BGIOSGA027899

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Revision as of 07:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027899| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027899, complete gene.| tag = OJ1005_...")
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Gene Name

BGIOSGA027899

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027899, complete gene.

LocusTag

OJ1005_B05.22

Ensembl Transcript ID

BGIOSGA027899-TA

Ensembl Protein ID

BGIOSGA027899-PA

Length

3473

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1215460..1218932

Sequence Coding Region

1215460..1215966,1217566..1217669,1217813..1217868,1218017..1218171,1218325..1218438
,1218690..1218932

Genome Context

<gbrowseImage1> name=IndicaChromosome08:1215460..1218932 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:1215460..1218932 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCGCGCCGCCGGCCTCGCCGTCGCCGTCACCGTCGACTGTATTCCGCCGCCATCTCTTCTGGCCCAGTCGTGCGGCCATGGCGCCGCCACCGCCGCCGCCTACCCTCGCGTTCGCGGCGAGCGAGGGCGCCTCCTCCCGAAGCAGGGGCCCACTGATCTCTCTCTACTACTGCTCGGCGCCGCCGCCGCCGTCGTTGCGGCGGCCACACCGCGCACCGCGCACGCGGCGTCCGGGGGCGTCATGGGCGGCCGCGACACCTCCCCATCCCCCTCCTCCTACTCGTCGTCATCGTCGTCGTCGTCGTCGTCATCTCCGTCGGTGAGACACTACCACTACTACCCGCCATCACCGACGAGGTCATCATCGCCGCCGACTCCGGCGGCCCATACCACCAGCTGCCCTATATGTCCGTACGTGCTGTTGGCCGCCGCCGTCGGTATCACTATCATCTTTCTCTGCACCTTGGCCAGCAACCAGAAGACTACCGTCGTCAAGCTCCAGGTAGCGTTGCAGGCTCTGGCAAAGACAATGCAAAAGGATCTCAATACGATTGCTGCCAAGGTGGACACTACTAAAACAGCGTCGCTACAAATTCATGTTAACGGAGACGATATGTTCCTTGAACCGTCAGAAAGATTACTGGTTCTCTTCAGCCTTATCGTCGACGAAATCGATTCTTGGGAGGAGCATTTTGATAAGATTTCTATTGAGGAGAGGAGCAAAACTGATGAAGAAACTCTATTTAACGTGGAGGGAATCAAGATAAGTAAAAAATACTCCAAAAATCCTGAAAGCTGCAGAAAAGAGTACATAGTGTTAACCATTATTCTTGCTGCTGAGGGAAAACTGAAGTTTCCCCAAATCAGAAGCGCCGATGATCTGCGATTAGTACTGGGAATGCTCAACGGTATACATGCAAGTGAAATTAAGGGTGTTCAAATTCTATGGACTCCACAAGAAGAGGATGATGCTCTTTCAGAAGAGAGGCTACTAAAGGACTATCCATATCTGAGGCCCCTAAAACAAGTTTTAATTGGAGAGTCAAAACAACTTTTACTTGGAGAGTCAAAATTCAAACAAATTTTGTTTGGAGAGTCAGAAGAGAAGCAACTTTTGCTTGGAGAGCCAAAAGAACCGTCAGTACAAGAAGATCCTAATAATACTAAGGGATAG</cdnaseq>

Protein Sequence

<aaseq>MPRAAGLAVAVTVDCIPPPSLLAQSCGHGAATAAAYPRVRGERGRLLPKQGPTDLSLLLLGAAAAVVAAATPRTAHAASGGVMGGRDTSPSPSSYSSSSSSSSSSSPSVRHYHYYPPSPTRSSSPPTPAAHTTSCPICPYVLLAAAVGITIIFLCTLASNQKTTVVKLQVALQALAKTMQKDLNTIAAKVDTTKTASLQIHVNGDDMFLEPSERLLVLFSLIVDEIDSWEEHFDKISIEERSKTDEETLFNVEGIKISKKYSKNPESCRKEYIVLTIILAAEGKLKFPQIRSADDLRLVLGMLNGIHASEIKGVQILWTPQEEDDALSEERLLKDYPYLRPLKQVLIGESKQLLLGESKFKQILFGESEEKQLLLGEPKEPSVQEDPNNTKG</aaseq>

Gene Sequence

<dnaseqindica>1..507#2107..2210#2354..2409#2558..2712#2866..2979#3231..3473#ATGCCGCGCGCCGCCGGCCTCGCCGTCGCCGTCACCGTCGACTGTATTCCGCCGCCATCTCTTCTGGCCCAGTCGTGCGGCCATGGCGCCGCCACCGCCGCCGCCTACCCTCGCGTTCGCGGCGAGCGAGGGCGCCTCCTCCCGAAGCAGGGGCCCACTGATCTCTCTCTACTACTGCTCGGCGCCGCCGCCGCCGTCGTTGCGGCGGCCACACCGCGCACCGCGCACGCGGCGTCCGGGGGCGTCATGGGCGGCCGCGACACCTCCCCATCCCCCTCCTCCTACTCGTCGTCATCGTCGTCGTCGTCGTCGTCATCTCCGTCGGTGAGACACTACCACTACTACCCGCCATCACCGACGAGGTCATCATCGCCGCCGACTCCGGCGGCCCATACCACCAGCTGCCCTATATGTCCGTACGTGCTGTTGGCCGCCGCCGTCGGTATCACTATCATCTTTCTCTGCACCTTGGCCAGCAACCAGAAGACTACCGTCGTCAAGCTCCAGGTGAGTTTATCGACCATACAAAAATACCCAACCTAGCTTTAAAGTTTAAATTCAATTGGTTTATAACCTTAATCCCTCAATATTCATATTTAAATTTTGAACTGGTCACCTTTTTTGTAAATTGTTTTATAAGTAAATTTCACAAAACTACAAATACTTTGATCCAGGGGCGGTACCACCCATTAGGCGGGGTTGGGCGGCCGGCCCAGCTACGACCCGTGCCGCCCCAACCCTCCATATTCTTCTTGGGCCGCCTACCACCACATCCAATTCATAATTGGCCCATAAATAAGCAGCCAAAGTGTCTAATTTTAATCCTGCGTATGTGATGCTTTTCTGAGTCAATTTCTCGACACTGCTCACCCCCGTCCCCTTCTATAGTTAGGTGCCTAATGTTTTTCTCTCTCTCCCTTCTAAGCAAAATAATAATCATCTTATTCTGGGTATGCGATATCTTCTCATATATTTATTTTTTAAAAGATATCTATCAACCATTCTTTATGAATTGATTCATATTTACAAATTGATATGTTTACTAGTATCTTTTTGAGAGAATCTATTATATGCCACTGACTTTGTCACGCGTCTACGATTTTAATATCTATCTTTTTATGTATGGCGCAAAATTTATTACTTTATTTTAATATCATTTTTGTTTTTTTGTTTGCCTTAATTTATTGATTATACTATATGTTTATATGATTACAACATAAATATGATATTTTTGCGTTTAGTTGTTCTTATTGAGATGAGCATCTTCGCCCCATTTTTATTTTAATCCTGCATCCGCCACTGCTTTGATCAATCTATCACAAAATTACATATTTAAAAAAGTATATTAGAAAACTACATATTAAACAATATTTTTTCACAAAACTATAGATTTATTAATATATCATATTAATTAGTAAACTACAGATTTAATATCAGTTTTATCATATAACTATAACTTTTATAAACTCAATAGTGTTATATATGGATATAAACTCTAAAGTATACTTGGATAACTTCGTTACTAAATCTGTAATTTTATTATACGATACTTTATTAAATCTAAAGTATACTTTGATATTTTGATTAAATTATATATAATTTTGTGAAATTTACTATTTTATACTCCCTCTATTCAAAAGTCTAATATCTATTCCATTCTATGGCTTTTCCAAAAGTCTTAAGTTCTATTTGTTATCACTATGTGTTAAATTAAATGGTTGATCGAAACCTAAAAAGCTATTTTTGTATTTATTGGTTGCATGTTCATTAATTTTGTCACATGGTGGATGAGTATTATATTCCTTGGTCTTGGTGCCAAAAGAAATAGGTATTAGACTTTTTGAATGGAGGGAGTAAATACTTAAAAATGATGTCATGATATTATGTTGCATCGTAAGCACAAGCTAGCGTAAAGTTCCGTTTATCGTAGTCTAACCAATTGAAAAATTATTAATGTTCAAAGTTGAATAATGCCGGTCAACTGTGAAGAACGTAGAGCGTATTAATTTAGACCATTTTGATCAGTGATCTAATTGCATTTAATTTGTCCCAATTATTGTGTATCACTAATATCATTGGGGGTTTGTAAATTGTCACAATATTCAGGTAGCGTTGCAGGCTCTGGCAAAGACAATGCAAAAGGATCTCAATACGATTGCTGCCAAGGTGGACACTACTAAAACAGCGTCGCTACAAATTCATGTTAACGGGTAATATAATGCGATTTGTTGATTTCTCTAAACCCTAAATTCATTCTTGCAGTCGGCTGTTATACATTATTGATTCTACACTGCACAATTTGATACTTAGAGTAGAAGAGAAATTTATATATGTTCATGCCCCATTTGTGCAGAGACGATATGTTCCTTGAACCGTCAGAAAGATTACTGGTTCTCTTCAGCCTTATCGGTAAGAAAAATATACAATTTTCAGAACCTTTAATTTCGAGACAAACGCAACGTTTTTGTGTTCCACTAATTTATGACCCTGTGAATTAACTCACCGTGTTTTGTTATTTGGGTGTACATTTAATTTTAGGCTGATGTGAAAAAAACAGTCGACGAAATCGATTCTTGGGAGGAGCATTTTGATAAGATTTCTATTGAGGAGAGGAGCAAAACTGATGAAGAAACTCTATTTAACGTGGAGGGAATCAAGATAAGTAAAAAATACTCCAAAAATCCTGAAAGCTGCAGAAAAGAGTACATAGTGGTATGCAAAATTTTCCTAAGCTTGCATATATGCTTACAGGATTTTTTTTTTCTCGTCAGTGGTTGCCTTGGAACTCTATATCTAATTAATGATCGATTGAGGCATGCTTTTTTACTAAGATATTTGTTTGGGGATTATTGTCAAATCATGCAGTTAACCATTATTCTTGCTGCTGAGGGAAAACTGAAGTTTCCCCAAATCAGAAGCGCCGATGATCTGCGATTAGTACTGGGAATGCTCAACGGTATACATGCAAGTGAAATTAAGGTATATTAGCATGCATGTTATTCATTTCATTTACACGTCCTCTTATCTTATATATATGCACCAATTTTTTAAATAAATGAAAATGGTTTACATATCTGATTTCTGACAATCGGCACACAAACACACAACCAATATTTAAAATTAAGGATACTGCATCTCCTGCAATGCAACCTCATTAATTCTTGTGAGTAATCATTCACTCTCAAATTAATCATATCCTAATCCTAACTATATTGGACCTATTGTTTCAGGGTGTTCAAATTCTATGGACTCCACAAGAAGAGGATGATGCTCTTTCAGAAGAGAGGCTACTAAAGGACTATCCATATCTGAGGCCCCTAAAACAAGTTTTAATTGGAGAGTCAAAACAACTTTTACTTGGAGAGTCAAAATTCAAACAAATTTTGTTTGGAGAGTCAGAAGAGAAGCAACTTTTGCTTGGAGAGCCAAAAGAACCGTCAGTACAAGAAGATCCTAATAATACTAAGGGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027899