BGIOSGA027873

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Revision as of 07:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027873| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027873, complete gene.| tag = P0498H0...")
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Gene Name

BGIOSGA027873

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027873, complete gene.

LocusTag

P0498H04.26

Ensembl Transcript ID

BGIOSGA027873-TA

Ensembl Protein ID

BGIOSGA027873-PA

Length

7330

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:784069..791398

Sequence Coding Region

784069..784369,790378..790505,790610..790852,790925..791398

Genome Context

<gbrowseImage1> name=IndicaChromosome08:784069..791398 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:784069..791398 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGATGGCTACGCTGCGTCCGGCGCCGGCGTCGATGGTCGTTCTCTGCGCGGTGGTCGTCGTCGGCGCGGTATTCGTCGTGGCGGCGGAGGGCGGCGGCAGCGAGGAGGCGGCGGCGTCGACAGGGAAAGCAGCGATGGTGCCGGCGCTGTTCGTGTTCGGCGACTCGCTGATCGACAACGGGAACAACAACAACCTGGCGTCGTTCGCCAAGGCGAACTACTACCCCTACGGCATCGACTTCGCCGCCGGCCCAACCGGCCGCTTCTGCAACGGCTACACCATCGTCGACGAGCTCGCTGAGCTGCTTGGGCTGCCACTGGTGCCACCATACTCCCAAGCGTCCGGGCATGTGCAGCAGCTTCTTCAGGGCGTCAACTTCGCCTCCGCCGCCGCCGGCATCCTCGACGAAAGCGGCGGGAACTTCGTGGGACGGATTCCGTTCAACCAGCAGATCGACAACTTCGAGGCCACGGTGGAGCAGATCGCCGGCGCCGTCGGCGGCAAGGAGGCGGCGGCGTCCATGGTGGCGCGGTCCATCCTCTTCGTCGGGCTGGGCAGCAACGACTACCTCAACAACTACCTCATGCCCAACTACAACACCCGCCGCCGCTACACCCCGCGCCAGTTCGCCGACCTCCTCGCCGACCGCTACGCCGCCCAGCTCACCAGGCTGTACAAGGCCGGGGCGAGGAAGTTTGTGGTGGCCGGAGTGGGGTCGATGGGGTGCATCCCGAACGTGCTGGCGCAGAGCGTGGAGAGCCGGTGCTCGCCGGAGGTGGACGCGCTGGTGGTGCCGTTCAACGCCAACGTGAGGGCGATGCTGGGCCGCCTCGACGGCGGCGGCCTCCCCGGCGCGAGCCTGGTGTTCCTGGACAACTACGGCGTGTTCAAGGCCATCCTCGGCGACCCGGCGGCGCACGGGTTCGCCGTGGTGGACCGCGGATGCTGCGGCATCGGGAGGAACGCCGGCCAGGTGACGTGCCTCCCGTTCATGCCGCCGTGCGACGGCCGCGACCGCTACGTGTTCTGGGACGCCTTCCACCCGACGGCGGCGGTCAACGTGCTCATCGCCAGGGAGGCTTTCTACGGCGGCGCCGACGTCGTCTCCCCCATCAACGTCCGCCGCCTCGCCGCCCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MLMATLRPAPASMVVLCAVVVVGAVFVVAAEGGGSEEAAASTGKAAMVPALFVFGDSLIDNGNNNNLASFAKANYYPYGIDFAAGPTGRFCNGYTIVDELAELLGLPLVPPYSQASGHVQQLLQGVNFASAAAGILDESGGNFVGRIPFNQQIDNFEATVEQIAGAVGGKEAAASMVARSILFVGLGSNDYLNNYLMPNYNTRRRYTPRQFADLLADRYAAQLTRLYKAGARKFVVAGVGSMGCIPNVLAQSVESRCSPEVDALVVPFNANVRAMLGRLDGGGLPGASLVFLDNYGVFKAILGDPAAHGFAVVDRGCCGIGRNAGQVTCLPFMPPCDGRDRYVFWDAFHPTAAVNVLIAREAFYGGADVVSPINVRRLAAL</aaseq>

Gene Sequence

<dnaseqindica>1..301#6310..6437#6542..6784#6857..7330#ATGCTGATGGCTACGCTGCGTCCGGCGCCGGCGTCGATGGTCGTTCTCTGCGCGGTGGTCGTCGTCGGCGCGGTATTCGTCGTGGCGGCGGAGGGCGGCGGCAGCGAGGAGGCGGCGGCGTCGACAGGGAAAGCAGCGATGGTGCCGGCGCTGTTCGTGTTCGGCGACTCGCTGATCGACAACGGGAACAACAACAACCTGGCGTCGTTCGCCAAGGCGAACTACTACCCCTACGGCATCGACTTCGCCGCCGGCCCAACCGGCCGCTTCTGCAACGGCTACACCATCGTCGACGAGCTCGGTATGTTCATTACCTCACAAACAAACCATTGGCGGATATAGAAAATTGATTCATTGGTGTCATAACGTGTTTATCGATGTCATAGTATACTAATTATGTTTTAGAATATGATGTTATAATATATAGATAAGTAGTTTTGCTATAGGTTTTGCCGAAAGTCGTTGGTGAGGCGACACCAACGACTATACTTTAGATCCGCCCATGTCACAAACTGCATCTGCTAATCACCGTTAACCACTGTCAGACAGTGTATTGCATATCGATTTCTTTTTGGAGTGAATAAAGCTTTGTACCACATTTTATTACTTAAGTATCACTTTAGACCACCCTTAAACAAATCTTTTCACTTTGGACCGGATAAATTTTGCCATTGTTACGATTTGAACCACCACGAATGGTATTTTTTAAGTACAATCAAAGACCTTAAACACATTAGCTCTAATATACAGCCGAACTCCTCTATGTGTGGTTCATATGTTTGCCGAAAGAGAAGTTAGACATGACGAGAAAAGTTGTTCATAGTAGTCTAAACCGCAATAATGGTAAATTTACCCGGTCCAAATTAAAAATATAGGTTTAAGGGTGGTCCAAATAGAAACTTAGGTAATAAAAGGTGGACCAAAGTGCAATTTACTCTTTTTTTTTAAGCTAAGCTGAAAATGGATTTGTGTTTGAACCATGTTGCAATGCAATCTGAAGATTTTTGAACGCCATTCTAGATTTCTAGCAAGAGTTTCAGAGTTCAGGTTGCTTCTCTTTTTTTTTTTTGATCTTTTTGAGCGAACAGAGTTCAGGTTTTAGGCGTGTTTTTTTTCTGCTTGTTGATTAGGCTGCTTACTGACTTGTGATTAATTAGCCCACATGTTTGATTGTGATGAACATTGGTGATGTTGCTGTACATGTTGACCAGCCTATATCTTCTCACCGAGCGTTGAACACAGATCCAACATCCTAGGCAGAGCACAATTTACTACCAACAGAGCCACAGAAATGGAGCACATTACATACTCGCATTTATGAAACGTACCACGATGTAGTAATCTCCTCCTCCTCGCAGACCAGATCTGCAGAAGTAGCAGTAACATTGCAATTGCAACAGTTGGCATTTCCTGTTTGGAGCTTGCAAAATTTCGTGATTCATCTCCAGTACCTCATACTCGACTGCAAGACACTGAATGAACTGGCTAGCTAGCGACCTGCGCACATGCGCACAAGTCAGCAATGGTTCAGTGAATGAACTGAACAAAACAATGATGCATATATGTATATATAGGATTCATTTGGCTGACAATTTCATTTGTACTAAATACTAGTAGTACAAAGGATGAGTTATCAGTTTAGTTTTGTTGATTTACTAGCTCACGTGTTACTAATTACCTTTCTAAGTCAAACATTCTTACATTTAAATTTGGCCAATTTTGTAAATAACTTAGCAACATCCACCATTGAATCCCGTACAATGCGGATAAAATTTGTTGTTTTTGTTTTTCATATGTAGATCAAATTTAACCTTGCATGTTTGTACAGTATATTATATTATCATAGTCTATCTTATCAAATTTTATAAAATTTTTATATAATTGTTTAAACTACGTGTATACACCTAGGTGCCATAGCATCCAGGTATAGAAAATACTTGAATTATCTATAGTATATTTGTTTGAAATATCGATATATTTTTCTATAAACTAGGAAGATAGCCCGCGCATTCGTGCAGGCATGCGTATTAGTTTGTACCGAAAGTAGTTCTAAAAAATAAAAAATTAAAGTAATGTATTCTCTACTGTTAATTGAGTATTTATTATATCTCTTTTTCGTGAAGAAATCTCGACAAACTTTCATTGGTAATAAATATATATTTTTACCATTCTGCTAGCCCTCTCTTTAATTGTTCATATATATGCAATTTGTTATGCAGGTGAATCAATAAAGATAGAAAAATTCTTTAAAAAATATTTATTGTATTCTGAATTTAGTGATTGAGTGATTCTTAATTCGACTCTGTATTCAAATCAAATTACTTTATTCTAAATTGTATTTTTAGGGATTTAAAATTGCGCTTAATCTCATCTCGTGCTGTATTTGATCTCTTCTTTTAATACTTATTTTATTATTCCAAATTTTAGATATTTATAACTTATACTTTTATAGGGACTCTTGATATTTTATATTCTACATGGAATCTTGTTTTTTTATAGTTTTAGTGTTTTTTATTTTTTGTTTGTGTATTTTAATCAAATTGCTTGTTTTATATTTTTGTTCTAAATTTAATTACAAACTCCTTGTGGTGATCCGCCTGTCACCATCAGCATCGCGGATCATTGTTGACCTCCTCATCAGTTAGCCTCTCTTGATACATTGGACATGACGTGGCGGGGCTCGGTGGCAAATATGAAGCTGTTTTCTAGTCCTTGTCGAAGACATGGAACGTCTCGCTCTGCTCCCCTCCTCTTAGTCCTTGTCCTTCATCTAATCATTTAGTGCGCTATTAGGTCCAGGAACTTGTAAAAGTCGATGATGCCGCTGCCATCAGTGTCCACCTCGCTAATAATGTCTTGTAGCTCCGCCTTCATCGGGTTCAGGCCCAGAGTGTGCATTCTGGTTCCAAGCTTCTTTGGTGGTGATTGAACTTGGACTTTAGACCCACAGATTGAATTCATTCATCATTTTCGAAGTGCTATTTTGCTCAAATATTTGTAGTCAGAATAGCAGTATTATCTAACTTATATATAGTAAATATGTGCAATATGGGTCTTGAATTTAATTATAAATAACACAAAAAGTCAAATAAACTGAGAAAAGTACATGTAACTTGAGAGTCATGATCATTTAGCTATTATTATTTTTCTATATATTATGTGCTAGGTAGAAAATAGGAAAAGTTATCTTAAAAATAGGATATGAGAATTGGATCCCAGAGATGAGTAGGACGGTGGAGGTACGTACGTACATGCATGCTCACATACGGTAGGGATGGAGGTGGGGGTACAGGATTTATTTTTGTGAGATGTAGCAGTTATAATTATTGGATCTACATATTTAAAGGAAAATCAATGGTTTGATTTTTTTTATCATAATTTCTAGGAACTTTTAATTTATTTGAGCACTACATGGCATCTCATGAGTGTTTGTAGAAAACCATGTGACAGTTTAAGAGGATCTGTAGGGAGTTTAATGAATTTTTAAGTATATAATAGATAGTTAATATAGCATTTGTTGGTTCTTTATGTACTGAACTGCTCACTAGAAAATATGGATAAGAAAGTGAGCATGAGAGATAATAGGAGATCATTTACGATGGCATGATATATGTTACTTTTTGTAATGTTTTATTACTATTTAGTTGCGATAAAGGGGTTTATGTCAAATGATACATACCAAAATATGGTAAACATAGTTCAAATTAAAATCGAATATATTATAAGATATTCTAATTATTTAGTTGTTGTGTTTTTTGTATACAAAATTTTGCTACGGAAGGATGAAGAGAGGGGTGGGGAGACATACGTACTTTGGATGTACGTACATGTTAGGAGATGAGGGACCTAGGGAGAGGTGTGGACGTACGTGACATTTGTTTTTTTACATATATAGATCTAATGGTGTGTAAAGAGAAAATAAATGGTACGATGTTTTTCTTTTTTTCTTGGAATTTCTTATATTTCTCTAATTTATCATAGCGCCACGTGGCGGCTCAAGAGCGTTTGTAGGAGCCACATGGTGGCTTAAAAGCATTTCTAAGAAGTTTAATGGACTTACTTGTACGATGTCTATTTGTAGGGATTTTTTTTCATAAAGATAAAAAAAGAAGAAAGAAACAAAGAGAAAAAAAAAAGAAGGGGTGATAGGGAGCGTACAATACGCATCCTGCACGGAGGTAGGGACGGCAGGGTTTTTTTTTTCTTTAAAGATAATCTAACGATCTAAAATAATGGACCCACCTGTTTAAGTGAAAATCGATGGTCAGATTTCTCTATTTTATTAGAATGCCACATGGCGACTCGGGAGTATTTTTGGGATGCCACGTGGCGGCTTGAGGGGTTATAACTATTTCCTAATACGCATTCGCGCGGGCATCTATTGTGGTCTGCGTGTTTCAAAAACTTATAAGAACATAATATTAACCGGATAGCACTGTCATACTTCAAAGTATGTTTTCTCCACAAATATTCTTCGTCGGTATTTGTTATTTTCCACAAATGTGTTATCTAACTACTTAAAAGTGTTTCACATTGTTGTAATGTAAGCAACATGTTGTTAATCATATGGTTTAAAAATCTTTGTGGCTTTTCCTAAATATTTATGACTGACCAATAGCTAGCCTCCAAAATATGGTCTAAAGTAATTTATTTCTTTTACTTGTTAAATATACTACATCCGTCCTAAAATGTAAGCATTTTTAGCTATGAATCTGGACACACATGTGTTCAGATTCATAGCTAAAAATAGTTACATTTTGGGACAGAGGTAGTAGTTAATTTGGATTCGACTCATGAAAGTTTACTGCAAATAATCTAATGAGGTGCATAGATAAAAAAATAGTTTAGGTGGTATAGTTGTTTAGAAATTGCTATCACAAAATATGTTTTCTATCTAATTAATAAGCATAAAAATAGGACAATGGGAGAGAAGGAAAATAGGAGGCGAGGTTGTGCTCGTGCATGAGGGGGGAGGGCGTAGACATGCATATGTACGGACATAATGTAATAGGACAGGGGGGTTGGGATTGGGCCTTTTCTCTTTTTGTCTATCTATTAAGATAAATCTAATGGTAAAAAAATAATGATTCCATGGTAAAAGGCATATTTCATATAAATTATGAGTGCATGTGATTTTTTTTTCAATTATTTCATATTTTATTATGTCAATTCGGATGACATGGAAAAAAAAGCAGGGATGCTGTCTCTCGACAAAACACTATTTAATAGTTGAATTTCTAATTTTTGTTTGACATTGTAGTTTTAATTTACATATGCATGTTTCCAGAATAATGTAAGATGAGAGGAAGGAGGAGGAAGGGGAGGAGACGTTTTTTATTTAAAAGTTTTATATAGATAGATTTTATGGTTGAAAATAATAGGTTTATCTATTTAAATGAAAATTATTGATTGAATGTTTCTTTCGCAGCATTTATAGTACTTTTTATAATATATTAGATGTGCCATGTGATGAGCTAGAAACACTATAAAGGATGTATAATGGATAGATCTGCATGATATTTTATGGGGATCTGCTTAACAAATCTTTATTATATAATAAGAATTATATATTAATTATTTATATACTAAGCTGCTAGCGAGAAATAAGGATAATAAAGTGAGCAAGGAGAGAGGGTAGATCATTTACGATTGCATGATATGTATTAATATTTAGTTATTATATAAAGGATATGAGTTTATATCCAAATGATATATTTCTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACACTCCAACACATGGAATAATTAAAATCAAATATATTATAAGAAATTCTAATTATTTAATATTAATATTTTAATATAAAATTTGCTACCTATAAATAAATGGAAAGAAAGAGAGAGAAGGTGGGGAACGTACGTATGGTATGTACGTGATGGAGGGGATACGGATGGGTTTTGTGAATTTTTTTTTCCTTGTTACAAGATAGATATCTAATGGTGTGAAATGGTGGGTCCACCGTATTAAGTGAAAATCGATGGTCGGATTTTTATTTTTTCCTTAGAATTTCTATAATTTGTTAGAGCGCCACATGGCGGTATAGGAGCGTTTGTATAAGCCACATGTCAGTTTAGGAGTGTTTGTAGGAAGTTTAATGGATTTTTAGTATATAATAGATAGATAGATAGATTTTGTCAAGTGGTAAATAGTTTGACTTAAGATAAACTCAAAACATCATAATATAGAACAAAATGGTAATTGACTGAGCTAATTGCAGCTGAGCTGCTTGGGCTGCCACTGGTGCCACCATACTCCCAAGCGTCCGGGCATGTGCAGCAGCTTCTTCAGGGCGTCAACTTCGCCTCCGCCGCCGCCGGCATCCTCGACGAAAGCGGCGGGAACTTCGTAAATCACAACCAATCAATCAATCCTCCTCTCGATCCATGGATTGATCATTCATGCAAGGAAATGATCGATCAAGAACTGATGTTGTTTGATTGCAAATGCAGGTGGGACGGATTCCGTTCAACCAGCAGATCGACAACTTCGAGGCCACGGTGGAGCAGATCGCCGGCGCCGTCGGCGGCAAGGAGGCGGCGGCGTCCATGGTGGCGCGGTCCATCCTCTTCGTCGGGCTGGGCAGCAACGACTACCTCAACAACTACCTCATGCCCAACTACAACACCCGCCGCCGCTACACCCCGCGCCAGTTCGCCGACCTCCTCGCCGACCGCTACGCCGCCCAGCTCACCGTACGTAATTAGCCGCCGCCGCCATTGATCGATCATCTTCGAGCTTATCAATGTGCTCAATAATGGATGCAGAGGCTGTACAAGGCCGGGGCGAGGAAGTTTGTGGTGGCCGGAGTGGGGTCGATGGGGTGCATCCCGAACGTGCTGGCGCAGAGCGTGGAGAGCCGGTGCTCGCCGGAGGTGGACGCGCTGGTGGTGCCGTTCAACGCCAACGTGAGGGCGATGCTGGGCCGCCTCGACGGCGGCGGCCTCCCCGGCGCGAGCCTGGTGTTCCTGGACAACTACGGCGTGTTCAAGGCCATCCTCGGCGACCCGGCGGCGCACGGGTTCGCCGTGGTGGACCGCGGATGCTGCGGCATCGGGAGGAACGCCGGCCAGGTGACGTGCCTCCCGTTCATGCCGCCGTGCGACGGCCGCGACCGCTACGTGTTCTGGGACGCCTTCCACCCGACGGCGGCGGTCAACGTGCTCATCGCCAGGGAGGCTTTCTACGGCGGCGCCGACGTCGTCTCCCCCATCAACGTCCGCCGCCTCGCCGCCCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027873