BGIOSGA028005

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Revision as of 07:51, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028005| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028005, complete gene.| tag = OJ1066_...")
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Gene Name

BGIOSGA028005

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028005, complete gene.

LocusTag

OJ1066_B03.116

Ensembl Transcript ID

BGIOSGA028005-TA

Ensembl Protein ID

BGIOSGA028005-PA

Length

2784

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3228642..3231425

Sequence Coding Region

3228642..3231425

Genome Context

<gbrowseImage1> name=IndicaChromosome08:3228642..3231425 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:3228642..3231425 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGAAGGCGTGGTATTCGCTGCTCTATGCAAAATTGGATCTGTCTTGGCATCATCTGCAAGCATAACATTAGGTGGACGTTTAGATGCAAACTTGACAATAATAAATGAGATTGAGAGTCGAATAAAACAGATCGAAGTTGAGCTCAAGTTGATGCAAGCATTCCTGCGCCAAGCGCAAAAACAAGAAGGCTATAGCGAGCCCACTGAAGTCTACCTGCAGGAAGTAAGAAAAGCAGCTTTTGAAATTGAGGACATCATCGATGAGTTTCTTTACCTGTCTGTTAAGCACAAGAACAGGTTTTTCAATGGGGAGTTCATGAGTTACTTCCGTAAACTCGGTAAAACTTCTTGGCACAAAATTGCTAGAGAGCTGAAGGATTCGCAATGTCACCTTCAGAATCTCCGGAATTTGTGGGTGCAGTATGAGATTCAGCTTCCAAATGGCAATAGAGTTTCAACCGATGTGGAGGATCACCGGCTTCCGCATCATCTTTCTTACCCAGCTGATGAGATGGTGGGTGTTGAACAAGAAAGAACAATGATGATGAACTGGTTAAAAACATGTTCGACATCGGTTATCACTGTCTGGGGTATGGGAGGATCTGGGAAAACCACTCTTGCCAATAGTATCTATGAAGATGAGAGAATCAAGAATCAGTTTGATTGCCATATTTGGATCACAGTGTCTCAGAAGTTCAACGCTTCTGACATCATGAGGAAGATGGTACGTCACATGTTGCAACGGTGTTCACCCAACATTGATAGCATCGATGGTAGAGACCTGGTAGAAATCCTGAAGAGAACATTAGAACATAGAAAGATTTTGCTTGTACTAGATGATGTATGGAGCACAGATGTTTGGATGGACCTGGCAAGTACAGTTGAGAGAAGCAACAACAATGGAAATAAGGTCGTAATAACGACTCGGATCAAAGATGTCGCTTCTTTGGCAAGCGAAGATCAGGTTCTTCAGCTGCAAAAGCTGAATGATGCAGATTCTTGGTGTCTCTTTTGCAGGTGGGCATTCAAGAACCGCATTGATAGATCTTGTCCTCAAGAACTAGAGTCATTGGGGAGAGAGATCATGGCCAAGTGTGATGGTTTGCCATTAGCAATTGTGGTTGTGGGTAACATGCTCTCATTCAAGAAACAAGATATGGAAGAGTGGAGCAAATGCAATGATCAGCTAACCTGGGAATTACGCGACAGATTGCGCGACCAGGAGTTGAGTTCAGTGATGAAGATTCTGAAACTGAGTTATAAGAACTTACCGAGCCACCTAAAGAATGCATTTGTGTTCTGCAGCATCTTTCCAGAGGATTACATGATAACAAAGAAAAGGCTGGTCAGACTATGGGTTGCAGAGGGCCTCATTAAGCCGGAAAAGAGAAGAACAGTAGAAGAAGTCGCCGAGGAGTACCTGAATGAGCTGATAGACCGATGCCTGCTACAGGTTGTGGAGAGGAAGCACTTCAGAAAGGTGAAGGAATTCCAGATGCATGACATTGTGAGGGAGCTGGCCATTTCCATATCAGAGGACGAGACCTTCTGCATGACACATAGTAAATCGCACCCCGGTGAACCCGAATACAGGTGCCGTCGTTTGTCGATACATGAGCACAATGACAGGATCAAGTCGGTTTCAGATCCTTCTCGACTCCGCTCGCTCTACCATTTCGATGTAACCTGTTCTTCTTTTCCATCTGTGGGTACACCAAGAAGTGCAAGGTATCTGAATGTTCTGGAGCTGCAGGATGTTCCTATCACAGTTCTGCCAGAAGAATTGTCAGGCTTATTTAACTTACGGTACCTCGGTTTGAGAAGAACAAAGATCAAGCAGTTGCCACAATCAGTCGACAAGCTGTTCAATCTCCAAACACTTGATGTTTACCTTACAAATGTAGACAAGTTGCCAACTGGGATCGCCAAGCTGAAGAGGTTAAGGCACCTTCTTGCAGGAAAGTTGAGTGCTCCACTGTATTGCGGCATTGTTGAGAAGTCCAGAGGTGTTCAAGCTCCAAAGGTGGTGTGGGAGTCTATGGAGCTGCAAACTCTTAAGGGTGTTCTTGCAAACCTAAATCTTGTGGAAAATTTGGGACACATGACTCAACTGAGGACATTGGCGATCGAAGATGTCGGAGAAGAACACTATCCCAAGCTCTTTGCATCCATCAGCAAAATGCGCTCTCTACGCACACTGAAAGTTCTTTCAGCTGAAGGTAATCAAGGTCTGAACTTTGAAGCACTGAGCTTACCACCACAGAATTTACGCAAACTCCATCTTACCGGAAGGTTTCACCATACTGTGATGGAATCCAATTTCTTTCAGACAGTTGGAGCTAAACTGGAGAAGCTGTATCTCACAGGAAGTAAGACGAACATTGATCCATTGATCTCCATCTCCTGCCTCTCCAACCTGAAAGTGCTCCAGATCGGAGACGCATACGACGGAGCAAGCTTCGTCTTCCAGAGCGGATGGTTCCCCAAGCTCCACACACTCATCATGTGCAACTTGTTGCACATCAATTCGATGATCATGGAGCAGCAGACGTTGCAGAACCTCCAGTGGCTTGCACTGGTCAACTTCCCTGAGCTCAAGGAGGTGCCTCATGGCATTGAGCTTCTCTTGTCACTGCAGAATTTGATGCTGGTGAACATGCATGATGAGTTCATGGAGCGTATACAGGGTGAGGACAAGGAGAGAGTCCAGCACATCTCCACTGTCAGGTTCTTGGACAGGAGCAGAGGCATGGAGAAACGCCTGTTTCAAGAGTCATAA</cdnaseq>

Protein Sequence

<aaseq>MAEGVVFAALCKIGSVLASSASITLGGRLDANLTIINEIESRIKQIEVELKLMQAFLRQAQKQEGYSEPTEVYLQEVRKAAFEIEDIIDEFLYLSVKHKNRFFNGEFMSYFRKLGKTSWHKIARELKDSQCHLQNLRNLWVQYEIQLPNGNRVSTDVEDHRLPHHLSYPADEMVGVEQERTMMMNWLKTCSTSVITVWGMGGSGKTTLANSIYEDERIKNQFDCHIWITVSQKFNASDIMRKMVRHMLQRCSPNIDSIDGRDLVEILKRTLEHRKILLVLDDVWSTDVWMDLASTVERSNNNGNKVVITTRIKDVASLASEDQVLQLQKLNDADSWCLFCRWAFKNRIDRSCPQELESLGREIMAKCDGLPLAIVVVGNMLSFKKQDMEEWSKCNDQLTWELRDRLRDQELSSVMKILKLSYKNLPSHLKNAFVFCSIFPEDYMITKKRLVRLWVAEGLIKPEKRRTVEEVAEEYLNELIDRCLLQVVERKHFRKVKEFQMHDIVRELAISISEDETFCMTHSKSHPGEPEYRCRRLSIHEHNDRIKSVSDPSRLRSLYHFDVTCSSFPSVGTPRSARYLNVLELQDVPITVLPEELSGLFNLRYLGLRRTKIKQLPQSVDKLFNLQTLDVYLTNVDKLPTGIAKLKRLRHLLAGKLSAPLYCGIVEKSRGVQAPKVVWESMELQTLKGVLANLNLVENLGHMTQLRTLAIEDVGEEHYPKLFASISKMRSLRTLKVLSAEGNQGLNFEALSLPPQNLRKLHLTGRFHHTVMESNFFQTVGAKLEKLYLTGSKTNIDPLISISCLSNLKVLQIGDAYDGASFVFQSGWFPKLHTLIMCNLLHINSMIMEQQTLQNLQWLALVNFPELKEVPHGIELLLSLQNLMLVNMHDEFMERIQGEDKERVQHISTVRFLDRSRGMEKRLFQES</aaseq>

Gene Sequence

<dnaseqindica>1..2784#ATGGCAGAAGGCGTGGTATTCGCTGCTCTATGCAAAATTGGATCTGTCTTGGCATCATCTGCAAGCATAACATTAGGTGGACGTTTAGATGCAAACTTGACAATAATAAATGAGATTGAGAGTCGAATAAAACAGATCGAAGTTGAGCTCAAGTTGATGCAAGCATTCCTGCGCCAAGCGCAAAAACAAGAAGGCTATAGCGAGCCCACTGAAGTCTACCTGCAGGAAGTAAGAAAAGCAGCTTTTGAAATTGAGGACATCATCGATGAGTTTCTTTACCTGTCTGTTAAGCACAAGAACAGGTTTTTCAATGGGGAGTTCATGAGTTACTTCCGTAAACTCGGTAAAACTTCTTGGCACAAAATTGCTAGAGAGCTGAAGGATTCGCAATGTCACCTTCAGAATCTCCGGAATTTGTGGGTGCAGTATGAGATTCAGCTTCCAAATGGCAATAGAGTTTCAACCGATGTGGAGGATCACCGGCTTCCGCATCATCTTTCTTACCCAGCTGATGAGATGGTGGGTGTTGAACAAGAAAGAACAATGATGATGAACTGGTTAAAAACATGTTCGACATCGGTTATCACTGTCTGGGGTATGGGAGGATCTGGGAAAACCACTCTTGCCAATAGTATCTATGAAGATGAGAGAATCAAGAATCAGTTTGATTGCCATATTTGGATCACAGTGTCTCAGAAGTTCAACGCTTCTGACATCATGAGGAAGATGGTACGTCACATGTTGCAACGGTGTTCACCCAACATTGATAGCATCGATGGTAGAGACCTGGTAGAAATCCTGAAGAGAACATTAGAACATAGAAAGATTTTGCTTGTACTAGATGATGTATGGAGCACAGATGTTTGGATGGACCTGGCAAGTACAGTTGAGAGAAGCAACAACAATGGAAATAAGGTCGTAATAACGACTCGGATCAAAGATGTCGCTTCTTTGGCAAGCGAAGATCAGGTTCTTCAGCTGCAAAAGCTGAATGATGCAGATTCTTGGTGTCTCTTTTGCAGGTGGGCATTCAAGAACCGCATTGATAGATCTTGTCCTCAAGAACTAGAGTCATTGGGGAGAGAGATCATGGCCAAGTGTGATGGTTTGCCATTAGCAATTGTGGTTGTGGGTAACATGCTCTCATTCAAGAAACAAGATATGGAAGAGTGGAGCAAATGCAATGATCAGCTAACCTGGGAATTACGCGACAGATTGCGCGACCAGGAGTTGAGTTCAGTGATGAAGATTCTGAAACTGAGTTATAAGAACTTACCGAGCCACCTAAAGAATGCATTTGTGTTCTGCAGCATCTTTCCAGAGGATTACATGATAACAAAGAAAAGGCTGGTCAGACTATGGGTTGCAGAGGGCCTCATTAAGCCGGAAAAGAGAAGAACAGTAGAAGAAGTCGCCGAGGAGTACCTGAATGAGCTGATAGACCGATGCCTGCTACAGGTTGTGGAGAGGAAGCACTTCAGAAAGGTGAAGGAATTCCAGATGCATGACATTGTGAGGGAGCTGGCCATTTCCATATCAGAGGACGAGACCTTCTGCATGACACATAGTAAATCGCACCCCGGTGAACCCGAATACAGGTGCCGTCGTTTGTCGATACATGAGCACAATGACAGGATCAAGTCGGTTTCAGATCCTTCTCGACTCCGCTCGCTCTACCATTTCGATGTAACCTGTTCTTCTTTTCCATCTGTGGGTACACCAAGAAGTGCAAGGTATCTGAATGTTCTGGAGCTGCAGGATGTTCCTATCACAGTTCTGCCAGAAGAATTGTCAGGCTTATTTAACTTACGGTACCTCGGTTTGAGAAGAACAAAGATCAAGCAGTTGCCACAATCAGTCGACAAGCTGTTCAATCTCCAAACACTTGATGTTTACCTTACAAATGTAGACAAGTTGCCAACTGGGATCGCCAAGCTGAAGAGGTTAAGGCACCTTCTTGCAGGAAAGTTGAGTGCTCCACTGTATTGCGGCATTGTTGAGAAGTCCAGAGGTGTTCAAGCTCCAAAGGTGGTGTGGGAGTCTATGGAGCTGCAAACTCTTAAGGGTGTTCTTGCAAACCTAAATCTTGTGGAAAATTTGGGACACATGACTCAACTGAGGACATTGGCGATCGAAGATGTCGGAGAAGAACACTATCCCAAGCTCTTTGCATCCATCAGCAAAATGCGCTCTCTACGCACACTGAAAGTTCTTTCAGCTGAAGGTAATCAAGGTCTGAACTTTGAAGCACTGAGCTTACCACCACAGAATTTACGCAAACTCCATCTTACCGGAAGGTTTCACCATACTGTGATGGAATCCAATTTCTTTCAGACAGTTGGAGCTAAACTGGAGAAGCTGTATCTCACAGGAAGTAAGACGAACATTGATCCATTGATCTCCATCTCCTGCCTCTCCAACCTGAAAGTGCTCCAGATCGGAGACGCATACGACGGAGCAAGCTTCGTCTTCCAGAGCGGATGGTTCCCCAAGCTCCACACACTCATCATGTGCAACTTGTTGCACATCAATTCGATGATCATGGAGCAGCAGACGTTGCAGAACCTCCAGTGGCTTGCACTGGTCAACTTCCCTGAGCTCAAGGAGGTGCCTCATGGCATTGAGCTTCTCTTGTCACTGCAGAATTTGATGCTGGTGAACATGCATGATGAGTTCATGGAGCGTATACAGGGTGAGGACAAGGAGAGAGTCCAGCACATCTCCACTGTCAGGTTCTTGGACAGGAGCAGAGGCATGGAGAAACGCCTGTTTCAAGAGTCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028005