BGIOSGA027933

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Revision as of 07:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027933| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027933, complete gene.| tag = P0582D0...")
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Gene Name

BGIOSGA027933

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027933, complete gene.

LocusTag

P0582D05.138

Ensembl Transcript ID

BGIOSGA027933-TA

Ensembl Protein ID

BGIOSGA027933-PA

Length

5426

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1799581..1805006

Sequence Coding Region

1799581..1801552,1802849..1803711,1804344..1805006

Genome Context

<gbrowseImage1> name=IndicaChromosome08:1799581..1805006 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:1799581..1805006 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGCTGCGACTGCCAAGAGCGCCGACCACCGCGGCGCTCGCCGCCGGCGTCCCCCACCGGTTCCCGGCACCGGAGGGGGAGCCTCCGCCGCCGCGCGGCCCCAACAGGGCGCACCTCAACGCGCTGCTCACGTCGTACGGCCGCCGCGGCCGCCTCCGCGACGCCCAGCTCCTGTTCGACCAAATGCCCAGCCGCGACGTCATCTCCTGGACCGCCCTCCTCACCGCCTACGCCGACGGGGGAGACCTCGCCTCCGCGCGCCTCGTCTTCGACGACATGCCCCGCCGCAACGCCCCGTCCTGGAACGCGCTGCTCTCCGTCTACCTCCGCGCGGCGCGCCCGCGGGCTGCCCACGCGCTCTTCTACAAGATGCCGGCCAAGAACGCGGTGTCCTACGGTGCCATCATCTCCGGGCTCGCCAAGGCGGAGATGCTGCATGAGGCGGAGTTGGTGTATGAGGAGATGCCATGGCAGTGGCGTGACCCAGTAGGGTCGAATGCGCTGATGGCTGGGTACTTGAGGGTCGGGGAGCTTGCCATGGCACTGAGGGTGTTCGAGGGAATGACGGTGAGGGATGTCATTTCCTGGAGCGCCATGGTCGATGGCCTCTGTAAACATGGGAGTGTGTCAGAGGCGAGGAGGGTGTTTGACGCTATGCCAGAGCGGAATGTGGTGTCTTGGACTTCGATGATTCGGGGATATGTGAAACGTGGGATGTGCAGAGATGGTCTCCTCCTGTTCCTGAATATGAGAAGAGAAGGTGTTCAGGTTAACACAACGACACTCTCAGTTGCGCTGGATGCTTGTGCTGCGGCCAGTCTTGCCAGAGAAGGGATTCAGATTCACAATTTGATTATATCAATGGGATTTGAGCTGGATATTTTCTTGGGTGATTCAATAATCATAATGTATTCTCGTTTTGGTTGTATGGTTGATGCAAAAAGGGCGTTCGACTGCATGCAGCAGAAAGACATAGTATCATGGAACTCACTGATCACAGGTTACGTTCAGCATGACATGGTTGAAGAAGCACATGTGCTGTTCAAGTTGATGCATCAGAAGGATGCTGTTTCTTGGACATCAATGGTTGTTGGGTTTGCTAACAGGGGTTGGATGAGGGAATCTGTTGAACTTTTCGAGCAAATGCCAGTAAAAGACGAGGTCGCTTGGACTGCGATCATTTCTAGTTTTATCACAAATGGGGACTATCTAAGTGCAGTGCGGTGGTTTTGCCGCATGTCACAAGAAGGATGCAAACCTAACACAATAGCTTTCAGTTGTCTGCTGAGTGCTTTGGCTAGCCTGGCAATGTTGAATCAGGGAAGGCAAGCTCATGCATATTCGATCAACATGGGATGGGTGTTTGACTCTGCCGTTCACACTTCTTTGGTATCGATGTATGCAAAATGTGGAAGGTTGGCTGAGGCTTATCATGTTTTCTCAAGCATTAGCAACCCAAGCCTTATTGCTATTAATTCTATGATTACAGCATTTGTGCAACATGGTTTCGTTGAAGATGCGCTGAAACTATTTACCAAAATGCAAAATGCTGGATACAAGCCTAATCATGTTACATTTTTAGGAATTCTGACTGGTTGCGCACGTGCTGGTTTTGTTCAACAAGGTTACAACTACTTTGAATCAATGAGACCAGTTTATGGTGTAGAGCCAAACCCTGAGCACTACACATGTATGGTTGATCTTTTAGGTCGTGCAGGCCTCCTTGCTGAAGCACTGGAAATGATTAACTCAATGCCCCAGAATGATCATTCTGATGCATGGGCAGCTTTGCTCAGTGCTAGTAGTCTCCATTCTAATCTCGCTTTTGCAAAAATAGCAGCACAGAAGCTTCTTGAGAAGGATCCTTACGATGCAACGGCTTACACAGTCCTGTCAAGGATGTTCTCCTCAGCAGGGATGGAGGATGAAGAAATGCTAAAAGTTGTACAGCTATCCAACTTGGCCATGTCCTGGAAAAAGCTCAATTGCATGAGGCGAAGGCTTCCACCTGGACCTCCAAGGTGGCCCATCTTTGGTAACCTTCTCCAGTTGAGCCCTCTTCCCCACAAAGACTTCGCTCGATTCTGCACCAAGTATGGCCCCCTGGTCTATCTTCGTCTTGGAACCATCGATGCCATCACCACTGATGACCCTGAAGTCATCCGTGAGATACTCATCCGGCAAGATGAGGTATTTGCTTCACGGCCTCGGACCTTGGCCGCTGTTCACCTTGCCTATGGGTGCGGTGATGTGGCCCTTGCTCCGCTGGGGCCGAACTGGAAGAGGATGAGGAGGGTTTGCATGGAGCACTTGCTGACAACCAAGCGGCTTGAATCTTTTGCTGCTCACCGAGCACTGGAGGCTGAGCACCTCTGTCAGTTTGTGTGGGCTAAAGCCCAGTCAGGGAAACCTGTGAATCTCAGAGAGGTTCTTGGGGCCTTCTCGATGAACAACGTGACAAGGATGTTGCTAGGGAAACAGTACTTTGGTCTGCAGTCAGCAGGCCCTGGTGAAGCAATGGAGTTCATGCACATCACCCATGAACTGTTCTGGCTGCTGGGCCTGATCTATCTTGGGGACTACTTGCCAGCCTGGAGGTGGCTTGATCCATATGGGTGTGAGAAGAAGATGAGGGAGGTTGAGAAGAAGGTGGACGACTTCCACCAGAAGATTATTGATGAGCACAGGAAGGCTAGGGAGGCCAAGAAGAGTGCATCCCTTGATGATGATAACAAAGAAGACATGGACTTTGTTGATGTACTGCTTTCTTTGCCCGGCGAGAACGGAAAAGAGCACATGGACGACGTCGAGATCAAAGCTTTGATGCAGGACATGATTGCTGCTGCCACCGACACATCATCGGTGACCAACGAGTGGGTGATGGCGGAGGTGATCAAGAACCCCCGGGTGCTCCGCAAGATCCAGGAGGAGCTCGACGGCGTCGTCGGCCGCGGCCGCATGGTGGCGGAGTCGGACCTCGGCCAGCTGACCTACCTCCGGTGCGTCGTCCGCGAGTCCTTCCGGATGCACCCGGCGGGGCCATTCCTGATCCCCCACGAGTCCCTGAAGCCGACGACGATCATGGGCTACGACATCCCGGCGCGGACGAGGATCTTCATCAACACCCACGCGCTCGGCCGGAACACCCGCATCTGGGACGACGTCGACGCGTTCCGGCCGGAGAGGCACCTGCCGGCAGCGGCGGACGGCGGCCGGGTGGAGATCAGCCACCTGCCGGACTTCAAGATCCTCCCCTTCAGCGCCGGCAAGCGCAAGTGCCCCGGCGCGCCGCTCGGCGTCATCCTGGTGCTCATGGCGCTCGCCAGGCTCTTCCACTGCTTCGACTGGTCGCCGCCGGACGGCCTCCGCCCCGACGACATCGACACCCAGGAGGTGTACGGCATGACCATGCCCAAGGCCAAGCCGCTCGTCGCCGTCGCCACGCCGCGCCTGCCGCCGCAGATGTACGGTCGCCATGGCAAGCAAGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MAALRLPRAPTTAALAAGVPHRFPAPEGEPPPPRGPNRAHLNALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAPSWNALLSVYLRAARPRAAHALFYKMPAKNAVSYGAIISGLAKAEMLHEAELVYEEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGCMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVAWTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLIAINSMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATAYTVLSRMFSSAGMEDEEMLKVVQLSNLAMSWKKLNCMRRRLPPGPPRWPIFGNLLQLSPLPHKDFARFCTKYGPLVYLRLGTIDAITTDDPEVIREILIRQDEVFASRPRTLAAVHLAYGCGDVALAPLGPNWKRMRRVCMEHLLTTKRLESFAAHRALEAEHLCQFVWAKAQSGKPVNLREVLGAFSMNNVTRMLLGKQYFGLQSAGPGEAMEFMHITHELFWLLGLIYLGDYLPAWRWLDPYGCEKKMREVEKKVDDFHQKIIDEHRKAREAKKSASLDDDNKEDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSSVTNEWVMAEVIKNPRVLRKIQEELDGVVGRGRMVAESDLGQLTYLRCVVRESFRMHPAGPFLIPHESLKPTTIMGYDIPARTRIFINTHALGRNTRIWDDVDAFRPERHLPAAADGGRVEISHLPDFKILPFSAGKRKCPGAPLGVILVLMALARLFHCFDWSPPDGLRPDDIDTQEVYGMTMPKAKPLVAVATPRLPPQMYGRHGKQV</aaseq>

Gene Sequence

<dnaseqindica>1..1972#3269..4131#4764..5426#ATGGCCGCGCTGCGACTGCCAAGAGCGCCGACCACCGCGGCGCTCGCCGCCGGCGTCCCCCACCGGTTCCCGGCACCGGAGGGGGAGCCTCCGCCGCCGCGCGGCCCCAACAGGGCGCACCTCAACGCGCTGCTCACGTCGTACGGCCGCCGCGGCCGCCTCCGCGACGCCCAGCTCCTGTTCGACCAAATGCCCAGCCGCGACGTCATCTCCTGGACCGCCCTCCTCACCGCCTACGCCGACGGGGGAGACCTCGCCTCCGCGCGCCTCGTCTTCGACGACATGCCCCGCCGCAACGCCCCGTCCTGGAACGCGCTGCTCTCCGTCTACCTCCGCGCGGCGCGCCCGCGGGCTGCCCACGCGCTCTTCTACAAGATGCCGGCCAAGAACGCGGTGTCCTACGGTGCCATCATCTCCGGGCTCGCCAAGGCGGAGATGCTGCATGAGGCGGAGTTGGTGTATGAGGAGATGCCATGGCAGTGGCGTGACCCAGTAGGGTCGAATGCGCTGATGGCTGGGTACTTGAGGGTCGGGGAGCTTGCCATGGCACTGAGGGTGTTCGAGGGAATGACGGTGAGGGATGTCATTTCCTGGAGCGCCATGGTCGATGGCCTCTGTAAACATGGGAGTGTGTCAGAGGCGAGGAGGGTGTTTGACGCTATGCCAGAGCGGAATGTGGTGTCTTGGACTTCGATGATTCGGGGATATGTGAAACGTGGGATGTGCAGAGATGGTCTCCTCCTGTTCCTGAATATGAGAAGAGAAGGTGTTCAGGTTAACACAACGACACTCTCAGTTGCGCTGGATGCTTGTGCTGCGGCCAGTCTTGCCAGAGAAGGGATTCAGATTCACAATTTGATTATATCAATGGGATTTGAGCTGGATATTTTCTTGGGTGATTCAATAATCATAATGTATTCTCGTTTTGGTTGTATGGTTGATGCAAAAAGGGCGTTCGACTGCATGCAGCAGAAAGACATAGTATCATGGAACTCACTGATCACAGGTTACGTTCAGCATGACATGGTTGAAGAAGCACATGTGCTGTTCAAGTTGATGCATCAGAAGGATGCTGTTTCTTGGACATCAATGGTTGTTGGGTTTGCTAACAGGGGTTGGATGAGGGAATCTGTTGAACTTTTCGAGCAAATGCCAGTAAAAGACGAGGTCGCTTGGACTGCGATCATTTCTAGTTTTATCACAAATGGGGACTATCTAAGTGCAGTGCGGTGGTTTTGCCGCATGTCACAAGAAGGATGCAAACCTAACACAATAGCTTTCAGTTGTCTGCTGAGTGCTTTGGCTAGCCTGGCAATGTTGAATCAGGGAAGGCAAGCTCATGCATATTCGATCAACATGGGATGGGTGTTTGACTCTGCCGTTCACACTTCTTTGGTATCGATGTATGCAAAATGTGGAAGGTTGGCTGAGGCTTATCATGTTTTCTCAAGCATTAGCAACCCAAGCCTTATTGCTATTAATTCTATGATTACAGCATTTGTGCAACATGGTTTCGTTGAAGATGCGCTGAAACTATTTACCAAAATGCAAAATGCTGGATACAAGCCTAATCATGTTACATTTTTAGGAATTCTGACTGGTTGCGCACGTGCTGGTTTTGTTCAACAAGGTTACAACTACTTTGAATCAATGAGACCAGTTTATGGTGTAGAGCCAAACCCTGAGCACTACACATGTATGGTTGATCTTTTAGGTCGTGCAGGCCTCCTTGCTGAAGCACTGGAAATGATTAACTCAATGCCCCAGAATGATCATTCTGATGCATGGGCAGCTTTGCTCAGTGCTAGTAGTCTCCATTCTAATCTCGCTTTTGCAAAAATAGCAGCACAGAAGCTTCTTGAGAAGGATCCTTACGATGCAACGGCTTACACAGTCCTGTCAAGGATGTTCTCCTCAGCAGGGATGGAGGATGAAGAAATGCTAAAAGTTGTACAGCTATCCAACTTGGCCAGTAAGAGGCCTGGTTATAGCCTTATTATGCAGGATAAGGCCACTGAAATATAACACATACTGAGAACCTTCTAGTTGACTAGTTCTAGATCTCTGACCGATGAAAACAAGAATGATCATGTTACATGGCACTGCTAAATGAGAATTAGGATGGCATAAAAAAGATATCACATGACTTGTACATAATGCCTAAAATGTGGATATCTGACCAGGTGCTTGGTGATATGCTGTTGGCCCAGAACTCGAGATCCATTTTTCTGGCAGGTCCTTATTTCTTATAGGATTAAGTTTGTCCATTTTGATGCAGCTGAGTTTTCACCCTTAACTATGAAATCATCTAACTTGCACTCTTCAACTACCAAAATGGGCACAAATAACTCCTTTTCACCACAAAAAAATGTCTTATTTGGCCAGAATAACACTGGTGGTTTTAAGGGTAGGGGTTACACTGATTTTGATAGTTAAAGGGTGAACAATAGATCCTTTCTTTTCTGAGGGTAACAATTAGATAGTATTGTAGTTCATGAATTTACAGTATTTGTTATTTAAGACCTGTCATAATCTTTATATTGATTCCATCTTCTTTTTAAAGTTTAGACAGTAAATGGAAGATTGATACACGGAATTCATCTGCTACAGGAAAGCATTGAAGAATAGTTGTATTGTTGGTTGCTGTTTGCTTAAATTCAAGAACATTTATGCAGGAGATTGTCTTCCGATCATCAATTGATGAAGAAGCCAGTTCATGAGTCATGTCTGCATGTTATTTGTGGTAGATGAAGTAGGAGATGTATTCTAAATAGCTACCATCAAGATACAGTCATGTTGACAGGAAAAGGCAGAGCACCAATCGTCAATAGTATAATCTTGCTCCTGAATGTCATCTATGCGTTACTTACAGAAATGTGCAAAAAATGAATTGCACTGAGCACATTGCTGAATAACAGTATGGAAGAGAACTTTTTTTTGGGTGAGCACATCTGAAGAGACTTTCTTTTATATTCATTCCCTCTTCTTTTTCCTTGGCATTTTCAGTGCTCTGCATCACACCATCTGTCATGTCAAGATCATGACGTTTATTATATGATGTTAGTTGAGATGTTGAACAATATAGATCAGCACAAGAATCATGACCAGTCTAATTCTGTAACCAATTCGCTTCAACTTTAGTCACTTGATTTGCTTTATCATAGAGCTTGATGAGATCCCATAAATAGGACTATAATTGCCATCTGTTTCTGTACCATGGATACTTTTCTTCTTTCCATCATCTTATGCTCATGGATCTTTGTTGTAGTGTCCTGGAAAAAGCTCAATTGCATGAGGCGAAGGCTTCCACCTGGACCTCCAAGGTGGCCCATCTTTGGTAACCTTCTCCAGTTGAGCCCTCTTCCCCACAAAGACTTCGCTCGATTCTGCACCAAGTATGGCCCCCTGGTCTATCTTCGTCTTGGAACCATCGATGCCATCACCACTGATGACCCTGAAGTCATCCGTGAGATACTCATCCGGCAAGATGAGGTATTTGCTTCACGGCCTCGGACCTTGGCCGCTGTTCACCTTGCCTATGGGTGCGGTGATGTGGCCCTTGCTCCGCTGGGGCCGAACTGGAAGAGGATGAGGAGGGTTTGCATGGAGCACTTGCTGACAACCAAGCGGCTTGAATCTTTTGCTGCTCACCGAGCACTGGAGGCTGAGCACCTCTGTCAGTTTGTGTGGGCTAAAGCCCAGTCAGGGAAACCTGTGAATCTCAGAGAGGTTCTTGGGGCCTTCTCGATGAACAACGTGACAAGGATGTTGCTAGGGAAACAGTACTTTGGTCTGCAGTCAGCAGGCCCTGGTGAAGCAATGGAGTTCATGCACATCACCCATGAACTGTTCTGGCTGCTGGGCCTGATCTATCTTGGGGACTACTTGCCAGCCTGGAGGTGGCTTGATCCATATGGGTGTGAGAAGAAGATGAGGGAGGTTGAGAAGAAGGTGGACGACTTCCACCAGAAGATTATTGATGAGCACAGGAAGGCTAGGGAGGCCAAGAAGAGTGCATCCCTTGATGATGATAACAAAGAAGACATGGACTTTGTTGATGTACTGCTTTCTTTGCCCGGCGAGAACGGAAAAGAGCACATGGACGACGTCGAGATCAAAGCTTTGATGCAGGTATGTTTACTGTTTTTGTTATTCTAGTCTACTTCTAAGTTCATTTGTTTTTTAACTAAGCCATCACTGTGTTTGTTGTTATAGTCTATTCTTGAAATTGAAATGATTTGCTAGCTGCCATTATGTTTGCAACAAATCTAGCCACGTTAATGTTATCTCCTTTGAGATTCAACCAATAGATGACTTGGTTCTTTTAAAGAAAATAATAAAAGGGAAGGTAATTAAAGATCTGTTTTCACAGCAGAGTTTTTGGTTCTTCTGTTGTTATGAGCTATGTTTGCTTTTCGGATTGAATTTATCTGTTACTTCTGGCAAACCATGTTATTTCATTTCTAGTGCTACATGTTGGAACCACAGTGAAGTGATGGACAGTACAAAGTACAAACTATCCTTTCTTGTCCTGGAGACTACAAGAAAATTAGAAGTAAAGAAATGATAGATTTTCTGAAAGTAAACTAGAAGAAAACATGTTGAACAACCTGTATTATTCTTCAACATTATGTGCATGCTAGCGCTACTAGTATACAACTGCATTTTTCAGTATCAGAAATCTTGCATAAGACATCAAATTAGTCATAAGCAATTCTGTTCTAAGTAGACAAAAACAAAACTAATCCATGTACACAACACAGGACATGATTGCTGCTGCCACCGACACATCATCGGTGACCAACGAGTGGGTGATGGCGGAGGTGATCAAGAACCCCCGGGTGCTCCGCAAGATCCAGGAGGAGCTCGACGGCGTCGTCGGCCGCGGCCGCATGGTGGCGGAGTCGGACCTCGGCCAGCTGACCTACCTCCGGTGCGTCGTCCGCGAGTCCTTCCGGATGCACCCGGCGGGGCCATTCCTGATCCCCCACGAGTCCCTGAAGCCGACGACGATCATGGGCTACGACATCCCGGCGCGGACGAGGATCTTCATCAACACCCACGCGCTCGGCCGGAACACCCGCATCTGGGACGACGTCGACGCGTTCCGGCCGGAGAGGCACCTGCCGGCAGCGGCGGACGGCGGCCGGGTGGAGATCAGCCACCTGCCGGACTTCAAGATCCTCCCCTTCAGCGCCGGCAAGCGCAAGTGCCCCGGCGCGCCGCTCGGCGTCATCCTGGTGCTCATGGCGCTCGCCAGGCTCTTCCACTGCTTCGACTGGTCGCCGCCGGACGGCCTCCGCCCCGACGACATCGACACCCAGGAGGTGTACGGCATGACCATGCCCAAGGCCAAGCCGCTCGTCGCCGTCGCCACGCCGCGCCTGCCGCCGCAGATGTACGGTCGCCATGGCAAGCAAGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027933