Os11g0148400

From RiceWiki
Revision as of 09:00, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0148400| Description = Conserved hypothetical protein| Version = NM_001072280.1 GI:115484172 GeneID:4349773| Length = 4449 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0148400

Description

Conserved hypothetical protein

Version

NM_001072280.1 GI:115484172 GeneID:4349773

Length

4449 bp

Definition

Oryza sativa Japonica Group Os11g0148400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:2216502..2220950

Sequence Coding Region

2216603..2216767,2216819..2217199,2217881..2218150,2218228..2218356,2218435..2218506
,2218760..2218921,2219407..2219617,2219720..2220055,2220157..2220269

Expression

GEO Profiles:Os11g0148400

Genome Context

<gbrowseImage1> name=NC_008404:2216502..2220950 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:2216502..2220950 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgccgtcgcgttcccgccgccgcccgccccgttcctcgacgacgacctcgatttcggcgacttcgccttcgccgatccccagcccgccgccgccgccgccttcgacgccttcggcgcctacgacgacgactggggtgacttcgtcgacagccgcctcggatcctgggagaagccgcggggcccgctccccctctccctgttcggcgccgacgaggacgaggaggaggaggagggaccggccgagctgccgccgacggctgcggatcagcggggagcgtcgcacgcgtcctccaatggatcgaagccggctgatctcaaggacctcatcgccggcctctatggatctcacccgcaaccctcctccaccgacgccgcggaggtgggtacacaggaggggtcagcggtagcggcggcggaggaggaggaggaggatggtgacggattcgaagatgatggctgggaattcaaggccgcggcgccttcttcttcgtcggatgctgtacaggatggcggcagacaagcccatggggatcttactcaggatgtaccaaagtcaatgagcagcgaccaggagggctggtcattatttactagtgttagcgaaaatttgaacaatgttcaaactacagatcatgttggaactcgtgagtccgctggacaaagtgtgaaggcctttagttattttccacccaataatgcagccatactcgacctgtacaaagaaagtgaaccgattgatgctgtccacattatgcaatgttcttcagaaagtgtgcaaagctcttctgatatgttctctaatactgaaatgaactcttcatttggaacagatgaaaaccattcaattaaatcagcaagtgataggattttgattgatttctaccataagctgagagaagaatcattgacggtaatatcccagtacaagaaggatcttaaggaaagccagaagaattctatgctttctgatgaaaagaatgaagtgatgacagaaactgaaagggagattcaggaaatttgcaaggaattacaagattcttcacttgcgaaaggtttttgcaaagatgaacatccttcaaaggatgtttgcatttctgagctgcttaacagtgccaaagaggatcatttgaaggattttgataaagaataccatttaacagaaataatagcaatggcactggaagacatgagttcagctgttaaactctataagcacagcgtgtcaatccttcgtaccttggaaatagcatccaaagaggagcaatgtgattatgtcagtgcatggtacagtatgcttctgtcctgtgcccaagaattgcagcatggtgcgatgatttggcaggaatcttgtcatgcaaatgttggcgaaacagtaatttctcaaggtgctcattactttattgctcttggggagatctacagagttgcacagatcttacatatatccatgctatctttcaagccttgggttcttgcagatcctggaatgttgagtaaaatgttggtttgttggaacagctgcgttaattcatggactagtggtttaggaatggctcttacaatggttgtcgacagcaagaacttacatgcacctgttgctaaagttcttctcgagtctatcatcaatattaatgacattgaggtgcccaatcttcaaagcttccttcccagtgacaagatggcatgtaaacttaccctcttgcccactagtcttgtacctggaatggaggtcatcatttgggatgccgatcactactttgttaaagttgcaaatctgtgggctaatcagatatcttctgaccctccccagttttcagtctctcgtgttgcttaa</cdnaseq>

Protein Sequence

<aaseq>MDAVAFPPPPAPFLDDDLDFGDFAFADPQPAAAAAFDAFGAYDD DWGDFVDSRLGSWEKPRGPLPLSLFGADEDEEEEEGPAELPPTAADQRGASHASSNGS KPADLKDLIAGLYGSHPQPSSTDAAEVGTQEGSAVAAAEEEEEDGDGFEDDGWEFKAA APSSSSDAVQDGGRQAHGDLTQDVPKSMSSDQEGWSLFTSVSENLNNVQTTDHVGTRE SAGQSVKAFSYFPPNNAAILDLYKESEPIDAVHIMQCSSESVQSSSDMFSNTEMNSSF GTDENHSIKSASDRILIDFYHKLREESLTVISQYKKDLKESQKNSMLSDEKNEVMTET EREIQEICKELQDSSLAKGFCKDEHPSKDVCISELLNSAKEDHLKDFDKEYHLTEIIA MALEDMSSAVKLYKHSVSILRTLEIASKEEQCDYVSAWYSMLLSCAQELQHGAMIWQE SCHANVGETVISQGAHYFIALGEIYRVAQILHISMLSFKPWVLADPGMLSKMLVCWNS CVNSWTSGLGMALTMVVDSKNLHAPVAKVLLESIININDIEVPNLQSFLPSDKMACKL TLLPTSLVPGMEVIIWDADHYFVKVANLWANQISSDPPQFSVSRVA</aaseq>

Gene Sequence

<dnaseqindica>102..266#318..698#1380..1649#1727..1855#1934..2005#2259..2420#2906..3116#3219..3554#3656..3768#tttccgtcctcttctcctccaaccgcccaccatctcatctctcgcacgcacgcacgcacccgccattgctgattgcacctccccccaaccccacctccccgatggacgccgtcgcgttcccgccgccgcccgccccgttcctcgacgacgacctcgatttcggcgacttcgccttcgccgatccccagcccgccgccgccgccgccttcgacgccttcggcgcctacgacgacgactggggtgacttcgtcgacagccgcctcggatccaatccggatggtggctcgtcggcggcggccccggcggagaagccgccctcctgggagaagccgcggggcccgctccccctctccctgttcggcgccgacgaggacgaggaggaggaggagggaccggccgagctgccgccgacggctgcggatcagcggggagcgtcgcacgcgtcctccaatggatcgaagccggctgatctcaaggacctcatcgccggcctctatggatctcacccgcaaccctcctccaccgacgccgcggaggtgggtacacaggaggggtcagcggtagcggcggcggaggaggaggaggaggatggtgacggattcgaagatgatggctgggaattcaaggccgcggcgccttcttcttcgtcggatgctgtacaggatggcggcagacaagcccatggggatcttactcaggtgagcctttcttactgttgatgatgctaaccttgtgaccttaactacctttcagaaatttgatgggatgtatggccgaccaaccatgtagtgacaatcatgaatcatcacggtctgaaaataacatatcggttggtttattgtgatgttgcactcacaacaaacctgatgaatgcaactcgttttcagctcatggggatccatccaatggcaattgtcggtggaaggcaaaataggtggaaactgttaaaatgagacaattcatcaattgcaaataatcccacttcagaaaattttggagctaaccttcgatgaaattgtcgttacgacctgcctcacgaaattaaatcaataaatcatgtgattgtattcttcaagttgaacagtcaagctgcctagaaggatttttattgcctattacaatctgtatacatagtataaaattctgacttacggagtagtaaatttaacagcacacagacattgttataagaattccctagtccctgctaaacaaaggatgaattttatccttatatatcttttgattaaaaaaaaatttctgaaattctagcattagaaatcctgttatgacctctttctagtttttttttctgtattaggtcttgatatgtctatggccttctccactgattggtctgaatctttttattttgtcaggatgtaccaaagtcaatgagcagcgaccaggagggctggtcattatttactagtgttagcgaaaatttgaacaatgttcaaactacagatcatgttggaactcgtgagtccgctggacaaagtgtgaaggcctttagttattttccacccaataatgcagccatactcgacctgtacaaagaaagtgaaccgattgatgctgtccacattatgcaatgttcttcagaaagtgtgcaaagctcttctgatatgttctctaatactgaaatggtgagtattcatggtatttcggctccacattcaccccctttttccccatgtgatacagactaatgatcagtgatcagaactcttcatttggaacagatgaaaaccattcaattaaatcagcaagtgataggattttgattgatttctaccataagctgagagaagaatcattgacggtaatatcccagtacaagaaggatcttaaggtcagtcactactgattatattctgataaatcatttggttatcttccgttcataattttgtaattgatacggattcaggaaagccagaagaattctatgctttctgatgaaaagaatgaagtgatgacagaaactgaaagggagattcaggtgtgctccgcttaatgttttgctataaattattttattcttgtatgtttatcaaagcatgactttttcacaacttgcttgtgtattgttatattgatgtgcatgcaatgcacttttgatcccgacaaatttatttaatgttgtgagacattgagtttgtttctaggatcaactcaagtacttgatattattgttcagtgcaaaacatgaattaaacataatattttgtttaatcattttccataatctccaggaaatttgcaaggaattacaagattcttcacttgcgaaaggtttttgcaaagatgaacatccttcaaaggatgtttgcatttctgagctgcttaacagtgccaaagaggatcatttgaaggattttgataaagaataccatttaacagaaataatagcaatggtaagcatccttatctaggaaatataatttttgtctcattgtctatagactctatacaccttattgtctttaggcatttatatatcctgctttttgacaaaaaagaaaaaatgttttttttattacactgtcaaatcttgtaatttatatcaagttactttagatcagtacacttgttttcttaaattctttggcggatagtcttcagtagtcacatgcacattttcttttgtagatgataaacataattaaatgtgaaaatgatattgtgcttttctataagctgcattgaacttgcctccaaagtgatatatagattgtaccaggcaaagtgattcatagatgacatgtcattttgcttgatttcagtatacgtatgtgcacttaatgtttctgtttgccattaccttctgcccttgtttccatgagtcatgacatgatcttgattgggttattgaaatttcttgatatgatactcaacgtaggcactggaagacatgagttcagctgttaaactctataagcacagcgtgtcaatccttcgtaccttggaaatagcatccaaagaggagcaatgtgattatgtcagtgcatggtacagtatgcttctgtcctgtgcccaagaattgcagcatggtgcgatgatttggcaggaatcttgtcatgcaaatgttggcgaaacagtaatttctcaaggtgggactctgaataatgagcagagctgtataatttgttttttcggtaatcatttgcttgcagaaagatgatcaactaacatgccttctgttggttgcacaggtgctcattactttattgctcttggggagatctacagagttgcacagatcttacatatatccatgctatctttcaagccttgggttcttgcagatcctggaatgttgagtaaaatgttggtttgttggaacagctgcgttaattcatggactagtggtttaggaatggctcttacaatggttgtcgacagcaagaacttacatgcacctgttgctaaagttcttctcgagtctatcatcaatattaatgacattgaggtgcccaatcttcaaagcttccttcccagtgacaagatggcatgtaaacttaccctcttgcccactagtcttgtacctggtaaatacttatcctgcagttacctcttccccgcaaaggacttttcaactatgggatgcttctatcaaccaactaataattattttcttcacctgatgtaggaatggaggtcatcatttgggatgccgatcactactttgttaaagttgcaaatctgtgggctaatcagatatcttctgaccctccccagttttcagtctctcgtgttgcttaaattagcaaggaaatcaacaattgtccatcaagcaacctgtcaatgacgtgggaacgggattgccccttttaagagaaaacttgactacttatgataggaccatcggaagctaaagattctcctgcacaactgcttctggaaggttaacagtattggtcaatgatcattcttttgtgcaagtagcattttgcaccattttttacgtagtgcttggcaacagcactagtatgggaagccaaaatgttcctttagctacacattctgtttagactggactgaagtacagcacattgaagtgtacaaactgcgaaatccaatgggtgcatgcaatgcagtaatagacgtgtatagattgtaagcttaaataatcggtatagaggagggagagatgaggctgtattgagctgattacaagctatataaatcagctgtttgttgtgaccttttcagcaacgtcaggtttgttcagacatcatagcccatttcagcaaatgagatctgcaaatgatgtggaatgtgtatgattctagctgaccccagttgctttgtaataagttagtaaacctggaagtcgccgaccacaacaggttatctgtttttgctgttttaacatagttattttctgtttaagttcttgtgtggaaaacatgcctgaatagcaaggaagattacattgcaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0148400, RefSeq:Os11g0148400