BGIOSGA027973

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Revision as of 07:51, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027973| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027973, complete gene.| tag = P0025F0...")
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Gene Name

BGIOSGA027973

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027973, complete gene.

LocusTag

P0025F03.25

Ensembl Transcript ID

BGIOSGA027973-TA

Ensembl Protein ID

BGIOSGA027973-PA

Length

2628

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:2534073..2536700

Sequence Coding Region

2534073..2534376,2535616..2535824,2536062..2536700

Genome Context

<gbrowseImage1> name=IndicaChromosome08:2534073..2536700 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:2534073..2536700 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGCGTGACGGCGCGCCGCCGGCGAGCGGCGGCGGCGGGGCGGCGGAGGGGCCGAGGCGGTGCTCGCAGTGCGGGCACCACGGGCACAACGCGCGGACGTGCACGGCGAGGGGCCCCGTGAAGCTGTTCGGCGTGCGGATCGGCGACAAGCCGCCGACCGCGGCCGCGGGCGGAGGAGGAGGGATGAGGAAGAGCGCCAGTATGGGGAGCCTCGCGCAGCTGGCGGAGGGGGGCGGCGGCGGCGGCGGGAGGGAGGAGGGGTACGGCTCCGATGGGAACGACGACAAACGGCGGAAGCGAGGTGAGGCATGGTCAGAAGAGGAGCACAAAAAGTTTCTACTTGGGCTTAGTAAGTTAGGAAAAGGTGATTGGCGTGGCATATCACGCAATTATGTTGGTTCAAGGACGCCTACTCAAGTTGCTAGCCATGCTCAAAAGTACTTCATTCGCCAAACAAATGTGCACAGGAGAAAAAGAAGATCAAGCCTTTTCGATATGGTTATAGATGATTCTGATGACCAACCACTCTCCCGTACATCTTCACAAGAAGTAGAAGTAGAAGAGAATCTAGAAGATGGACATCCTGTTACTGCACCAGTGATCCCACCTGCTCCTGTGCCTATGCTATCATCCTCTTTGGTTCCGCCACCAGTACCAGCAATGGCACCAGTTGCTCCAGGTCCTGTGTTAACATCTGCTTCGGCCACACTACCAGTGTCAGCAGTGGCACCCCAAACCGATGAAAAGGAACAAGTTGCCTCAGGTTCAAATACAACAGAGACAGGGGCTGCAATTCCAGAAGTCATGCCCCCGTATGGTTATCCAATGATGCTTCCTCCATACTACCCACCGGCATTTGTTCCAATGCCCTACTATGGTTATGTGCCTGTTTTCTATGCACCACCAGGAGCAGTGCAAGCACAACATGAGGTTGTCAAGCCTGTGGCCGTGCACTCAAAACCTCCAGTGCACATCGATGAACTCTACAGCATGTCTGAACTCAGCCTGAAGGGCGAGGCTGGTGTGAAAAACGGCACTCCTAATTCTCCGTTGCCTCCAAGACCAATTGGTAGACCAGACAGGCAATCTGCTTTTCATGGAAAAGGACCTTCTGATGGCTCTTCAAATGGACTGATTCCTGCGAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MTRDGAPPASGGGGAAEGPRRCSQCGHHGHNARTCTARGPVKLFGVRIGDKPPTAAAGGGGGMRKSASMGSLAQLAEGGGGGGGREEGYGSDGNDDKRRKRGEAWSEEEHKKFLLGLSKLGKGDWRGISRNYVGSRTPTQVASHAQKYFIRQTNVHRRKRRSSLFDMVIDDSDDQPLSRTSSQEVEVEENLEDGHPVTAPVIPPAPVPMLSSSLVPPPVPAMAPVAPGPVLTSASATLPVSAVAPQTDEKEQVASGSNTTETGAAIPEVMPPYGYPMMLPPYYPPAFVPMPYYGYVPVFYAPPGAVQAQHEVVKPVAVHSKPPVHIDELYSMSELSLKGEAGVKNGTPNSPLPPRPIGRPDRQSAFHGKGPSDGSSNGLIPAK</aaseq>

Gene Sequence

<dnaseqindica>1..304#1544..1752#1990..2628#ATGACGCGTGACGGCGCGCCGCCGGCGAGCGGCGGCGGCGGGGCGGCGGAGGGGCCGAGGCGGTGCTCGCAGTGCGGGCACCACGGGCACAACGCGCGGACGTGCACGGCGAGGGGCCCCGTGAAGCTGTTCGGCGTGCGGATCGGCGACAAGCCGCCGACCGCGGCCGCGGGCGGAGGAGGAGGGATGAGGAAGAGCGCCAGTATGGGGAGCCTCGCGCAGCTGGCGGAGGGGGGCGGCGGCGGCGGCGGGAGGGAGGAGGGGTACGGCTCCGATGGGAACGACGACAAACGGCGGAAGCGAGGTGAGGAATTCTTTCTCTTTTTTTCTTCCCTCCTTTGAATCCTGATTTTCTGTCTTGTTGATTCTTGGCTTGGTGTGGTTCCTGCGTGTCATGGTATTCATTGCAATGTAACAGAGAAGATACCTTGATGAGAAAGATGCTACTAGATTAGATTGTGATTAAATTGCCTGTTGATACGGCAAGTTTTACCTGTGTGCGGATGAACTGTTTTGATGTGGAGGTGTAATTTCGGTGTTTACTGCAAGATGGTTGAATTCAATTGCAGAAATAGCTGATTAGATGTGTGACAACTAAGGGAATTTTATGAGAATTAGCTGGAATAGTGTGACTACGTTTTAGATTGTTGTTGGATTTATGAACTGGGAAGTCTGGCGTGGTTTACTGTTGGGTGTTTAGTGGGTCGTTCCATAATACAGACATGGTCTGGTGTGGTGGTTCTGCAGTTTTTTTTTTTGACACCAGTCTGCAGAAATTTCAGTGATAAACAGCAAGGATTTATTAGCGTGAGATGTAATGATTTTTCAGAGTGCTTCGTCGGTTATAGGATTTTTGATGTAATAAAACAATGGATTATATTATCAATAAGTAAATGTAGTCTTATGAGCACAATTAAGAGATGTCATCATTGTAGCTTGGATGTTTAAGATGGTTGTGTCTCCACGGCGCTGTTTGGCTGCCCTTGCTGCAGCTGCAAGCCGGGCAACAGTGTTTCCTTGCCTGCACTGGCTGCAGCGCAGGCGCAGCAACGCCAACCGAACAGGCCCATGTCTTGTTTAATGATCCATTGTTATAGACTTGTAGATATACCTTTAGAGTGTAGACTGGTGAATCATTTCTTGTATTACTATATGTTCTGATTAAGTATCTAGGGTGCTAATTGGAGATTCTTAAACATTTCTATTTTCCTTCATCTCTCATTGCTATTGAGGCTTGTCATCTGTCACTCTATTTGCACTTAATTGCTCAAATTGTTGTATTACATCCCACAATTAAATTTTTTATTATTGTCCTCTGTTTTGTCTAGTTGGACCATCATGTGCATCCATGTTTTATATGTCCATGAATTCAAAGTGCCTTTTCATAATTTTGTGGTATTGTCATCTTTGGTATCTTTCTTTGTTCAACTGTGTGATTGGTATAGCACATGTTTCTGTTGTCTTTATGAAATTATGCTTGATTTAGCATTTGTTCGAGTATTTACATTTTGCATCAAACAATTTCATTTTGTTCTGCTGATAGGTGAGGCATGGTCAGAAGAGGAGCACAAAAAGTTTCTACTTGGGCTTAGTAAGTTAGGAAAAGGTGATTGGCGTGGCATATCACGCAATTATGTTGGTTCAAGGACGCCTACTCAAGTTGCTAGCCATGCTCAAAAGTACTTCATTCGCCAAACAAATGTGCACAGGAGAAAAAGAAGATCAAGCCTTTTCGATATGGTTATAGATGATGTGAGTATCTCTCCGTCTACTTCCTAGTGTGTTGCCTGCATGCACCATCTTGCAACTCCACTCACGTCAATATAACATGTTTGCTTACTCTTTCATATTTTTTTTCTTAATATTAAGCTGTGGTGTATCTGTAAATGTCACCAAATCATGACATGGCAATTTTTTTTCGAATAAAACCTTGGCAACATTTTTTGACTGAAGTATTTGCTTGTGTTCGTTTTTGTGCTTTTCAACCAGTCTGATGACCAACCACTCTCCCGTACATCTTCACAAGAAGTAGAAGTAGAAGAGAATCTAGAAGATGGACATCCTGTTACTGCACCAGTGATCCCACCTGCTCCTGTGCCTATGCTATCATCCTCTTTGGTTCCGCCACCAGTACCAGCAATGGCACCAGTTGCTCCAGGTCCTGTGTTAACATCTGCTTCGGCCACACTACCAGTGTCAGCAGTGGCACCCCAAACCGATGAAAAGGAACAAGTTGCCTCAGGTTCAAATACAACAGAGACAGGGGCTGCAATTCCAGAAGTCATGCCCCCGTATGGTTATCCAATGATGCTTCCTCCATACTACCCACCGGCATTTGTTCCAATGCCCTACTATGGTTATGTGCCTGTTTTCTATGCACCACCAGGAGCAGTGCAAGCACAACATGAGGTTGTCAAGCCTGTGGCCGTGCACTCAAAACCTCCAGTGCACATCGATGAACTCTACAGCATGTCTGAACTCAGCCTGAAGGGCGAGGCTGGTGTGAAAAACGGCACTCCTAATTCTCCGTTGCCTCCAAGACCAATTGGTAGACCAGACAGGCAATCTGCTTTTCATGGAAAAGGACCTTCTGATGGCTCTTCAAATGGACTGATTCCTGCGAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027973