAACTATGGCACCGTCCCACGCTACTTCATCCAGACGCTCGATGATCGAATGCTCTCGCCTGATGTCCAGGAGAAGCTGGTCAGGGAGAACCCGCCCGACGGGATCTTCAAGATAAAGGGTGGCGACCATTGCCCCTTCTTCTCGAAGCCGCAATCCCTCAACAAGATCTTGCTTGAGATCGCTCAGATTCAAGCTCCGACGGCGCTGCTCCCAGGCAAGGCGAAGACGGAGGCGATAGAGGCAACAGAGGCTAAGACAGAAGAAGAGAAAACTGAGAAATTATCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027774