BGIOSGA027830

From RiceWiki
Revision as of 07:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027830| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027830, complete gene.| tag = OsI_274...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027830

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027830, complete gene.

LocusTag

OsI_27477

Ensembl Transcript ID

BGIOSGA027830-TA

Ensembl Protein ID

BGIOSGA027830-PA

Length

5994

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:92653..98646

Sequence Coding Region

92653..92733,92801..92998,93267..93365,93537..93625,96060..96165
,96319..96403,96496..96605,97119..97249,97510..97606
,98284..98646

Genome Context

<gbrowseImage1> name=IndicaChromosome08:92653..98646 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:92653..98646 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGAAGACGGTGGTCGGCGACGAGGCGCAGGTCAAGGCATCGGAGGAAACCCTCTCAGCTTCCACCTCTCCAGCTCAGGTGGGGCTCGTCGTCGGCAAGCTCAGCGCCTCTTCCGACCGTGCCCTCGCCTACTCCCTCATCCCCACGCCGCCCACCGATTCCGGCGCTCCCGCTTGCTCCCTCCTCCGCGCCAAGCCCGCCGCCAAAGCTGCCTCTTCCGGCGCGTCCTCGTCGCTCGACTTCGATGTCGACTGGCTCGCCGAGCACGCGCGCCAGGTCTCGAGGATGCTTCTTGGAGGAATGACCGTCATAGGTATTTACATATGGGCGTCAGAAGCTTCATTCAAAGCGACTTCCCCTGCTGTTTTATCACAGGTTCTTAGAGCTGTTTCTCAGGTAGCTCCTTTGTATGGCACTGGTGTTGATGAGAGGCTGCTCATTCATATTTCTTACAGCCCAAGAAGACTGCCAGTTGTTCAAGCTGAGCCTTTTAAGAAGGTTATTTCGAAGGCAATCAGTCATCTCACGAAGCAAGTGCAGAATGCCAAAGCTTTGATTGATGGAGTCCTGTTTTTGGATGGCATGGACAACACTTTGGAGGGGCCACATAATGTTGAATTTCTTGTGCCTTTCAAGAACAATTTGCCTGCCGAAGAATGCAGTTTAGAAGGTGTTGCTGGGCTACTTCTCTTTGCTGGATCTGTCAGCGCCTTGGCATACCTGGGCCCAAAAGAGTCCATTGCAGAAGTTATATCTGATCTAAAGCTGGACATCATCACAAGCCTGAGAAGCAGATTGGACATCATACTAGATGAGGCAGATGATGACTCTACTACTAACAATTTGGAGAATTCACTGTCTCAGAAGGCCACTCAAGTTGTTTTTCATGAGTTGAGAGCACCTTACAGTTTTCCATTCCCTAGAAGAATTCTGATACCTTGGTTGGCTGGCTCCTATATTTGTGACTACTTGCAACAATCAGAAACAATGGAGGATGCCATGGAGCGCTGCAAGGAAGTGATGTCGCTTGAAGCAGATATGGGAAACTATTCGATCGTAGAACCAGAAAGTGCATCGGCTGCGACGCTAGGATCGTTTTGGGATGTGGTCCCCTGGAGCTTTGTCAAAAGCGCCTTCAGAGCCTGGTCTGAAAGAGATGAACTCTGGACAGAATGGCTCGAGGAAGACGCATGGCAGCAGTTTCAGCATTCTAATGGCGTTTGTAGTTCTACTGATTGCCGTGTTGGTTGGATGCATATTCACATTGTCTGCCACCTTGAAGACCTGATCATGTCAAATCGACCGATATGGCATATTTTCTGTTTTGTCCAGAAAGAATTAACTCCTGGAGTATGA</cdnaseq>

Protein Sequence

<aaseq>MVKTVVGDEAQVKASEETLSASTSPAQVGLVVGKLSASSDRALAYSLIPTPPTDSGAPACSLLRAKPAAKAASSGASSSLDFDVDWLAEHARQVSRMLLGGMTVIGIYIWASEASFKATSPAVLSQVLRAVSQVAPLYGTGVDERLLIHISYSPRRLPVVQAEPFKKVISKAISHLTKQVQNAKALIDGVLFLDGMDNTLEGPHNVEFLVPFKNNLPAEECSLEGVAGLLLFAGSVSALAYLGPKESIAEVISDLKLDIITSLRSRLDIILDEADDDSTTNNLENSLSQKATQVVFHELRAPYSFPFPRRILIPWLAGSYICDYLQQSETMEDAMERCKEVMSLEADMGNYSIVEPESASAATLGSFWDVVPWSFVKSAFRAWSERDELWTEWLEEDAWQQFQHSNGVCSSTDCRVGWMHIHIVCHLEDLIMSNRPIWHIFCFVQKELTPGV</aaseq>

Gene Sequence

<dnaseqindica>1..81#149..346#615..713#885..973#3408..3513#3667..3751#3844..3953#4467..4597#4858..4954#5632..5994#ATGGTGAAGACGGTGGTCGGCGACGAGGCGCAGGTCAAGGCATCGGAGGAAACCCTCTCAGCTTCCACCTCTCCAGCTCAGGTTTACCCTACTCTCTCATCGCCGGCAGCCGCAGCCATGGCCAGATTCATCTTGATCTTGATCGCAGGTGGGGCTCGTCGTCGGCAAGCTCAGCGCCTCTTCCGACCGTGCCCTCGCCTACTCCCTCATCCCCACGCCGCCCACCGATTCCGGCGCTCCCGCTTGCTCCCTCCTCCGCGCCAAGCCCGCCGCCAAAGCTGCCTCTTCCGGCGCGTCCTCGTCGCTCGACTTCGATGTCGACTGGCTCGCCGAGCACGCGCGCCAGGTACTAACTAACGTTCCTTCCCAACCTAGCTAAGCTACCTCATCACAATGCCAAATCCTTTTATTGTCTTCCTCCTATATCAGATGCACAAACCCAATATTTTCATATATCAAAATCTGATGTAACAATCACAACCCCCATAATAGTATTGCAAATCGGAACCCCCTTAGTCTCTCTCACTCATGAACTTTACGTGGGTAAGATGCGAGCCCCCTTTTCCCTATTTTGTCTTGGAAACATCTGAATACATACCTTCTATCAATCACAGGTCTCGAGGATGCTTCTTGGAGGAATGACCGTCATAGGTATTTACATATGGGCGTCAGAAGCTTCATTCAAAGCGACTTCCCCTGCTGTTTTATCACAGGTACCAACCTTCTCCTTCCATTGATAATATGGGTTTTGGGAGTCAGGTTTCATCTTTATATCATGCCATTTTCTTTTGTTTTCGCATCCACGCCTTTTTTTTCCCAATGATGCCTCGTAATGTGGCATGGACCTGTAATGTAAAGGATAGTTTGCTTCTCCTATTTTCCAGGTTCTTAGAGCTGTTTCTCAGGTAGCTCCTTTGTATGGCACTGGTGTTGATGAGAGGCTGCTCATTCATATTTCTTACAGCCCAAGAAGGTGCTCCACTATTTATTTTTTGCGGCTATTGCATTCTTACCCCTACTTTGAAGTTCAATTGTGATTTTACCCTCGTTTTTTAGGGTTTGTATTTTTACCCTTGTTTTTTTATTGAAATGAAGAATAGATTTGCCCCTACTTTGGATGGCTGTGTTAACGGTGTTAAGTCGAGTACCAAAAGACATTTATATCCTTGCTTCTATTGCAGATTTTCTCTTACTTCTGAACAAACAATTGTGTTTTTACCCCTTATACATGAAACTTGGAACTAACTGTCGAAACAAGATTTCGGCAATATAAAGGGGTAGCGCACGAGACCTAAAAGTGGATGGATGCGGAGACAAGGATTTAGACAGGTTCAGGCCCTCTCAATGAGAGGTAATACCCTACTCCTGTTTGAGGATTTGAATCCGCCGGATGTAGTATTGATCTGACAATCTGGTTGTGAATCATGTCCCCTAGAGGGCCTCCTGCCCACCTTATATAGGATGGGGGGCAGGATTACAAGATAGAAACCTTAACCAATACGGTATCGGTTTCCTAAATCTACTTTACAATATTATCAAACCAGGATTTTAGGCCGTTCCATAATATACAAGGAAACATAATACCCAAGTCATGATCCGTTACATATTTCATAGATATAAGTTATCCCCTATAACCAGTCAGATAACCGGGTATGGGGTACCCATAATCTCCACACTAACTTGTACACAACGTTTTCTTGACTAATCTCTCGTCATCTCGCGATGCTGCTACATCCTGCTCATGTGCTCCACTCCAAGCCGTATTTGCCGGTCCAAATGCTTCTCTAACTGCAAAACCATGTTGATACATACATCAATATTATAGTTTGTTTGTTCTTAAGATTAATCAAGATGTGCACACAAGAAAGTATGTTTGGAAGAAAAAGAGAACAAATAGCATCTGGAAGACTGAAGAAGTAGGAGGCTTACTCTGCACGCGTCGACGACCGGCCACCGTGGCCTGCTTCTCGCGCCGCCGCGAGTCACCACTGCAAATTGCTGCTAGCGTCGGGGAGATGTCACTGCTGCCTTCTGCTCGTGAAGCCGCCGCCGCGCCCTGCTGCTTGCATCGAGGTGCGCTTACCTGCTTCTCGTGACACCGCGCCGAGGAGCGGCCGCTGGGGCTTGCTGCTCGCGTCGAGGCACGCTGAGAAGCCGCCGCTGCTGCCTGCTGCTTGTGTTGTCGAGCCGGCTCGCCGGAGCCGCCTCCGCCACCTGCTCTTTCTCCCCTAGAGTTTGGGGATTCCTTGGTGTGGGATAACAAATCTGACCAAACATATTTACTCAAGGGTAGATTGGGAATCCCATATTTCCTAAATATTTTTTCCCTTTTCATTTATATTTCTTTAACTTGATATTGTGGGACCACCAAACTACCGTTTAAAGTAGGGGCAAACAGTGACTTCGTTTAGAAAAAAACAGGGGTAAATATGCAAACCCTAAAAAGTAAGGGCAAAATCACAATTGAGATTGAAAGTGGGGGTATAAATACAATTCTCCCTTATTTTTTCCTACATTACTTTGGTTCCTTCTTTAACTGTCCATGTTCTAGAACCATGAGCTAGAAAATCACTTTTTTCTTTAACTAGTACCATTTCTACTTTCTTAGTTCTTATTTTTTCCTTTTGCTTCATGTGGTTCAGCTTGCGTTCTGTCTATAGCCTACCCCAACTTGTTTGGGCCTAAAGCCTGATGATTTTATTGTACTTTGTATTCTTCTCCAAGTAAGTTATATGGGGTCAGTTGTCCGCTTAGCACTTGAATCAAGCTTTATCACTTGGTGAGCCTGGTCGTCACCAAATCAGTTGACATAAATGAAAATTTAGTGTAGTTCAGTGTTATGGTGGTTCTGGTATTACAATTCTCCTTCTTTTGTATGCCAACTGATGATGCTGCTCTTCAAATTCTGCCCTGCTCAACTGCATTTTGAGTTAAGCTATTATATTTTAGGATAAATTCTCAGTACATGCTGACATGCACACCTCATAATACAAAATGAAAATTTTGATGTGTTACAGGTGGGCCTGTCGTATATGTGATATGAGCTCAGGACGTTTAAGGCCATGTGACTTCAAGTATAGTAAACTATTAGCTTCTCTTCAAACTTTCAGATGCACATATAATTTTGAGATAAGGTACTGCTTTTTGAATTCTGACGCATCCTTAGATCCAACAATTCTTGTCTACTTTATGTCACAAAGCTAGAAAAACACCATTCGATGAAGTGTTCTGGACTATCAAACATTAAAGATACATAAAAAATCAACTATGCATATCAGTTTTAATGTGTCACATGCACTTTAGTTAATCCATGCATTTGGCAATAGTACATTTCCCTGTATTGCAATGAGATCCCTTCTGTCACATTCTGACTGATGACATACAATTTGCATTGCATACTGCCATAGACTGCCAGTTGTTCAAGCTGAGCCTTTTAAGAAGGTTATTTCGAAGGCAATCAGTCATCTCACGAAGCAAGTGCAGAATGCCAAAGCTTTGATTGATGGAGTCCTGGTATTTACACAACTTCTTAGCCCTTATTCAGCTGGAGAAGTGAAAAAAAAGATACTATGAGTCAGAATAATTTGCATTGTCTTAGAATTTTGGAGTCCTCTAGTTTTGTTTGTGCTTGACATCCTCTAATAGTTATAATGTATTTTCAACTAGTTTTTGGATGGCATGGACAACACTTTGGAGGGGCCACATAATGTTGAATTTCTTGTGCCTTTCAAGAACAATTTGCCTGCCGAAGGTGCCCTAGCTAATGCTATTTCCTATTATATGTGATGATCAGTTTCTCTTTATGTCATTATGGGAGCCTTATGGTAAATGCTTGCACTAAAGAATGCAGTTTAGAAGGTGTTGCTGGGCTACTTCTCTTTGCTGGATCTGTCAGCGCCTTGGCATACCTGGGCCCAAAAGAGTCCATTGCAGAAGTTATATCTGATCTAAAGGTAGTTATAATATACTAATTTCCATTATTTATCACTGCACCTTGTCACTTTTTCCCATGATGGACTAACCAGAACTTTATAACCACCTTCACATGCTAAGCTTCTATGATTGAATCTGATTGATTATCAAGGAAGTGGCAATGCATTTAGTGGTGAAAATGTGAGCAAGCTCTTCAGTTAGGATTTCAGCACTGGATTGGGAATTTCAAGAATCTGATCCTGGAAAAAAAAATACTGAAACTTGAGTTGTGACTGTAATGTAGCTATATGTCTTGAGTTAAGGAGCTTTATGGCTACTGGAATTTTGATTCTGAGGTATAATTTTTTTAAAGATGGGATTCCCTTATATGGTACTGAATAGTGAATAATGTCCAAAGGGTTCATATCTTGAATCTCCCTTGCATTGGTTGATTTCTAGTCCCAACCATCGTTTTATAGAACTACTCGAACACTTGTCGCTGTTCAGCAAACTAATTAGTGCTTTGTGCTGTCTGTCGACCTGTGCGTATTCAGCTGGACATCATCACAAGCCTGAGAAGCAGATTGGACATCATACTAGATGAGGCAGATGATGACTCTACTACTAACAATTTGGAGAATTCACTGTCTCAGAAGGCCACTCAAGTTGTTTTTCATGAGTTGAGGTACTTCATATTTTCCATGGGACATTTATATTTTGGAGTGAATCAAAGCACACAAACCATGTCTTACATTTTCAAGAAGTCAGGCCTGTTTGGTGTTATGGTCCAATGGAACATATCTTGATGATATTAAATTAAAGCATTAAGATTTCCTGTATTTACAATAGATAGAACAACAAATATGTTGCCACTTAGTCTGTTGTTTTCTTCATGATCTTTGCAATGTTTTATGCAGCTGATTACATCCTTCTTTTTGCATACAGAGCACCTTACAGTTTTCCATTCCCTAGAAGAATTCTGATACCTTGGTTGGCTGGCTCCTATATTTGTGACTACTTGCAACAATCAGAAACAATGGAGGTATTTGTTTTTTCGTGTAGCTAATCTGAATGCACAAGGGGCCTTTTAATTGTCTTAATTGTCAAAGCCTACTAGTAATATTCCAATTCTTCTAGAACACATTATTCTTATATAGTACTCCCTCCGTCTCATAATATAAGGTATTTCTCCTTCAAATTTATCCCAAAACATAAGGGATTTTAGGATTCAGAGTCAATACTTTATTCTCCACTTACCAACTTTTATGCACTCTAGGGTGTGTTTAGTTCACGATAAAATTGGAAGTTTGATTGAAATTGGAACGATGTGATGGAAAAGTTGGAAGTTTATGTGTGTAGGAAAGTTTTGATGTGATGGAAAAGTTAGAAGTTTGAAGAAAAAGTTGGGAACTAAACCAGACCCTACTTTATTCTCCACCATCCACTTTTATACTAGTTTATTCCCCAATCTACCAACTTTTATACTATTTTATTCTTTCACCTCTCACCTTTTGTACTATCACGTCATTTCACTACTTCCTTAATTTTTACCAAAAATTACATAATCCCTTATATTATGGGATGGAGGAAGTAGTCTTCTATATGTTGTTCGCTGGTTGGTTTGTGGTATGTTAGTTTGTCTAACATATCCATGATCGGCTAGAATAAATGATAAGGTTTGGTTTGGCTGCTTGACACCCTTATGTGTGACATGTGCAGGATGCCATGGAGCGCTGCAAGGAAGTGATGTCGCTTGAAGCAGATATGGGAAACTATTCGATCGTAGAACCAGAAAGTGCATCGGCTGCGACGCTAGGATCGTTTTGGGATGTGGTCCCCTGGAGCTTTGTCAAAAGCGCCTTCAGAGCCTGGTCTGAAAGAGATGAACTCTGGACAGAATGGCTCGAGGAAGACGCATGGCAGCAGTTTCAGCATTCTAATGGCGTTTGTAGTTCTACTGATTGCCGTGTTGGTTGGATGCATATTCACATTGTCTGCCACCTTGAAGACCTGATCATGTCAAATCGACCGATATGGCATATTTTCTGTTTTGTCCAGAAAGAATTAACTCCTGGAGTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027830