BGIOSGA027936

From RiceWiki
Revision as of 07:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027936| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027936, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027936

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027936, complete gene.

LocusTag

OSJNBB0009H02.36

Ensembl Transcript ID

BGIOSGA027936-TA

Ensembl Protein ID

BGIOSGA027936-PA

Length

2363

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1852721..1855083

Sequence Coding Region

1852721..1852934,1853104..1853403,1853532..1853749,1854466..1855083

Genome Context

<gbrowseImage1> name=IndicaChromosome08:1852721..1855083 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:1852721..1855083 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGACGAAAGCGAGAGGGGCGGTATGGTAATCGACGACGTCGGCGGCGGCGGACTGAATCTTGCAATTGTTGCAGGCAAGCGTAAGCGGGAGCTCACATGGGAAGAGAAGGCGTTGACAGTTCTTGATATTGTCGGGTCCCAACAGCACCCCGCATGCCAACCTGCCGAGCGTGATTGCAGCCTCATAGACTCGGAGAAAGATTACTCATCTATGGCCGGCTGCCAGGCCGGAGAACACGCTAGTATATTTGGCATTGACAAGAATGGGGATGATTCTGATGAACCGTGTGCTAAGGATGATGCCAAGCAAAGTGATGTGGCTCCTCTGAAGGAGGAGGAGAATTGGGAGCTGGACAGTGAACCAGAGCTCACATGGGATGAGAAGGTGGTTGAAGTTCTAAACATAGTTCGACGCCGAGAGATCACCGAATATAACCCCAAGCAGTTTTGCTCAATTCCTACTCGATTTTGTGCCTACAACATAGCCTTCTTTGACCTGGACAAAGAGTCAAAGCTTGCACGTGGACCACCTATCAAGTCACTAGCTTTCCCCGACTACTGGTGGGAGATGGACTCTGTCAATGTGATTGCAATCAAGGTGGCCGAGTCTGATGTGGGTTACCCTATCAGGGTATTTGGCACTGTGCTGGCCAGGGATGAGTACGATTTCAGGTGTGTCTATTTGTTCAGGCGTGACAGGAACAATCCACAGATCATCACCTCGCCGGAGGACACACTAACTCTGACAGGACCTAATCGAGCGCTGGGTGCAATAGACCCCATGTATTTCGAGTTCAATTTGAAGATTAGAGACGGTGATGTCGACAAAGATTTCTGCAAAGGTGTGCGAGAACACAATGCCATCTGCTATACAAAGCAGCCGATGACTTTATCGCTAGAGAGCTGCCTGAGTAGAATTGATTTTGTGTATAGTCCTGTTCAATTAGCTGTGGAAGCTTCTGTTGCAGTCAAAATTAAGGGGGTTGTATCCAAGTTTTTCACTGGCAAAGTGACTGCTTGGACTACTGGAGATGATCAGAACAAAATCATCCTGTATGACAGTGAAGTGGAAGGCAGGAACAGAGTTCTTGGAGCTGATGGATCAGTCGATCTGACTCGCTGTTTCGTAGCCGTCAATTTGGATGATGAACTGGTGCTCAATGTCTGTGTTTCTGAAGGAGCTGGCTCAATCTTTGAGCTCGTTCTTGGACACAATGATGAAGAATGTGTCCTTGAGCAAGGTCCCTATGAACTGCAGGTGAATGTTGTTTGGACAGCTGCCTTGAAGCATCGACAGCGCAGAAAATTGTTTGAGCGTATCGGTGACTTCCGCGTGTTAAGGTGA</cdnaseq>

Protein Sequence

<aaseq>MADESERGGMVIDDVGGGGLNLAIVAGKRKRELTWEEKALTVLDIVGSQQHPACQPAERDCSLIDSEKDYSSMAGCQAGEHASIFGIDKNGDDSDEPCAKDDAKQSDVAPLKEEENWELDSEPELTWDEKVVEVLNIVRRREITEYNPKQFCSIPTRFCAYNIAFFDLDKESKLARGPPIKSLAFPDYWWEMDSVNVIAIKVAESDVGYPIRVFGTVLARDEYDFRCVYLFRRDRNNPQIITSPEDTLTLTGPNRALGAIDPMYFEFNLKIRDGDVDKDFCKGVREHNAICYTKQPMTLSLESCLSRIDFVYSPVQLAVEASVAVKIKGVVSKFFTGKVTAWTTGDDQNKIILYDSEVEGRNRVLGADGSVDLTRCFVAVNLDDELVLNVCVSEGAGSIFELVLGHNDEECVLEQGPYELQVNVVWTAALKHRQRRKLFERIGDFRVLR</aaseq>

Gene Sequence

<dnaseqindica>1..214#384..683#812..1029#1746..2363#ATGGCGGACGAAAGCGAGAGGGGCGGTATGGTAATCGACGACGTCGGCGGCGGCGGACTGAATCTTGCAATTGTTGCAGGCAAGCGTAAGCGGGAGCTCACATGGGAAGAGAAGGCGTTGACAGTTCTTGATATTGTCGGGTCCCAACAGCACCCCGCATGCCAACCTGCCGAGCGTGATTGCAGCCTCATAGACTCGGAGAAAGATTACTCATGTGAGTGTATATATAATCCACAACTAATCGATCGATCATTCATCATTCATGTACATCTGTTCTGCTTAGTTCACTCGTTTGCGTCAGTCAGTATATCCCTCTTAATTGGTTTTTTTTTCTTGTTTGTTGGATGGGAAACATCAAAACCAAAACTTTGCTTGTTTTGCAGCTATGGCCGGCTGCCAGGCCGGAGAACACGCTAGTATATTTGGCATTGACAAGAATGGGGATGATTCTGATGAACCGTGTGCTAAGGATGATGCCAAGCAAAGTGATGTGGCTCCTCTGAAGGAGGAGGAGAATTGGGAGCTGGACAGTGAACCAGAGCTCACATGGGATGAGAAGGTGGTTGAAGTTCTAAACATAGTTCGACGCCGAGAGATCACCGAATATAACCCCAAGCAGTTTTGCTCAATTCCTACTCGATTTTGTGCCTACAACATAGCCTTCTTTGACCTGGACAAAGAGTGTGAGTACATCCATCCATTTGTTTGTTATAATATCATCCTTGTTCCTTGTTCATTCTTTGATTATTGTACATGTCTTAAAAAAATTTACTTTCCTGGTTTGATTTATGTCTCTGGCTTGATTTTGCAGCAAAGCTTGCACGTGGACCACCTATCAAGTCACTAGCTTTCCCCGACTACTGGTGGGAGATGGACTCTGTCAATGTGATTGCAATCAAGGTGGCCGAGTCTGATGTGGGTTACCCTATCAGGGTATTTGGCACTGTGCTGGCCAGGGATGAGTACGATTTCAGGTGTGTCTATTTGTTCAGGCGTGACAGGAACAATCCACAGATCATCACCTCGCCGGTATGTTACTGATTCGTTCCTCCTCCTTGCTAGATTAATACTATTTATTGTTCAAATCCATATGCCATTGCCTTTTCAATCCGCTGTCTGATATTCTACACTATAAATGACCTGTTAATTAGGCTCACATTGTTAAGTGAAATGTGGACGGTTGCATAGTTCCATAATGGCTGGTGAAATGCCTGATACGATAGAAATCCTGTTTCCTGGCCATTAAAATCCCTACTGCCAGATCTTAAACCTTGCTGTCAATATCGTATATCCACTGAATCTGATTGCCTGGTAGTCCATTCCTGCTGTCTAAGAGGGTCAGGACAGTTACTGTTGGAACATCAATCAATCCATGACTTCCCCTTTTTTTTGTGAGATTTGATTTACTTATTTAGTTTCTATATCCCAAGACCGTGGTACTTTTACCTGTTATACTATTTTGTTAATCCAGTGCAACGGTAGTGCTCTGGGATCATGTACGTTTTGTACTGGAAAAAAGTGGAAACAAAAGAATTTATATTGGCATGTTGCTCATTTGAACATGGGAGTTTGAAATGCAATTCACAGGCTGTTCATAACTTCATAGACCTAAAATTATTATCTGTATGTATTATGTACCCAAATTTCTCTTAACATATTGTTGGCCTGTCTGAACTGTATTTGACTTATCGAGCCTAGTGTTTCTGGTGGCATTTCTGACATGATTTTCCCTAATCTATTTATAGGAGGACACACTAACTCTGACAGGACCTAATCGAGCGCTGGGTGCAATAGACCCCATGTATTTCGAGTTCAATTTGAAGATTAGAGACGGTGATGTCGACAAAGATTTCTGCAAAGGTGTGCGAGAACACAATGCCATCTGCTATACAAAGCAGCCGATGACTTTATCGCTAGAGAGCTGCCTGAGTAGAATTGATTTTGTGTATAGTCCTGTTCAATTAGCTGTGGAAGCTTCTGTTGCAGTCAAAATTAAGGGGGTTGTATCCAAGTTTTTCACTGGCAAAGTGACTGCTTGGACTACTGGAGATGATCAGAACAAAATCATCCTGTATGACAGTGAAGTGGAAGGCAGGAACAGAGTTCTTGGAGCTGATGGATCAGTCGATCTGACTCGCTGTTTCGTAGCCGTCAATTTGGATGATGAACTGGTGCTCAATGTCTGTGTTTCTGAAGGAGCTGGCTCAATCTTTGAGCTCGTTCTTGGACACAATGATGAAGAATGTGTCCTTGAGCAAGGTCCCTATGAACTGCAGGTGAATGTTGTTTGGACAGCTGCCTTGAAGCATCGACAGCGCAGAAAATTGTTTGAGCGTATCGGTGACTTCCGCGTGTTAAGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027936