BGIOSGA027855

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Revision as of 07:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027855| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027855, complete gene.| tag = P0007D0...")
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Gene Name

BGIOSGA027855

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027855, complete gene.

LocusTag

P0007D08.9

Ensembl Transcript ID

BGIOSGA027855-TA

Ensembl Protein ID

BGIOSGA027855-PA

Length

3607

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:535079..538685

Sequence Coding Region

535079..535179,535505..535583,536026..536124,536207..536320,536658..536821
,537658..537733,537923..538008,538127..538282,538355..538685

Genome Context

<gbrowseImage1> name=IndicaChromosome08:535079..538685 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:535079..538685 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCGGAAATGGTTAAGGCGGCGACGAGTGAGAAGCTCAAGGAGATGGATTGGGCCAAGAACATCGAAATCTGCGAGCTCGTCGCTCAGGATCCTGGGAAAGCGAAGGATGTGATCAAGCCGATAAAGAAGTATTTAGGTAGCAGGAGCAAGAACACTCAACTTTATGCTGTTATGCTGTTAGAAATGCTCATGAATAACTGCGGAGAACCTATCCACAAGCAGGTCATTGATAACGGTCTTCTCCCGATACTTGTGAAGATTGTGAAGAAAAAGACAGAATTACCAGTTCGTGAAAAAATATTTCTTTTGCTGGATGCGACCCAAACATCCCTTGGTGGAGTTAAAGGGAAATTCCCTCAGTACTATGGGGCATATTATGAGTTGGTGTCTGCTGGCGTTCAGTTTTCGAATCGCCCAAATGTTGTTGTTACACAAGCACAAGCTCCAGTCCCGGTCCCAGAACCAACAATCGAACCAAATAATAACAGTTTATCTAGGAGATTGGACGAAGGACAGAAGGAAGTGCATGCGCAGCCTGTTTCCGAGTCAAGTATAATTCGGAAAGCTTCTAGTGTCATGGAAGTTCTAAAGGACGTGCTTGATTCGATGGATCCTAGACACCCTGAGGGAGCAACTGATGAGTTTGTGTTGGATCTTGTGGAGCAATGCACATTTCAAAAACAGCGAATAATGCATCTAGTTATGACATCAAGGGATGAAGTGGTGGTATCACAAGCAATAGAACTGAACGAAGAGCTTCACAAGGTCCTTGTACGGCATGATGTGTTGCTTTCAGTTCAGCCAACTACAACAGTAGCTTCTACTCTCAAGGAGGAAGAGGAAGAAGATGCCGAAAGCCTTTACCGGAGGCTTCGAAAGGGAAAAGCATTATCGGAAGATTATACAGATGACTCCATACCATCATTTCGATCTATACCTGAAGACAAGATGCGCCGCCCACTCACCATTGAGCCATCCAACACTGATAAGAAACTGGGGGCACTGAATATTCGCTCGCCATATCCTGAAGCGAGGCCTGACGTGCTGATTCCACCACCGCCTGCCAAGCACGCCGAGAGGGAGAGGTTCTTCCGGGAGAAGAGCATGGATGCCAACTTGCTGGGCCATCTTAGGGGCTTATCATTGCACAGCCGGGACGGCAGTAGCTCGTGTAGCGGCAGCACAGATTATGGAGACTGA</cdnaseq>

Protein Sequence

<aaseq>MASEMVKAATSEKLKEMDWAKNIEICELVAQDPGKAKDVIKPIKKYLGSRSKNTQLYAVMLLEMLMNNCGEPIHKQVIDNGLLPILVKIVKKKTELPVREKIFLLLDATQTSLGGVKGKFPQYYGAYYELVSAGVQFSNRPNVVVTQAQAPVPVPEPTIEPNNNSLSRRLDEGQKEVHAQPVSESSIIRKASSVMEVLKDVLDSMDPRHPEGATDEFVLDLVEQCTFQKQRIMHLVMTSRDEVVVSQAIELNEELHKVLVRHDVLLSVQPTTTVASTLKEEEEEDAESLYRRLRKGKALSEDYTDDSIPSFRSIPEDKMRRPLTIEPSNTDKKLGALNIRSPYPEARPDVLIPPPPAKHAERERFFREKSMDANLLGHLRGLSLHSRDGSSSCSGSTDYGD</aaseq>

Gene Sequence

<dnaseqindica>1..101#427..505#948..1046#1129..1242#1580..1743#2580..2655#2845..2930#3049..3204#3277..3607#ATGGCCTCGGAAATGGTTAAGGCGGCGACGAGTGAGAAGCTCAAGGAGATGGATTGGGCCAAGAACATCGAAATCTGCGAGCTCGTCGCTCAGGATCCTGGGTATTCTCGCGATTCCCCTCTTGCATAGTGCCTCTTGACTAGGTTTTCATCTCTAGATTTCTAGTTATCCCGTTTAGCATTGCAAGTTTGCTAGTTGAGGTTTTGGTTATCTAATCCCTGGTATGCAATAGTAGTTTTTTTTCCTTTCCCATTGATATTTTAGTGTAAAGATGGATTTGTACTGAAGGAGCTATCAATCATTCATTGCCAGTTGGCCTCAATATTTCCTTTAGACAAGTTATGGCTCATGGTTTGCCATATGGAAAGGGTGCTTTTATGTCCTTGAATGGCCTATTTATGTTTATCAACCTGTTACTGTCACCAGGAAAGCGAAGGATGTGATCAAGCCGATAAAGAAGTATTTAGGTAGCAGGAGCAAGAACACTCAACTTTATGCTGTTATGGTAAGTTATATTTTGGGGAAGAAGCTTCCTTTATGCTCTGGCTCCCAGATTAGATTAGTTCACAGAGACATTCTCGTTAAAAACTTGTAAGAGATTAGATATGCCCCGTTTATGCACCAACCTACGCTTTCTGTTCCTAATACTCTGTTGCAAATCACCCTCCAATCCTTGCTTTTCTTTAGAAGGGATCATAGAAGTAGTTAAAGATGCTTGCTTGGCTATGGAGTTAATTCTGCGTTTTATGCATCACACCTACATTTTTGATCTCTTAGTCTTAGGTCATATTTGGTATGTTGGTACAAACTATTATCATCCTTGTATCTCACTACAATTAATAACCTGTCTTCCATAGGGAAGCTTATTGAAGTCGTAATTGTGTGGATATCTATATCTTTTTTGTTACCATACCTTTAATCTTGATTTATTGTGCTATTTGTTGTAGCTGTTAGAAATGCTCATGAATAACTGCGGAGAACCTATCCACAAGCAGGTCATTGATAACGGTCTTCTCCCGATACTTGTGAAGATTGTGAAGAAAAAGGTGATTTGTTCTCTTTTCTTTTTCCCTGGAAGTTGGAGGAAGGTTGTTGAGATGTTGACTTAACATACTATCTGTATTTCAGACAGAATTACCAGTTCGTGAAAAAATATTTCTTTTGCTGGATGCGACCCAAACATCCCTTGGTGGAGTTAAAGGGAAATTCCCTCAGTACTATGGGGCATATTATGAGTTGGTGGTATGTATCATATTTTAATATTTTATCTTCATTAAATGCTGTGTTGAAAATTTGGACAGCACTAAGTGAATCTGTATAGTCTATGGTTTTTCTTTAATATATTTTTTGTCACAAAAAATACCTCCATGTGCTCTTCTTAATCAATTGATCATTCCTGAGAATCGTGAGGTCTTGTGTACTGGTATTTATTGATCGCCGCATGATTTATGATTTGACCACCTCCACAACACTGATAGGTTTATCAATTCTTGACATATTGCTATAATGTTATCTTAAAACAGGAAATATCTATCTTTTTGTATACATCTGAAGTGATTTATTGTCTTCTCTTTCGTAGTCTGCTGGCGTTCAGTTTTCGAATCGCCCAAATGTTGTTGTTACACAAGCACAAGCTCCAGTCCCGGTCCCAGAACCAACAATCGAACCAAATAATAACAGTTTATCTAGGAGATTGGACGAAGGACAGAAGGAAGTGCATGCGCAGCCTGTTTCCGAGTCAAGGTATTTTCTGGTTTCTACTTTAATTATGATATCATGTTGTATGTATATGAAGCTTGCACTTTTGTTGTTCCAATCTCACAGTACTTACAATACTTGATCAAAATTTCCATGTTTTAGCAATTGAAATCGATTTTTCCTAGAGTAAGTTCTTTTCTACTGAATAGTGAAACTGATAGTTGCATTAAAATACTTTCATCAAATGTTCCATGGCCAGAGAAAATTGTTCCTAGAACATCCAGCATAATTATTCAACTCTTTACTCACAGCTGATGATGAACTGACAGCTGCGGCCCATGACTTGTTCTAATCGTCTCAATGTCATTTGAGCAACAATGCCACAAGTTTACTGTGTACAAACATTGATGCTTTTGACATAACACTGTGGGTAATCAAATGGTATACTCTGGTTTTAATATGTAAGACTCACATGTTGGTTTCTAGAATTGATGCGGCATTTCAGATTGAAATGTGTGCGTTTATAGCACTTATTAATTGCTATTATTTTTTTCTGTGTGCATCTTTGGTTGCTATGAACTATCCTTGTTGATGTACCATGGTAGGATAGAAGAAATCGATGGTTCTCAAATGGAATATCCAGGATCTAAACACTTCTTTCTGCATGATAGTATTCCACATTTAGTAAATTAGTAGCATGCCTTATCCATAGGGTGTTATGTCTAGCATATATGCATTTTCTGTTGTTTATTAACACTATTAGAGAATATAATAGTTTGATGGTGTCACGATTGTGATGATTATTACCTCTTTGTGTTAACCATTCAACTGCCTTTTGGCTTTTCAATCGTTTTTACAGTGTACTTTGGTTTATATTGCAGTATAATTCGGAAAGCTTCTAGTGTCATGGAAGTTCTAAAGGACGTGCTTGATTCGATGGATCCTAGACACCCTGAGGTATAGATATGGTGGATTGTATCCTCATTTGCGTGATCAATAGTTTCTTTTTCATTTCTTGATTGTTGTTTATAGATTTACCTTTTTGCTTTCGTATGCCTCCTCCGGGGAAAATAACTTAAGAGGCAATTTATTTTTCTCAAGCACCGTGAACTCTTACATGGTTATATCTGCAACTGTATTTTGTAGGGAGCAACTGATGAGTTTGTGTTGGATCTTGTGGAGCAATGCACATTTCAAAAACAGCGAATAATGCATCTAGTTATGACATCAAGGTAAGTGTCCACTGTTTGGTGCTCTTCAATATCTTTTGACATTGCTCCTTCAGTCCGTGATATGTTTATAAGCAGCTATTTTTACATTGACATATGAGTTGCTATCCTTTGTTGCTAGGGATGAAGTGGTGGTATCACAAGCAATAGAACTGAACGAAGAGCTTCACAAGGTCCTTGTACGGCATGATGTGTTGCTTTCAGTTCAGCCAACTACAACAGTAGCTTCTACTCTCAAGGAGGAAGAGGAAGAAGATGCCGAAAGCCTTTACCGGAGGTACGTGTATTCGTTCTTTATTTCTTCAGTGGTGGAAGGTGGCCGATTACTAAATTTTCCTCACCAACACAGGCTTCGAAAGGGAAAAGCATTATCGGAAGATTATACAGATGACTCCATACCATCATTTCGATCTATACCTGAAGACAAGATGCGCCGCCCACTCACCATTGAGCCATCCAACACTGATAAGAAACTGGGGGCACTGAATATTCGCTCGCCATATCCTGAAGCGAGGCCTGACGTGCTGATTCCACCACCGCCTGCCAAGCACGCCGAGAGGGAGAGGTTCTTCCGGGAGAAGAGCATGGATGCCAACTTGCTGGGCCATCTTAGGGGCTTATCATTGCACAGCCGGGACGGCAGTAGCTCGTGTAGCGGCAGCACAGATTATGGAGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027855

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA027855&oldid=34112"