BGIOSGA027835

From RiceWiki
Revision as of 07:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027835| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027835, complete gene.| tag = OsI_274...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027835

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027835, complete gene.

LocusTag

OsI_27490

Ensembl Transcript ID

BGIOSGA027835-TA

Ensembl Protein ID

BGIOSGA027835-PA

Length

2087

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:187049..189135

Sequence Coding Region

187049..187414,187901..187988,188150..188282,188382..189135

Genome Context

<gbrowseImage1> name=IndicaChromosome08:187049..189135 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:187049..189135 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTTTCCGCAGCATAGTCCGTGATGTTAGGGACAGCTTCGGGAGCTTATCAAGACGGAGTTTCGAGGTGAGAATTTCAGGCCTCCCTGGTCTTTCTGGCCATCACAGAGGGAAGTCCCTTGGATCTTTGAGCGAGCTGCGTGACAGACCTGTAGTAGTAGATCAAAGCAGATGGGTTGGTCTTCCTCCTGAATTACTCCGTGATGTGATGAAAAGACTGGAGGAAGGAGAGAGCAATTGGCCGTCCCGCAAAGATGTTGTTGCCTGTGCAGCAGTCTGCCGAACATGGAGAGAGATATGTAAGGATATAGTGCAAAGCCCAGAAATCTGTGGAAAGCTCACTTTTCCTGTGTCTCTAAAACAGCCTGGGCCTCGAGATGGTTTAATCCAGTGTTTTATCAAAAGGGACAAATCAAAATTAACTTATTATCTCTACCTGTGTCTTAGCCCTGCTGTGCTCAGCGAGAATGGAAAATTCCTTCTTGCAGCTAAGAGGAATCGTCGGGCAACTTCTACGGAATACATAATTTCTGTGGATTCTAAAAACATCTCACGGTCAAGTAATGGTTATGTTGGAAAAATGAGGTCAAATTTTCTTGGCACCAAATTCGTTGTCTACGATACACAGCCCCCGTACAATGCTGGGAGCCTCATGTCATGTCAGCATGGCAGCCGGCGAATCTCTTCTAGGAGGGTTTCCCCAAAGTTACCCACCGGTAGCTACCCAATTGCTCATGTGAAATATGAGTTGAACGTTCTTGGCACTAGGGGGCCGAGGCGTATGCAATGCACCATGCATTCGATCCCAGCCTCAGCAGTTGATCCTGAAGGTGTGGTGCCTGGTCAGCCAGAGCAGCTTCTCCCAGGTCCATTCGAGGAGTCGTTTCGCAGCACAAACACCTCCTCCAGGTTCTCTTTCATGGACAGATCTCTGGACTTCAGCAGCTCCCGCTTCTCGGAAATCAGTGGATCAGCGAACCAACAGGGCGAGGATGATATACCTGAGGCTAAGGAGAGGCCTTTGGTTCTACGAAACAAAGTGCCAAGATGGCATGAGCAGCTGCAATGTTGGTGCCTCAACTTCCGTGGCCGGGTAACTGTGGCTTCTGTCAAGAATTTCCAGCTGATAGCTGCTGCGTCCTCTGAATCTTCACAGTTGGAGCAGCAGCAAAACCATGCTTCGAGTTCTTCTTCGGCATCCGATCATGGCAAGGTGATCCTGCAGTTTGGTAAGGTTGGCAAGGACATGTTCACCATGGACTACCGGTACCCTCTCTCAGCATTCCAGGCTTTCGCCATCTGTTTGACCAGCTTCGACACCAAGCTGGCTTGTGAATAA</cdnaseq>

Protein Sequence

<aaseq>MSFRSIVRDVRDSFGSLSRRSFEVRISGLPGLSGHHRGKSLGSLSELRDRPVVVDQSRWVGLPPELLRDVMKRLEEGESNWPSRKDVVACAAVCRTWREICKDIVQSPEICGKLTFPVSLKQPGPRDGLIQCFIKRDKSKLTYYLYLCLSPAVLSENGKFLLAAKRNRRATSTEYIISVDSKNISRSSNGYVGKMRSNFLGTKFVVYDTQPPYNAGSLMSCQHGSRRISSRRVSPKLPTGSYPIAHVKYELNVLGTRGPRRMQCTMHSIPASAVDPEGVVPGQPEQLLPGPFEESFRSTNTSSRFSFMDRSLDFSSSRFSEISGSANQQGEDDIPEAKERPLVLRNKVPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAASSESSQLEQQQNHASSSSSASDHGKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE</aaseq>

Gene Sequence

<dnaseqindica>1..366#853..940#1102..1234#1334..2087#ATGTCTTTCCGCAGCATAGTCCGTGATGTTAGGGACAGCTTCGGGAGCTTATCAAGACGGAGTTTCGAGGTGAGAATTTCAGGCCTCCCTGGTCTTTCTGGCCATCACAGAGGGAAGTCCCTTGGATCTTTGAGCGAGCTGCGTGACAGACCTGTAGTAGTAGATCAAAGCAGATGGGTTGGTCTTCCTCCTGAATTACTCCGTGATGTGATGAAAAGACTGGAGGAAGGAGAGAGCAATTGGCCGTCCCGCAAAGATGTTGTTGCCTGTGCAGCAGTCTGCCGAACATGGAGAGAGATATGTAAGGATATAGTGCAAAGCCCAGAAATCTGTGGAAAGCTCACTTTTCCTGTGTCTCTAAAACAGGTAAAATCATGCTCAATTATATGTATGGTACCTTTGTGTAAAACTGTAAATGATTACATGAGATCAATCAAGCACCTAGATATATGCTAAGAATGTAAAGTCTTACCAAAGTTCTTGTGAACAACACATGTAGTCTATGGATAGCCAGCCAAAAGGATATTCTGGACTGGGGATGGGTGTGGGGCACATCATCACCCCAACTCCTTTTAAAAGTGTAAAGAATTGTATAGCTTATATTTCTTTTGCCACACTTGTAGTGTAGAACAACCAAAACGAACAAATGGTTGTGTTTCAAATCATAGCAGATGCTATGTTTATCAGGTAACACTGAAATTCTTGTAGGCAATTGAAATTAAAGACTAGATTCTGCAAATAGATGTGTCCTCTTATGAATGTCTGCACCTGTCTTTTATTAGATAATGGAAGCTTTATTGATCTCAGTCAAGTTATGTCTGCACCTGTCTAACTTTGATTTTTCATGTACAGCCTGGGCCTCGAGATGGTTTAATCCAGTGTTTTATCAAAAGGGACAAATCAAAATTAACTTATTATCTCTACCTGTGTCTTAGCCCTGGTAAGTATATGTAACCGCATCTCTTATTAATATTTAAATACCTACCGAACATTTTCTCAGTATACATGAAAGTTGTCACGCATGGTTATTCTTTTTTCCATTAACATTGGTTTATAAACATAGATGGATGCAATGCTAATAATATGATTTCGATCATGTAGCTGTGCTCAGCGAGAATGGAAAATTCCTTCTTGCAGCTAAGAGGAATCGTCGGGCAACTTCTACGGAATACATAATTTCTGTGGATTCTAAAAACATCTCACGGTCAAGTAATGGTTATGTTGGAAAAATGAGGTGATGCACCATCCTTCACTAAGTGTTCCTGCCTAACTTCATTAACTTGAGTTTGGCATAGAAATATGCATTGAAATCTGACACTGCAAACACAAACAGGTCAAATTTTCTTGGCACCAAATTCGTTGTCTACGATACACAGCCCCCGTACAATGCTGGGAGCCTCATGTCATGTCAGCATGGCAGCCGGCGAATCTCTTCTAGGAGGGTTTCCCCAAAGTTACCCACCGGTAGCTACCCAATTGCTCATGTGAAATATGAGTTGAACGTTCTTGGCACTAGGGGGCCGAGGCGTATGCAATGCACCATGCATTCGATCCCAGCCTCAGCAGTTGATCCTGAAGGTGTGGTGCCTGGTCAGCCAGAGCAGCTTCTCCCAGGTCCATTCGAGGAGTCGTTTCGCAGCACAAACACCTCCTCCAGGTTCTCTTTCATGGACAGATCTCTGGACTTCAGCAGCTCCCGCTTCTCGGAAATCAGTGGATCAGCGAACCAACAGGGCGAGGATGATATACCTGAGGCTAAGGAGAGGCCTTTGGTTCTACGAAACAAAGTGCCAAGATGGCATGAGCAGCTGCAATGTTGGTGCCTCAACTTCCGTGGCCGGGTAACTGTGGCTTCTGTCAAGAATTTCCAGCTGATAGCTGCTGCGTCCTCTGAATCTTCACAGTTGGAGCAGCAGCAAAACCATGCTTCGAGTTCTTCTTCGGCATCCGATCATGGCAAGGTGATCCTGCAGTTTGGTAAGGTTGGCAAGGACATGTTCACCATGGACTACCGGTACCCTCTCTCAGCATTCCAGGCTTTCGCCATCTGTTTGACCAGCTTCGACACCAAGCTGGCTTGTGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027835