BGIOSGA027894

From RiceWiki
Revision as of 07:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027894| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027894, complete gene.| tag = OJ1005_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027894

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027894, complete gene.

LocusTag

OJ1005_B05.8

Ensembl Transcript ID

BGIOSGA027894-TA

Ensembl Protein ID

BGIOSGA027894-PA

Length

2864

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1162158..1165021

Sequence Coding Region

1162158..1162626,1163504..1163571,1164120..1164251,1164410..1164571,1164734..1165021

Genome Context

<gbrowseImage1> name=IndicaChromosome08:1162158..1165021 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:1162158..1165021 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCCAAGTCGGGGGAAGCGAGCGTTGCGCCGGTGGCCGTGGCGACCGAGGCAACGGCGGCGACGGTGAGCTTCCAGCCGCAGGCGGCGGTGGCCGAGCAGGGTAGCTCGAGCGGTGGTGTGCTGGTGCCGCCGCCGCCTATGGCGGCGGGAGGAGGAGGAGTTGTGGTGGCGGCGGCGCCGGTGGCGGGGGTGGTGAAGGTGGGGAAGAAGAGGGGGAGGCCGAGGAAGTATGGGCCGGACGGGAGCCTGATCCGGCCGCTGAACGCGACGCCGATCTCGGCGTCGGTACCCATGGCGGCCTCCGCGGTGGGGCCCTACACGCCGGCGTCGGCGGTGGGCGCCGCCATGAAGCGCGGGAGGGGTCGCCCCCTCGACTTCGCCTCCACGGCCAAGCTCCATCACCACCACCAACACCAGCACCATCACCAGCAGCAGCAGTTCGGCTTCCACTTCGACTCCATTGGTGAAATGGTGGCTTGTTCTGCTGGTGCGAATTTTACTCCTCACATCATCACTGTTGCTCCTGGAGAGGATGTGACTATGAAGGTCATATCATTTTCTCAACAAGGACCACGAGCTATCTGTATTCTATCTGCTAATGGTGTGATATCAAACGTTACACTGCGTCAACCTGATTCCTCGGGTGGCACATTAACTTACGAGGGACGTTTTGAGTTGCTATCTTTGTCTGGATCGTTTATGCCTACTGAAAACAGCGGAACACGGAGTCGGTCAGGTGGGATGAGCGTTTCTCTTGCCAGCCCAGATGGCCGTGTTGTCGGTGGTGGAGTTGCTGGCCTTCTGGTGGCAGCAAGTCCTGTTCAGATTGTTGTCGGAAGCTTCCTACCAAGCTATCAAATAGAACAGAAGAATAAGAAGCCTAGGGTGGAAGCGGCACCCGCCCTTGCACAGACTCCTCCTGCTGTTCCAATCTCTAGTACCGATACGCACAGCAGCGAGCAAGGGCAGCACAGCTCCGTCGCCCCAAGAACAACAAACATCGTAACCTCAGCATACAACCCAGACCAGAGCTGGGCATCTCCTGCTCAGTCGATACCTGACAGCGCGAGAACACCATCGGGCGATGTGAAGGTCACCGCCTCTGGAGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MEAKSGEASVAPVAVATEATAATVSFQPQAAVAEQGSSSGGVLVPPPPMAAGGGGVVVAAAPVAGVVKVGKKRGRPRKYGPDGSLIRPLNATPISASVPMAASAVGPYTPASAVGAAMKRGRGRPLDFASTAKLHHHHQHQHHHQQQQFGFHFDSIGEMVACSAGANFTPHIITVAPGEDVTMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFELLSLSGSFMPTENSGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQIVVGSFLPSYQIEQKNKKPRVEAAPALAQTPPAVPISSTDTHSSEQGQHSSVAPRTTNIVTSAYNPDQSWASPAQSIPDSARTPSGDVKVTASGA</aaseq>

Gene Sequence

<dnaseqindica>1..469#1347..1414#1963..2094#2253..2414#2577..2864#ATGGAGGCCAAGTCGGGGGAAGCGAGCGTTGCGCCGGTGGCCGTGGCGACCGAGGCAACGGCGGCGACGGTGAGCTTCCAGCCGCAGGCGGCGGTGGCCGAGCAGGGTAGCTCGAGCGGTGGTGTGCTGGTGCCGCCGCCGCCTATGGCGGCGGGAGGAGGAGGAGTTGTGGTGGCGGCGGCGCCGGTGGCGGGGGTGGTGAAGGTGGGGAAGAAGAGGGGGAGGCCGAGGAAGTATGGGCCGGACGGGAGCCTGATCCGGCCGCTGAACGCGACGCCGATCTCGGCGTCGGTACCCATGGCGGCCTCCGCGGTGGGGCCCTACACGCCGGCGTCGGCGGTGGGCGCCGCCATGAAGCGCGGGAGGGGTCGCCCCCTCGACTTCGCCTCCACGGCCAAGCTCCATCACCACCACCAACACCAGCACCATCACCAGCAGCAGCAGTTCGGCTTCCACTTCGACTCCATTGGTTGGTATCCATCTCCTACTCGCATCTCATCTCTCCCCCAAATTTCCTCCCAAAAAAAATCCATAAAACTTGATTTATTTTTTTTTGTCAACCCAATTCTGCTCAAGAGAGAATTTAATTTTGATTTTTTAGCTCTGAGAAATTAATTAGGCGATTAGAGGAGGAGGAGGAGGGGGCCAATGGCAGAAGTAGTAATTGGGGTTGAGGCGTCACTACTTGTCATGACACTGTCTGTCTGTCCCTCTCTTATCCGAATATTTCTTTGTCTCCTCCCGCTCTATCCAGTATCCACCCCAGTGTAGTGTTGCGTTGCATGATCAGATAGATGGTCAGGGACCTCAGGTTGTTGGTGTCCTCCCAAGATTCGAAGAAGCGAGTAGTGGGGGCCAGATGGAGGCATATCCTGAATCCTCAAAGCCTCATCTTGTTGTTATTGTGGTTGCATGCATGGTGGGGCTGTGCCCCGTTGTGGGGGTGGCATGGTGGTGGTGGTTACTAGTTCTGTGGAACTGGATTGGGATCGAGATGGATCAAGCGAAGATCCTGCGAGTCAGGATGTACTTAGGCTCCGGTACCTTTCGATCAATCATCATCCCTGTCTCTGTTGTGCTTCTGCCGTTGCTGATGGCAACACGAAAAGGCCGCGATGTCCTGGCGAATCTGGTCTTTCTGGCAGGTTGTACGAGCTGGAATGGTTGGATTGGAGCATGCTAGCGTTGTCAAGCATCATGAATGCATAAAGTACTGAAATTTCAGTGTCATGGAAATGTCCGCGGGCTGCTGTAGTCGCGTTGCGCTTGTTGCAATCTCTTGAGCATTTTTACCTCGTTTCGAAATTACCTGCCGTCAGTTTGTTAACCATTGTGTGTACTGGCAGGTGAAATGGTGGCTTGTTCTGCTGGTGCGAATTTTACTCCTCACATCATCACTGTTGCTCCTGGAGAGGTATGTAAAAATCAACGTTTTCTTGTGTCTTCACTGGCATCTTACATTGGGTTCAATTGATCAAGATGTATGAGTTCTTGTTGACAATGATTGAATGTGTTCTTTACTTGAATTTGATTGAATAATACTGTACTACAGAGCAAGTAAAATTTTCAGACTGTTTTGTTGAAGGTTTTATGGTTGTGAATCATATGGTTTCAGGCTTTTCTGCAACATAGTGTGATTACTTGCATCATTTTATGTATTTTGAAACATTTTATGCTATATCATGTTTTATACATAAACAGATGAAAGGCGTTTTAGTTTTTACTGCTTTGCTTAGATTAGGTGGGCTGCAAACCTTGATATGAATTTTGGATATGCTCGAATTTTGTTTATCAGACTGGATATGCTTCTCTATGTATTATGTTTTGGCCTTCAAGCCTGTTAAAATGCTTCTATTCTTGCAAATATTTGCATAGTTATAGCTATGCTCCTTATTTTCTAAAATTCTTCTTTTTGAAAGTCTTAATAATATGTGGTACTGATGTTTGTTGCATGTAATTCAGGATGTGACTATGAAGGTCATATCATTTTCTCAACAAGGACCACGAGCTATCTGTATTCTATCTGCTAATGGTGTGATATCAAACGTTACACTGCGTCAACCTGATTCCTCGGGTGGCACATTAACTTACGAGGTTTGTAGACCTACTCTTGACATACACAGCGATGCTTTACATGCCTTTTTGTTTTTGTTTCAGATCTACCATGACATGATTTCGTATATTTGTCTAAAGATGAAAATTTTCTGATTGGCCTTATGGTTCCCAGCTGATCTCCCCTATTTTTATTGTAGGGACGTTTTGAGTTGCTATCTTTGTCTGGATCGTTTATGCCTACTGAAAACAGCGGAACACGGAGTCGGTCAGGTGGGATGAGCGTTTCTCTTGCCAGCCCAGATGGCCGTGTTGTCGGTGGTGGAGTTGCTGGCCTTCTGGTGGCAGCAAGTCCTGTTCAGGTGCTTTTTCTTACCTTCAATTGAGATCTGAATGGATCCCATTTTTGGCAGAAACGCATTCCATGTTTTGTCTGATAAATCGAGCAAACACGGTCCATTTGTTGTACTATTTATCTGTGTTGAGGTGATTGAAATGCCATCTAATATACATTTGGATTCCAGATTGTTGTCGGAAGCTTCCTACCAAGCTATCAAATAGAACAGAAGAATAAGAAGCCTAGGGTGGAAGCGGCACCCGCCCTTGCACAGACTCCTCCTGCTGTTCCAATCTCTAGTACCGATACGCACAGCAGCGAGCAAGGGCAGCACAGCTCCGTCGCCCCAAGAACAACAAACATCGTAACCTCAGCATACAACCCAGACCAGAGCTGGGCATCTCCTGCTCAGTCGATACCTGACAGCGCGAGAACACCATCGGGCGATGTGAAGGTCACCGCCTCTGGAGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027894