Os09g0315100

From RiceWiki
Revision as of 07:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0315100| Description = Ribonuclease III domain containing protein| Version = NM_001069379.1 GI:115478497 GeneID:4346696| Length = 3904 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0315100

Description

Ribonuclease III domain containing protein

Version

NM_001069379.1 GI:115478497 GeneID:4346696

Length

3904 bp

Definition

Oryza sativa Japonica Group Os09g0315100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:9213845..9217748

Sequence Coding Region

9213845..9213904,9215451..9215864,9216753..9217013

Expression

GEO Profiles:Os09g0315100

Genome Context

<gbrowseImage1> name=NC_008402:9213845..9217748 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:9213845..9217748 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatatttcttacatgtgtatttctctgcatttttttcatgagttgcagatcctggaagcattaacaacaaagaaatgccaagaagaattttcacaggaatcattagaaacacttggggattctttcctcaaatatgttacaactcggcacctttttagtgaatacaggcttcaacatgaaggcatattaacaaaaatgaagaaaaacttgatctccaatgcagctctgtgccagctggcctgcagcagtaatcttgtgggttacattcatgctgaggagtttaatccaagagattggatcatcccttgcttggactatgatgagcgtggtaacaaaaaaatttcctttctggcacccaatggtatgtacagccaaaggaaaatgtctattaaaagtaagaggattgcggattcagttgaggccttaattggggcttacctcagtactgctggggaaaaggcagcatttcttttgatgaaatcattagggatgaatatagaatttcacactgaaattccagttgaaaggaaaatttcaatgaaagctgaagagttcattgatgtgaggagcttagagggaatgcttggttacaagttcaatgattctttattattgctcgaagcattgacacatggctcatatcagacttctggccctacttcatgctatcagaggctcgagtttcttggagatgctattttggatcatcttttcactgaatattactacagc</cdnaseq>

Protein Sequence

<aaseq>MHISYMCISLHFFHELQILEALTTKKCQEEFSQESLETLGDSFL KYVTTRHLFSEYRLQHEGILTKMKKNLISNAALCQLACSSNLVGYIHAEEFNPRDWII PCLDYDERGNKKISFLAPNGMYSQRKMSIKSKRIADSVEALIGAYLSTAGEKAAFLLM KSLGMNIEFHTEIPVERKISMKAEEFIDVRSLEGMLGYKFNDSLLLLEALTHGSYQTS GPTSCYQRLEFLGDAILDHLFTEYYYS</aaseq>

Gene Sequence

<dnaseqindica>3845..3904#1885..2298#736..996#gttgattttctcatcaatagtttcctatttatgaattattgaagtacctagatcaactagatgtcgtcatataagaaaactcatatttcccttattttttgaagaatttaaaataaaaatggatataagtgcattcttgggcacaccagtaggtgttgtaggaagagtgatgacatttgacagtgaaaactaaaggttctgatttttttagttgtttaatgcagcaacagtgccttagtaagaatatgttcagcacttcgaagtgactatctattaatgaggcaaacataagttttggttccttctacttgcaaacatgacaggtcttaagtcatgtataatgcaagatatttcggggacacttagcaaagaaataattccttttgttgccatgtagaagttggttatttttgtagcaattgatgaggcagtggtacttaataacttcttatgcatataaataccttcaattaatgcgtaatgtaactatataagcacatacaaaaagctgtctgcattattcattaacactccaatggaggtgcttgatggtgtgttgtactctatagaaccatgtatggattgatggtcctatattgtaaaaataagatataagaatatttgaatccgtggagtattttatggttctaattaatattttggatgccccactgttaacaatgtacatgtcaatctgaattttcttacttgttacctgaataaattacttcccctatgcatatttcttacatgtgtatttctctgcatttttttcatgagttgcagatcctggaagcattaacaacaaagaaatgccaagaagaattttcacaggaatcattagaaacacttggggattctttcctcaaatatgttacaactcggcacctttttagtgaatacaggcttcaacatgaaggcatattaacaaaaatgaagaaaaacttgatctccaatgcagctctgtgccagctggcctgcagcagtaatcttgtggtactctagatcctgttgctaactgtatttttcttattgagctaggcatgtagaaattttttttatcgaacacgcaggacagctgcatatcattgcgttaaagaagggtaaaaggaccttagaaacacacacctacacactacagaactgattacatgcacatccttgctaattttatgcaatattaatagtcctacatctcccagtatctttcataccatgtcagcctatttcaattcttttgtgcaactgctatatcacaattaggcaatgttccacatatttcctttttaggaaaatgggaactctattgttgcattgaattgtttgccaagttgccaatatagactattgtaggtgaccaaaaccttgtggtgctgaccctaagttaatacaaggctgtggctcagaccatattactccttgttgggccaacacctagccctcaggtcacatggcacctgtagtcagatctgaggttggcttgacgtggtctgctttcatgaccgttgaagcagcggtactttgcctggcaagcaagaatggcgggaagaatggtagcatctgcctatccttgaaacggattctatcttcggcgtgtgcagtgagatagtaaatagctttctttaatccgctcaaccgacttgtaatcctttcagccaatcaattttaaaggtctaatttttgtttctggtgctatgtggctagggctatgtcatgaaataaaataatgctttgcatacaaatttgttcatcacaaaatgaattgtgttatttttcaagtaccataaaatatttctattcaccttttcatgtttcaaagaagacttatctgtcttttatcactggtactagatgatactcttgccctttatgtttggttggcagggttacattcatgctgaggagtttaatccaagagattggatcatcccttgcttggactatgatgagcgtggtaacaaaaaaatttcctttctggcacccaatggtatgtacagccaaaggaaaatgtctattaaaagtaagaggattgcggattcagttgaggccttaattggggcttacctcagtactgctggggaaaaggcagcatttcttttgatgaaatcattagggatgaatatagaatttcacactgaaattccagttgaaaggaaaatttcaatgaaagctgaagagttcattgatgtgaggagcttagagggaatgcttggttacaagttcaatgattctttattattgctcgaagcattgacacatggctcatatcagacttctggccctacttcatgctatcaggttgatataaaagcatctatcatctctatttagtatgtgtcacggctttattatgccttttgatctttactcaacaaagtgcaaatgattaaacagtattgcaacaacattttttttctatgttagcaatcctctatatgtttcatttccttttgagtttaacttgctgtagaattatctgaaacctgaaaactgaaggactagcctcgctccttcagcgactcgggcggcgcttccagccgccggccctaccccacctccttccttcccaccccttgccgccgctggagctggctgccggaaaccgtgtggcggcgggcctcctttccttgggctctcgcacggacgatggatggcagctagatctaagcgtgacgttggttgctacggcagcggtgggacggctttggatggtagccaaagccggcagcgctaggagaggctgcaacagtggctggcaccggttaggcaggatgcggggcttctgggttggatccgccggaacgctgtggtgattgctcgagtgcagtcggcagagcagctgcatgggcgtttggcggtcgtcctagtcgcaaaagtgggccgcgtgggcggtggttgaggctgtgttcctggctattcaagttggcatcaacggcgaccgcagccctgccgcggtgagcgactggatctggtgcgtcctcgctaggggtagggatccgagccacggggcgtgctagcatccgagcagcgagaggactcctcccaaccgcttggacgttttggagctccttgtggtgcatggatggtggcaacagggtggaggtgcgaggtacgacaacgaccaaagctgggcatctgcgatgatcaagaagcagctgggtagtggtgacggcgtgtcttccatttttgccggccaagcatcttcctcttcttggagctcctccccttctatggctggagactgtagttttggtcatggggagctttgattggagggtggaagttgtggctatcatcaggagatgtcgatggcgtggccggaaacggggtagtcctatgagcatgcctgagctgtcgggctatggcatgggcatggttgctagagggatggtgtggtgatccggcgactgccattgtgctgcggattggttgtgtgggctggatggagaatcaactggtgaaaaccttgttgagccattggctggttgaatgacagcgtcgcctttgggcactgttcccctccttggaggcgccgttatggtgtagttccacctagcccatactgatctccaggtgaaaaccttgcttcagcttacgccgagtggtggtggcgtttacacgtcacatcctccatgggtgcgctgctgctttggagaaccttcctcatactgcggtgaccgttgatggcctcatgcatcggcttgaagctctgaaggcttaggatttttgatgaggcctttgcctttttgtctagcttcttttttatctgaatcaaacttctcaagtagctgttgttagtttgggatcttttttgagttgaatgacaagtttgtgtcccttgcagaggctcgagtttcttggagatgctattttggatcatcttttcactgaatattactacagc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0315100, RefSeq:Os09g0315100