BGIOSGA027848

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Revision as of 07:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027848| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027848, complete gene.| tag = P0450B0...")
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Gene Name

BGIOSGA027848

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027848, complete gene.

LocusTag

P0450B04.21

Ensembl Transcript ID

BGIOSGA027848-TA

Ensembl Protein ID

BGIOSGA027848-PA

Length

2672

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:422265..424936

Sequence Coding Region

422265..422729,423830..423997,424496..424936

Genome Context

<gbrowseImage1> name=IndicaChromosome08:422265..424936 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:422265..424936 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCGGACGCTGGTGCAGCCGGTGGGGCAGAAGCGGCTGACGAACGTGGCGGTGGTGCGGCTCCGTAAGCACGGGCAGCGGTTCGAGATCGCGTGCTTCCCGAACAAGGTGCTGTCATGGCGGACGCGGGTGGAGAAGGACATCGACGAGGTGCTCCAATCCCACACCGTCTACTCCAACGTCTCCAAGGGCGTCCTCGCCAAGTCCAAGGACCTCCTCAAGGCCTTCTCCACCGACGACCACACCGCCATCTGCCTCGAGATCCTCGACAAGGGCGAGCTCCAGGTCTCCGGCAAGGAGCGCGAGGCCCAGCTCTCCTCCCAGTTCCACGAGATCGCCACCATCGTCATGGACAAGACCATCAACCCGGAGACACGCCGCCCCTACACCATCACCATGATCGAGCGCCTCATGCACGACGTCCACTTCGCCGTCGACCCCAACCTCACTTCCAAGGAGCAGGCACTGAAAGTTATTAAGAAGCTAACAGAGCATTTCCCCATAAAGCGTGCACCATTGAGGGTGCGCTTCACTGCACCAAAGTCAAAATTTGCAAGCCTTACAGAGAAGCTTGAAGAGTGGAATGCTAATGTTATTTCAAAGGACGAGTCTGGTAGCCAGCCCTCTGTTGTGTGTGAGATTGAGCCATCTATTCTACGGTCATGTGAGGAGAGATTGAAGGATGTGCAGGGGAGGGTGGAAGTACTCTCAGTGTCAGCGCACGCAGAAGGTGGCTCTTCTGTGGATCAATATGAAAACACTGAAGAATCTCAATCAGTGCCTGCAGTGGAGATTGATCCTGTTGCTCGGATAGGTGAGGCCATGCAGAAACAGTCCATCTCAAGTGAGCCAGAAAATCCTGGGCAGGGACAAGGCAAGCAGCAGAGAAGATGCAAAGAATGTGACGTGCTTGTGGAGGACAAGTTGTATAGGGAGCATTGCAAATCTGGGTGGCACAAGCACAACTACACACGCCACAAGAACGGCCTTCCTCCACTCAGCCAGGAGGAGTGCTTGGTGGAAATGGAATTAGCCGACTCCAAGAGGGACCTAAAAGACTATGATTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MSRTLVQPVGQKRLTNVAVVRLRKHGQRFEIACFPNKVLSWRTRVEKDIDEVLQSHTVYSNVSKGVLAKSKDLLKAFSTDDHTAICLEILDKGELQVSGKEREAQLSSQFHEIATIVMDKTINPETRRPYTITMIERLMHDVHFAVDPNLTSKEQALKVIKKLTEHFPIKRAPLRVRFTAPKSKFASLTEKLEEWNANVISKDESGSQPSVVCEIEPSILRSCEERLKDVQGRVEVLSVSAHAEGGSSVDQYENTEESQSVPAVEIDPVARIGEAMQKQSISSEPENPGQGQGKQQRRCKECDVLVEDKLYREHCKSGWHKHNYTRHKNGLPPLSQEECLVEMELADSKRDLKDYDF</aaseq>

Gene Sequence

<dnaseqindica>1..465#1566..1733#2232..2672#ATGTCGCGGACGCTGGTGCAGCCGGTGGGGCAGAAGCGGCTGACGAACGTGGCGGTGGTGCGGCTCCGTAAGCACGGGCAGCGGTTCGAGATCGCGTGCTTCCCGAACAAGGTGCTGTCATGGCGGACGCGGGTGGAGAAGGACATCGACGAGGTGCTCCAATCCCACACCGTCTACTCCAACGTCTCCAAGGGCGTCCTCGCCAAGTCCAAGGACCTCCTCAAGGCCTTCTCCACCGACGACCACACCGCCATCTGCCTCGAGATCCTCGACAAGGGCGAGCTCCAGGTCTCCGGCAAGGAGCGCGAGGCCCAGCTCTCCTCCCAGTTCCACGAGATCGCCACCATCGTCATGGACAAGACCATCAACCCGGAGACACGCCGCCCCTACACCATCACCATGATCGAGCGCCTCATGCACGACGTCCACTTCGCCGTCGACCCCAACCTCACTTCCAAGGAGCAGGTCTGCTATTCGAATTTTTTTTATTCCAATAGAGGAATACTAATAGGGCTTGCTATTCGATTTGTTAACTACTACCATCTGCTGCTGCCTGCTTTTATACTGACAAAATAGAAACCAGCATCGTTAATAAACATGTTATCGCACCATTGGGCTTCAGATACAACTGATATAGTTAGTGATATTGACATTGTGTTAAATCAATTGAGTTACTTGGTTTCCTGTTTCTCTTTACAATTTAATATATGGAGATCATGGTTTAATTGTTTAAGCACAAATTTCCATGTCCTTATTTGCATTCTAGCGTAATAACTTTGTGTGTGTGGTTTGGTACCTGCGGTCGCATTTATTTAACTTGGATCTTCAATTCTTCTTCAATCACGGTAAGAAATGTGCACACCCAGTTTAGGATTTTCTGGGCCAACCAATTGTATTTTAACATCTAGTTTCTTCAGACACAGAACCAATGATAGTGTAAATAACAGAATATGCACAAAAAGAATGTGTGAATGTAGGTGCACATACCTGCTTGCTTGCATATACAAATTAGACACTCCATAAACCTCGTGTCTTGTGGACTAGTGCTTATTGGCTTAGCGAAGGACACTAATGTGATGAATCGTTCCTGTAAGCTCCCAGTGGACTATTCCTCTGCATTTGCTCCAATTGGTAGGAAATAGTCTGTTAGGCATTTAGCCCCAGAGGCCCAGACTTGATGACATGGCTGAGTCAAACCAAACATCATGGCTGAATAGGAAACTTAGATCACTAGAAATATCTCTGTCTCTCATCATCTGTAGAACTGGTAGCATGACTAAAAAAGGTAATGGTACCTCTAAATGTTTCTTAGTTGTGTATCGCTTGCAACAATTCTGTTCTACCTTCTTTCTACAGTTGATCAACCTTGCAGTGACAGTGAGTCAATTTCTTATAATAACATCATACTTTTTGTGAATAAATCAGTAGGAAACAGGCATGACAATACCGACAACATAATATGTTCATATTTGTTTTGATTACCTATGGTTTCTTCATTGCACAGGCACTGAGAGTTATTAAGAACCTAATTTATTATGATAACCTATGATTTCTTCATTGTGCAGGCACTGAAAGTTATTAAGAAGCTAACAGAGCATTTCCCCATAAAGCGTGCACCATTGAGGGTGCGCTTCACTGCACCAAAGTCAAAATTTGCAAGCCTTACAGAGAAGCTTGAAGAGTGGAATGCTAATGTTATTTCAAAGGACGAGTCTGGTAGCCAGCCCTCTGTTGTAAGTGCTTTCTTCCAGCTATTACTATTTCACTGATTATGATTTGCTTGTCATCAGTGTTCCCTGCATGACTAGAGTCTAGAGGCATTTCGCAAATCATATTGGAGCTCATGTTTTCATCCACAATGTTATGAAGCTGTTAAAAGATTTTTTTTTTTTTTGCTGTCTTTTGGAAGTTGTTACATTCAGATTTATGCTGCTTTATGCCACTTAATATTTTTAGGCTGCAATAAATTTATGCTGCTTTATGCCACTTAAATATTTGTAGAATTTAGTGGAATCCTTCAGAAGCTTGTCCTAGGATAGTAGGCTTTTTTTCATTGATAAATGGATTGTCATATACTGCTATGACTTGGTTGTTAGCCGTGCTAGTCAGAAGCTTGATCCCTATTGCATTGTTCATTCTTCTGTGAAATTATTTCCTATAGGAGCACTACCATCCTGTCATGCTTAACTTTATAACCATTATGTTTGTCCCATGTGTACGATGTTTTTCAGGTGTGTGAGATTGAGCCATCTATTCTACGGTCATGTGAGGAGAGATTGAAGGATGTGCAGGGGAGGGTGGAAGTACTCTCAGTGTCAGCGCACGCAGAAGGTGGCTCTTCTGTGGATCAATATGAAAACACTGAAGAATCTCAATCAGTGCCTGCAGTGGAGATTGATCCTGTTGCTCGGATAGGTGAGGCCATGCAGAAACAGTCCATCTCAAGTGAGCCAGAAAATCCTGGGCAGGGACAAGGCAAGCAGCAGAGAAGATGCAAAGAATGTGACGTGCTTGTGGAGGACAAGTTGTATAGGGAGCATTGCAAATCTGGGTGGCACAAGCACAACTACACACGCCACAAGAACGGCCTTCCTCCACTCAGCCAGGAGGAGTGCTTGGTGGAAATGGAATTAGCCGACTCCAAGAGGGACCTAAAAGACTATGATTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027848