BGIOSGA027902

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Revision as of 07:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027902| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027902, complete gene.| tag = B1203H1...")
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Gene Name

BGIOSGA027902

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027902, complete gene.

LocusTag

B1203H11.6

Ensembl Transcript ID

BGIOSGA027902-TA

Ensembl Protein ID

BGIOSGA027902-PA

Length

3571

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1261894..1265464

Sequence Coding Region

1261894..1261905,1262111..1263286,1263402..1263618,1263861..1264046,1264202..1264411
,1264830..1265464

Genome Context

<gbrowseImage1> name=IndicaChromosome08:1261894..1265464 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:1261894..1265464 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAATGCTGCATAGTTCATTGGGGCCTTGCAAGATGATTGAGGGGAGGAGGCACTCCGTTGACATCCCGATTTCGAGGGCTCTACTGGCCGTCATGAGGTCCAGATCTCTGAGGGACCCTGAGACCAACTCGCTGGCCAAGTTCTCGGCGAAGAAGACCATCTGGGAGGGTTGTTCTCTCGAGGAAGATGACCTGGAGGGGAGCAATTATGGTAGGCACAGCTTTAGTTACAACATGTATGATCATCTCCAGAGGAGGAGGGAGGAGTTTGGGGACAGCGCGAGGTCTGGTCGGCTGGTGAACTCGCCGATCAACATCATCAAGGCCAATGCGAGGGTCAAGGCGGCGCTTCATAACCAGACCTGCTCCTCGGTGATCTCGGGGATGTCAAGGGCAACAAAGGACAGGGCATCCTCTTTGATGATTGAAGGAGAGCAATTGGGTCGGAGGGAGGGAGCTACATTTCAAGAAAGCGCGAGAAGTTTGCTTCAAAAGTACCGGCCCAAGGCTTTCTCTGAGCTGGCTGGACAAAATGTTGTTGCTCAGTCTCTTTCAAGTGCTGTTTTGAAAGGAAAACTTGCTCCAATCTATCTCTTCCATGGTCCACATGGCATAGGAAAGACATCTGCAGCTAGAATATTTGCCGCATCACTGAATTGCCACTCTTCAGGTGGGAACCAGCCTTGTGGGCACTGTGAGGAATGCATGGCCATATTCTCAGGAAACAGTAGCAGTGTGATAGAGATTGATGCTTCTAAACTGGATTGCAAATCTAGAGTTGCTGCCTTGCTGAGGAATGCCTGTGAAGTTCCTGCTTCTTCGCACTTCAAGGTTCTTATTGTGGATGATTGCCAACACATGGATAAGGAGGGATGGTACTCTGTCTACAGTAGCCTTGAAGGCATCCCTGACAGCTCAATCTTTGTGATGATCACATCTGACATTGATAAACTGCCAAGTAATTCAGTTGGATGGTGCCAGAGCTACAGGTTTTGCAAGGTAGACGAAGCAGAGATCGCCCTCCGATTGAGTAGGATTTGCATAAATGAAGGTATGGAGTTCGAGGCCGAAGCACTGGAGCTTATTGCTCGCAAGGCCAACGGTTCCATTCGAGATGCAGTTCAAATGCTTGACCAGCTTACTCTGCTAGGAAAAAGGATCAGCAAATCAGTAACATATGACCTAATAGGCGATGTCTCAGATGAGGAGTTGCTTGATCTTCTTAATCTGGCTTTTTCATCGGATGCTGCTACCATTGTCAGGAGGGCTAGGGAGCTTTTGAGCTCAAAGGTTGACCCCCTGCAGTTATTAGCTCAGCTTGCAAATCTTATCATGGATATTTTAGCTGGGAGGCACCAGTCAGATTCCCAAGAAGTTAGAAAGGTTACTGGTAAACATACATCGGCTGAAATTGATGTGCACAAACTTAGAAATGCACTGGAAATACTTTCTGAAACTGAAAAGCAGCTGAAAACCACAAAGAACCAGTCTACATGGCTTACAGCAGCGCTGTTACAGTTTAATATGAGAGAGCCGTACTGCCTAGATGATGCTGCAGTTTCAAGCATGTTCACAGAGAGTCAGACAGATGATGGGGCTGCTATCTTGAAAGACGAAAGCTTAGATACCAGTTCTCATCTTTGCTATCAGAACAAAATCGGTTGTTTAGATATGAACTTAGGAGATCCAGATGTGCTCGAGACCATATGGATTAAGGCTCTTGAGAACTGCACGTCTAAACCACTTCATAGTCTGTTGAGAAAAGATGGGAAGTTGTCATCCCTGTACACCACTCAAGGTGTAGCAGTTGCTGAGCTGCAGTTCTGCCACCCCGAGGATGTACCTACAACAGAGAGCTTTTGGAATCCATTTGTGGTTTCTCTGCAGAATTTGCTAAAGTGCAATGTGGATATCAGGATCAATCTTTCCCCAATCTCCACCAGCAACAGAGTTGTATCCAAGAATTCATCAGTAAGCCTGGTCATGCAATCCAGAGAAGATCAGGAGACAGAAGATCCAGTTGCCGCAGGTTGCAGAACAGTAGCTTCATCAAGAAAAGAGTGCCCTTCTCCACTCGCGGTGCAACCAAAGGAGAAGCCGTCGCACATTCTGGGGTGCCTCCATGCTACAGATGGCGACGCGGTGGATACCGAGTCGAGGATCTTGAGCTATCAGAAGATTTCAGTCATACCTGAAGCATCCACTCCAGGAAATGGTTCCTTCAAAGCTGGAGGGCACACACCAAAGGTTGACGAAGCCAGAGCTCGCCGAGGCTGTTTCTCGAAGCTTCTACAGCGCCGTGCTGGTGCTCCTTATCAAAATGGAGCTTTGCCTCGCAGGGGACTGTTCAAATGCTGTTTCTGCAAGATCAGACCAGACTGCAAGACGAAAGTGGAAGAAACTGATGGGTTCCAAGGGCACAGTAAAAACTGA</cdnaseq>

Protein Sequence

<aaseq>MAMLHSSLGPCKMIEGRRHSVDIPISRALLAVMRSRSLRDPETNSLAKFSAKKTIWEGCSLEEDDLEGSNYGRHSFSYNMYDHLQRRREEFGDSARSGRLVNSPINIIKANARVKAALHNQTCSSVISGMSRATKDRASSLMIEGEQLGRREGATFQESARSLLQKYRPKAFSELAGQNVVAQSLSSAVLKGKLAPIYLFHGPHGIGKTSAARIFAASLNCHSSGGNQPCGHCEECMAIFSGNSSSVIEIDASKLDCKSRVAALLRNACEVPASSHFKVLIVDDCQHMDKEGWYSVYSSLEGIPDSSIFVMITSDIDKLPSNSVGWCQSYRFCKVDEAEIALRLSRICINEGMEFEAEALELIARKANGSIRDAVQMLDQLTLLGKRISKSVTYDLIGDVSDEELLDLLNLAFSSDAATIVRRARELLSSKVDPLQLLAQLANLIMDILAGRHQSDSQEVRKVTGKHTSAEIDVHKLRNALEILSETEKQLKTTKNQSTWLTAALLQFNMREPYCLDDAAVSSMFTESQTDDGAAILKDESLDTSSHLCYQNKIGCLDMNLGDPDVLETIWIKALENCTSKPLHSLLRKDGKLSSLYTTQGVAVAELQFCHPEDVPTTESFWNPFVVSLQNLLKCNVDIRINLSPISTSNRVVSKNSSVSLVMQSREDQETEDPVAAGCRTVASSRKECPSPLAVQPKEKPSHILGCLHATDGDAVDTESRILSYQKISVIPEASTPGNGSFKAGGHTPKVDEARARRGCFSKLLQRRAGAPYQNGALPRRGLFKCCFCKIRPDCKTKVEETDGFQGHSKN</aaseq>

Gene Sequence

<dnaseqindica>1..12#218..1393#1509..1725#1968..2153#2309..2518#2937..3571#ATGGCAATGCTGGTTAGGTAAAACCGCAGGTAGCGATTGTTTCTGCAGATTTTGCGTTGATGGTTTCTCTGCTCCTTGCATACAAGATCGAAAAAAGATTAGTTTTTTTGTGGAGTGTGCACCATGTTTGAAGATTGTGTTGACTGTGCAATGCCTAATTGCACATCCTTTCTCTACTGAAGACTGAATTGTTCCTCGTTATTTATCTGCATTGCAGCATAGTTCATTGGGGCCTTGCAAGATGATTGAGGGGAGGAGGCACTCCGTTGACATCCCGATTTCGAGGGCTCTACTGGCCGTCATGAGGTCCAGATCTCTGAGGGACCCTGAGACCAACTCGCTGGCCAAGTTCTCGGCGAAGAAGACCATCTGGGAGGGTTGTTCTCTCGAGGAAGATGACCTGGAGGGGAGCAATTATGGTAGGCACAGCTTTAGTTACAACATGTATGATCATCTCCAGAGGAGGAGGGAGGAGTTTGGGGACAGCGCGAGGTCTGGTCGGCTGGTGAACTCGCCGATCAACATCATCAAGGCCAATGCGAGGGTCAAGGCGGCGCTTCATAACCAGACCTGCTCCTCGGTGATCTCGGGGATGTCAAGGGCAACAAAGGACAGGGCATCCTCTTTGATGATTGAAGGAGAGCAATTGGGTCGGAGGGAGGGAGCTACATTTCAAGAAAGCGCGAGAAGTTTGCTTCAAAAGTACCGGCCCAAGGCTTTCTCTGAGCTGGCTGGACAAAATGTTGTTGCTCAGTCTCTTTCAAGTGCTGTTTTGAAAGGAAAACTTGCTCCAATCTATCTCTTCCATGGTCCACATGGCATAGGAAAGACATCTGCAGCTAGAATATTTGCCGCATCACTGAATTGCCACTCTTCAGGTGGGAACCAGCCTTGTGGGCACTGTGAGGAATGCATGGCCATATTCTCAGGAAACAGTAGCAGTGTGATAGAGATTGATGCTTCTAAACTGGATTGCAAATCTAGAGTTGCTGCCTTGCTGAGGAATGCCTGTGAAGTTCCTGCTTCTTCGCACTTCAAGGTTCTTATTGTGGATGATTGCCAACACATGGATAAGGAGGGATGGTACTCTGTCTACAGTAGCCTTGAAGGCATCCCTGACAGCTCAATCTTTGTGATGATCACATCTGACATTGATAAACTGCCAAGTAATTCAGTTGGATGGTGCCAGAGCTACAGGTTTTGCAAGGTAGACGAAGCAGAGATCGCCCTCCGATTGAGTAGGATTTGCATAAATGAAGGTATGGAGTTCGAGGCCGAAGCACTGGAGCTTATTGCTCGCAAGGCCAACGGTTCCATTCGAGATGCAGTTCAAATGCTTGACCAGCTTACTCTGCTAGGAAAAAGGATCAGCAAATCAGTAACATATGACCTAGTAAGTTAATCAATCAGCTTTTCTAGCCTTGAAATATTTACCACCATAAAATAAATTGCCTTGTTTCATATTCAGTGAACATACATCAACTTGCTATGCTGTTTTTTTTTTTCAGATAGGCGATGTCTCAGATGAGGAGTTGCTTGATCTTCTTAATCTGGCTTTTTCATCGGATGCTGCTACCATTGTCAGGAGGGCTAGGGAGCTTTTGAGCTCAAAGGTTGACCCCCTGCAGTTATTAGCTCAGCTTGCAAATCTTATCATGGATATTTTAGCTGGGAGGCACCAGTCAGATTCCCAAGAAGTTAGAAAGGTTACTGGTAAACATACATGTATGCTCCTTCCCTCCCAAACAAACTTTAAAATTGTACAATCTACACACGGATTACCTGCAGATCTGTTATTGTTAATGCCGAACATAACACTGCAATATGGAGTCCTTATCTTGAAGATAATTCCAACCTTTAAACATGACATATTAGCTTAGCATTATTATATATGATAATTATTATGCTCACAGTTCACATTAATGTGTCATACACATATCATCTAATCCTGTATCTTAACTTTACAGCGGCTGAAATTGATGTGCACAAACTTAGAAATGCACTGGAAATACTTTCTGAAACTGAAAAGCAGCTGAAAACCACAAAGAACCAGTCTACATGGCTTACAGCAGCGCTGTTACAGTTTAATATGAGAGAGCCGTACTGCCTAGATGATGCTGCAGTTTCAAGCATGTTCACAGAGAGTCAGACAGGTAAATGGCATTCTCTACTTCATATGGTATTACATTAGTGTCAGTTATTTTGTACCCATGGGGGTTAATCTGTTTCCTGTATAATATCGTTATGGAACGAAACTCTGATGACTGAGTCACTTTCTCATGCTCACTGAAAGCTATTTATTATGCAGATGATGGGGCTGCTATCTTGAAAGACGAAAGCTTAGATACCAGTTCTCATCTTTGCTATCAGAACAAAATCGGTTGTTTAGATATGAACTTAGGAGATCCAGATGTGCTCGAGACCATATGGATTAAGGCTCTTGAGAACTGCACGTCTAAACCACTTCATAGTCTGTTGAGAAAAGATGGGAAGTTGTCATCCCTGTACACCACTCAAGGTAATCCATGTAACTGTGTGTTGGATCCTTTTTCTTCTGTTTTGTTTGGGAGGCAGATTCATTTGTCATCTTATCTATAACAAGAACATTTCCATACTTCCTACTATGTTTCCTGCTGATCCATCATACGTCTTATTCAGCCAGTTGATCAATGTTGCTTTCCAGAAAGCACATGTTTGTCTGAACTGATGTATGATGTGTCATGTATAGTAAACAGGTATATCTGTGGATAAGCTAGTGTTCTTGATAAGGTGGCAGATAATTGTCAGTATGCTTTTAACACATATCTTCCCATAGTTCTGTAGTAATTGCCGTTCAGCACTGGCCATGAATCCAAACTGCATGTTAGTAGCATCATTGCATGCCGGCACTGCAGAATTTTCAAGTCGAACTCATTCTGTTTAATTTTGGATTGCAGGTGTAGCAGTTGCTGAGCTGCAGTTCTGCCACCCCGAGGATGTACCTACAACAGAGAGCTTTTGGAATCCATTTGTGGTTTCTCTGCAGAATTTGCTAAAGTGCAATGTGGATATCAGGATCAATCTTTCCCCAATCTCCACCAGCAACAGAGTTGTATCCAAGAATTCATCAGTAAGCCTGGTCATGCAATCCAGAGAAGATCAGGAGACAGAAGATCCAGTTGCCGCAGGTTGCAGAACAGTAGCTTCATCAAGAAAAGAGTGCCCTTCTCCACTCGCGGTGCAACCAAAGGAGAAGCCGTCGCACATTCTGGGGTGCCTCCATGCTACAGATGGCGACGCGGTGGATACCGAGTCGAGGATCTTGAGCTATCAGAAGATTTCAGTCATACCTGAAGCATCCACTCCAGGAAATGGTTCCTTCAAAGCTGGAGGGCACACACCAAAGGTTGACGAAGCCAGAGCTCGCCGAGGCTGTTTCTCGAAGCTTCTACAGCGCCGTGCTGGTGCTCCTTATCAAAATGGAGCTTTGCCTCGCAGGGGACTGTTCAAATGCTGTTTCTGCAAGATCAGACCAGACTGCAAGACGAAAGTGGAAGAAACTGATGGGTTCCAAGGGCACAGTAAAAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027902