BGIOSGA027876

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Revision as of 07:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027876| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027876, complete gene.| tag = P0427G1...")
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Gene Name

BGIOSGA027876

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027876, complete gene.

LocusTag

P0427G12.1

Ensembl Transcript ID

BGIOSGA027876-TA

Ensembl Protein ID

BGIOSGA027876-PA

Length

4190

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:813467..817656

Sequence Coding Region

813467..813583,814405..814472,814578..814641,816501..816572,816909..817042
,817128..817257,817338..817448,817531..817656

Genome Context

<gbrowseImage1> name=IndicaChromosome08:813467..817656 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:813467..817656 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCCGGCGGCGGACAGCGCGGCGTCGAAGCGGCAGGCGGAGCTGCTCAAGCAGGAGGGCAACGCCTTCTTCAAGAAGGACCGCATCAGCGCCGCCATCGACGCCTACACCGGGGCCATAGCTCTCTGCCCAAAGGTTGCAGTATATTGGACCAACCGAGCACTTTGCTACAAGAGGCGGAATGAGTGGGTTAGGGTTGAGGAAGATTGTAGAACAGCTATTCAGCTTGACAGCCACTCTGTTAAGGCACATTACATGCTCGGGCTTGCACTTCTCAACAAGGACGAATTGGCCGAGGGAATAAAAGAACTAGAGAAGTCGTTGGAGCTTGGAAGGGGTGCACATCCAGCAAGTTACATGGTTGAAGAGATCTGGCAAGAGCTTTCTAAAGCAAAATACATAGAATGGGAAAATTTATCAAGCGAACGAGTCCGTCAATTGCATAAGCTGAAGGAAGCATGTAAAGAAGCTCTTAGGAATTATAACAGCCTTGACAATCCTCCTGCATATGTCCCCGAGGAACAGCTAAATGAGCTTGAGGAAGTTTTTCGGAAAGCCAGGAAGTCTGATATTCCAACAGAAGTTCCTGATCATCTCTGCTGCAAAATTACTCTTGATATTTTCAGAGACCCGGTGATAACCCCAAGTGGAATCACGTATGAGAGGGCGGTGATTCTTGATCATCTTCATAGGGTGGGGAAGTTTGATCCTGTGACCCGTGAGACACTTGAACCACACCAACTGGTTCCTAACCTTGCCATCAAGGAAGCTGTCCATGCATTTTTGAGTGAACATGGTTGGGCTTACAGGATGAGATGA</cdnaseq>

Protein Sequence

<aaseq>MSPAADSAASKRQAELLKQEGNAFFKKDRISAAIDAYTGAIALCPKVAVYWTNRALCYKRRNEWVRVEEDCRTAIQLDSHSVKAHYMLGLALLNKDELAEGIKELEKSLELGRGAHPASYMVEEIWQELSKAKYIEWENLSSERVRQLHKLKEACKEALRNYNSLDNPPAYVPEEQLNELEEVFRKARKSDIPTEVPDHLCCKITLDIFRDPVITPSGITYERAVILDHLHRVGKFDPVTRETLEPHQLVPNLAIKEAVHAFLSEHGWAYRMR</aaseq>

Gene Sequence

<dnaseqindica>1..117#939..1006#1112..1175#3035..3106#3443..3576#3662..3791#3872..3982#4065..4190#ATGTCGCCGGCGGCGGACAGCGCGGCGTCGAAGCGGCAGGCGGAGCTGCTCAAGCAGGAGGGCAACGCCTTCTTCAAGAAGGACCGCATCAGCGCCGCCATCGACGCCTACACCGGGGTAAGGTTCCCGCCGTGGCATCGCCAGCGTGATTCGTGCCGTCCTAATTCTTCGAACCAACCAACATTTGGACCCTTCAGGCCGCCCCGCTATATCAGCATGTTATACAGTAAATTCCGTGAAAGCTTGTGAATCTCCCTATTGTAATATCATGTCAATTGCATACTGGATTATCCTGGCTGCTTCTCGGGCTCCGGATTAACCCTGCTTCGGCGACGAGTAGCTGGTCTAGATAATTTTCGTTAGTTTGTTGATGTGCCTGGTTCTCTGAAACATGCAAGTCTATGTCATTGCCTGCTGACGTGTGCTTGCTTGCTTGTGGGCAGTTGAGTGATGCTTTTGCACATAGATTCCTGCCTTTCCTTTTAGTTAGTTGAGAATTGCCGCTTTGTGCGGTGCCATCACATCGATGAGACGATGAGCAAGGAAATTTCTCAACGATGAACATCCTTATTTTTAATTTAGCTAATACCGATGCACTGTTAAGGGTTTGCTGGGAGAGGGGAGGGATTGTTTGAGAGTGGATAGACATATTGGTGTTTATGTACCATGCTGTACTAGTCTAGTTCAGAGCGTGAAAATTACTGCCTCTTTGTATTGTTTAAGGTAAAGGCTACAATTTAGTTCTAGATTATCCCTCTTGTTTGGCCTCTTTACATCATGGTGGTGGCGGCGATAAAAACATGTATCAGCTGACTTAGTCGACGACAGATTATATGGAAGCACTCAAGACTTCTTCTTCTTTTTTCTTTTTTTTTTTGTAGAAAGCCTGTACAATTTGCACCTTCCATGCTAATTGCAGTCTCTATTTTGGTTGACAGGCCATAGCTCTCTGCCCAAAGGTTGCAGTATATTGGACCAACCGAGCACTTTGCTACAAGAGGCGGAAGTCTGTATAACTATTATTTCCTCTTCTTTTTTTTGCTGCACATTGGGAGCAATTGATTCACATTTATGTTGCTTACACCATACTTTGCCAATCTGAGTTTTGCAGTGAGTGGGTTAGGGTTGAGGAAGATTGTAGAACAGCTATTCAGCTTGACAGCCACTCTGTTAAGGTTGGTGTATTTACCTATCTTTAACAATTATTGTCTGGACTTGTTTTCTTGCAACTATCTCCTGGTGATGTGTGCTCTACTAAATTAACAAGTGACAACTTTTGCTTTAAGGACATAAATTTTCTTTTAGAGATACTGAATTCCATTTTCTATCTCTGTTACTTCTTGACCAAAGATGTTACAATTTTTTCGTTTATTTCCTGTTTGAGAAACACTAATGACATCAACCTGCTAGTTGATTTAGTCTCAACTTGTTATTGCATTGCCTTTTGGAGGGACCCTTTAATTTTCTGTTCTTTAAACACACCTACCTAACATCCTCTAATCTAGATTTAAAACAAAATTATGTTACCCCCTCTGTTTTGCATTTTTTGTCCATGGCCCACTGCAAGCACACACTAAGGAATCCTTGTTAAGATGCTGCCACAGATGGATTACTTCCTCGCTCATTGAGAAAGATTTCAGAGCCTCCTAGATTGATTGATGCTGGAGTGTATGGACAATAGTTTTGGTCTTGTTGAGGTTTCTGGGGTTTTGGGTATCTATGGTTGGTGTTTTGGTCCTGCACAGACACATGCTTGGCCATGCTCTTGTTTTGGGTTATGTTGTTTTTTCTGAAGTACGCCTTGTGATGTGTCTTGTATGCACTTCATGGTCTGTAAGCGTTACTTCTTGTTCTTGGATTTGATGCCTGGGGAGCTGTGCGGCTGTGCCCTTTGAATCTAAAAAGCAGAAGTTAATGATAGAACACCTTGCATACCCCTACCAAATTCATAATACAACCAATTTACCTCTTTCAAAGTATTTCATTAGGGGCAGAGAGTGAAAAATTTGCAATAACCATGTCTTGATCTCCTCAACGAGCACACACTTTGAAACACATATTACTGGAAATGGGATAGTTTTCATTAGACATTACTGACTAGATTTGCACTTAAACATAGATATGGCAAACTGGACATTAATCATATTAACATGCAGATGTTGCCTGCTGTTTACCCCTTAGTTTGAATATAAAGTGCATACTCTTTTGCTCAATTAGTTTTGAATTTTCCGCAAATATGATTTATCCATGTCTTATGAAGGGCTCACATAGTTTTATGTTATGTTTTATTTGTATGTTACTCCACTTGGGAATAGGGTCCTCCAATTATAGCAAAATGACCTTTAGAGCCATTGATCTTGTTACTTGTTAGCACTTGAACATGAGGTGGATTTATGCTCATGTAACTCATAACTCAATAATTAGCTTATCTTGTTTGGCTCATGTGGCTTGAATCGAGTATTTCACATTTTACAGACCTGATTTAGCAACCAACAGGGTAGAAATCCCTCCTTTTGATACTGGTTATATTTAAAGCTCTTGAACAGTTGGACGAATGGGGGCATCACCTCAAACTATAGAAAAATGTCCTAAGATACATCAGCAGTTCAATTCAAAATATGAATTTTACATATTATAAGGGGACCCTACTGCGATGATTTACTGATATCATGTTCATTAAGATATGCTTCTAGTGCCTAAGAATTGAAAGTATGTTACTATTTCAGGATGCTTTGGTGTCCTTATTAAAGGTAGAAACTAGAAAGTAAGACATTTTATATTGAGTAAAATTTAAAATGCATTTTTGTGGAGTCAGGAGAAAGAACTTGTCTGTTCTTTGTTTCCTTTGATCCATCTTAACCCACTTTTGGTATAGCCAGTTTGAAATGGGCTTGAACTTAAAGCCAAACTTTAGATGCCTCTGCAGGCAACAGATGTATTTTCTCTAGTTGAGCTTAATACCATCTTATCTTGTACTTTACAATGCTAATACCTCTAGTTACCTGACTTTCTTCAACTCATTGATTTTTTGCAGGCACATTACATGCTCGGGCTTGCACTTCTCAACAAGGACGAATTGGCCGAGGGAATAAAAGAACTAGAGAAGGTCTGATTTCACACTCAGTCACAAGTCCACACACATGCACACACTTGAGTAATAATGTTATGATGGTCTGATTTTGCCTTAAGCCTTTTTTTTGCTCCTCCTTCCTCCTACAAATGCTAACACAGCCACGATGTTGATTTGGAGCACAAAATTGAATTATGATTTTAAACTGTCTTAAGAATAGTTGAACTGGCAATGCCAACAGAAACAGGAAAATACAATTTCATACGGGATCTACTTGTTTTTTGTGCTTGTTCTTCTTGATGATGCTATTTTAGTTACAGCTCAAATTCTGCTTACGCCATTTTACTGATGATCCAATCTTTACTAACCCAGTCGTTGGAGCTTGGAAGGGGTGCACATCCAGCAAGTTACATGGTTGAAGAGATCTGGCAAGAGCTTTCTAAAGCAAAATACATAGAATGGGAAAATTTATCAAGCGAACGAGTCCGTCAATTGCATAAGCTGAAGTTTGTGAAAACCTTTTCCATACATTACTCAATCAATATGACAGAGATATAATGCCCTAATTAAATAGTGTTTTCCCTTTTCCAGGGAAGCATGTAAAGAAGCTCTTAGGAATTATAACAGCCTTGACAATCCTCCTGCATATGTCCCCGAGGAACAGCTAAATGAGCTTGAGGAAGTTTTTCGGAAAGCCAGGAAGTCTGATATTCCAACAGAAGTACAACCTGCCTTTGACACTGCTTACTTCCGTGCCCTGACTGGCTTAATCTGAAAAGAAAAGAACTATTTTATATGCAGGTTCCTGATCATCTCTGCTGCAAAATTACTCTTGATATTTTCAGAGACCCGGTGATAACCCCAAGTGGAATCACGTATGAGAGGGCGGTGATTCTTGATCATCTTCATAGGGTAATTGACAGAGGCAATAAAATGTCTTTGAATGTATTTTTGCTTTGCTTACAAAACTTACGATGAGCTTTCAAATTCGTAGGTGGGGAAGTTTGATCCTGTGACCCGTGAGACACTTGAACCACACCAACTGGTTCCTAACCTTGCCATCAAGGAAGCTGTCCATGCATTTTTGAGTGAACATGGTTGGGCTTACAGGATGAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027876