BGIOSGA028008

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Revision as of 07:51, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028008| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028008, complete gene.| tag = OJ1177_...")
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Gene Name

BGIOSGA028008

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028008, complete gene.

LocusTag

OJ1177_E11.3

Ensembl Transcript ID

BGIOSGA028008-TA

Ensembl Protein ID

BGIOSGA028008-PA

Length

5966

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3293191..3299156

Sequence Coding Region

3293191..3293565,3295201..3295563,3295841..3295919,3296181..3296587,3297050..3297205
,3297436..3297603,3297699..3297839,3298447..3298674,3298771..3298884
,3299001..3299156

Genome Context

<gbrowseImage1> name=IndicaChromosome08:3293191..3299156 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:3293191..3299156 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGCAGAGCGGCGGCGGAGGCGGAGGCGTCCACCACCACCTGAACCACCACGGCCTCTGCTGCCTCTCCGCGGCGGCGCTGCCGGCGCCGGACGCGCCGCCGACGCCGGAGCCCGAGGCGGGCGGCGCGGCGGTGGCGGTGGCCGGGGTGCTCCACAAGTGGACCAACTACGGCCGCGGGTGGCGGGAGCGGTGGTTCTCGCTCCACGACGGGGTGCTCTCCTACTCCAAGATTCGTAGGGACGCCTCCGCTGCCGCCGACGAGGATGGCGGCGGCGGCGGCGGCGGCGAGGTCAGGCTGATCGGCGGCGCCTCCGCCAGGATCGGCGGCGCGCGCCGTCCGGACAAGCCCGTCGGCGTCGTCTGCCTCAAGTTGTCAGCATTTCGGGAGAGCAAGTCGGATGATAGGAGATTCTACATATTTTCCCCCACAAAGACACTTCATTTGAAGACAGATTCAAAAGAAGACCGTGTTGCCTGGATCGAGGCCTTGATCTTGGCGAGGAGTTTTTATTCGCTAAGATCACTCAGCGGAAGGATAACTTTTGTGCAAAGCGATGTTTCGGTCTCGACTGCCAGGCTTCGGAATCGGATGCAGCAAGAGGGACTGAATGAAAGTCTTATACAAGAGTGTGAGCAGATTGTGCTTACGGAGTTCTCCAGCTTTCGCAAACAACTGAAGCTGTGCTACGAGGACCAGCTAAGCTTGTTTGGATCCTGTAGGCACCATTTTGAGGAAGGCAAAGATGCAAGTATAATACAGGGGGCGTTGACAAGAAATGACTTTTCCAGTTCTCGACATGGAAATTTTAGCGAATACAGCACTACAGAATCTGATGAATTTGAGAAGCAAGATGGTGGTGACTTGACTTGTGAAGATGAGTCTACTTTCTTTGATGCTGCAGACTACTTCATTGAACCAAACGACAGATCTTCAGCAATGTTAAGCTCAACCAGTTGTGGTGAGGGACTTTTGGATATCCAAATGGAAGATTCTAGTCACTTATTACCACAAATCAAACGGCGGAGTAAACTACCAGAGCCTACAGAGAAAGAGAGAGGCATCAGCCTTTGGTCAATTATTAAAGATAGTGTCGGCAAGGATTTGACACGAGTATGCCTTCCAGTTTACTTTAATGAACCACTCTCATCCCTCCAAAAGGGCTTTGAAGATTTAGAATATTCACACCTTTTGGATCAAGCTTATCAATACGGAAAGATGGGAAACAGTCTCATGAGAATTCTCAAAGTAGCTGCATTTGCAGTCTCTGGCTATGCTTCATCTGTCGCAAGACCTTGCAAACCATTCAACCCGCTGCTAGGAGAGACTTATGAAGCCGATTTCCCTGAAAGAGGGGTCCGTTTCTTTGCAGAAAAGGTTAGTCATCACCCCATGCTGATTGCCTGCCACTGTGAAGGCAAGGGCTGGAAATTCTGGGGCGACAGCAATCTCAAATCCAAGTTTTGGGGGCAGTCAATTCAAGTCGATCCGATTGGTGTTCTGACAGTGGAATTCGATGACGGTGAAATCTTCCAATGGAGTAAGGTGACAACAACTATTCATAATCTCATCCTTGGGAAGCTGTACTGCAGCCATCATGGAACCATGCACATAAAAGGGAATCGCCAGTATTCATGTAAACTCAAGTTCAAAGAGCCATCGCTTCTTGATCGCAATCCTCACCTGGTACAAGGCTTTGTAGAGGATGATGATGGGAACAAACCTTCGTTTTTGATAGGAAAATGGGATGAAAATATGTATTATAGTAATTTAGATACTTCCAAGGTCAAGAGCGTTGATCAATTGAAAGGTGCCGTACTTCTGTGGGAAAAGAACAAACCTTCTCCTAATCCAACGCGATACAATCTATCGTCGTTCGCTATCACATTGAACGAACTGTCTCCTGATCTTCAGGACAAACTCCCTCCTACTGATTCACGGCTAAGGCCAGACCAGCGGCATCTAGAGAACGGTGAATATGAGAAGGCAAACGCGGAGAAGCTGAGGTTGGAACGACGACAAAGAATGTCGAGTAAGCTTCAAGACAATGGCTGGAAGCCGAGATGGTTCCAGAAGGATGGCGAAGACGGGACATATCGCTTCAAAGGCGGTTACTGGGAAGCAAGGGAGCATGGACAATGGGATGACTGCCTTGACATATTTGGGGAGTTTTCAGAGACATGA</cdnaseq>

Protein Sequence

<aaseq>MTQSGGGGGGVHHHLNHHGLCCLSAAALPAPDAPPTPEPEAGGAAVAVAGVLHKWTNYGRGWRERWFSLHDGVLSYSKIRRDASAAADEDGGGGGGGEVRLIGGASARIGGARRPDKPVGVVCLKLSAFRESKSDDRRFYIFSPTKTLHLKTDSKEDRVAWIEALILARSFYSLRSLSGRITFVQSDVSVSTARLRNRMQQEGLNESLIQECEQIVLTEFSSFRKQLKLCYEDQLSLFGSCRHHFEEGKDASIIQGALTRNDFSSSRHGNFSEYSTTESDEFEKQDGGDLTCEDESTFFDAADYFIEPNDRSSAMLSSTSCGEGLLDIQMEDSSHLLPQIKRRSKLPEPTEKERGISLWSIIKDSVGKDLTRVCLPVYFNEPLSSLQKGFEDLEYSHLLDQAYQYGKMGNSLMRILKVAAFAVSGYASSVARPCKPFNPLLGETYEADFPERGVRFFAEKVSHHPMLIACHCEGKGWKFWGDSNLKSKFWGQSIQVDPIGVLTVEFDDGEIFQWSKVTTTIHNLILGKLYCSHHGTMHIKGNRQYSCKLKFKEPSLLDRNPHLVQGFVEDDDGNKPSFLIGKWDENMYYSNLDTSKVKSVDQLKGAVLLWEKNKPSPNPTRYNLSSFAITLNELSPDLQDKLPPTDSRLRPDQRHLENGEYEKANAEKLRLERRQRMSSKLQDNGWKPRWFQKDGEDGTYRFKGGYWEAREHGQWDDCLDIFGEFSET</aaseq>

Gene Sequence

<dnaseqindica>1..375#2011..2373#2651..2729#2991..3397#3860..4015#4246..4413#4509..4649#5257..5484#5581..5694#5811..5966#ATGACGCAGAGCGGCGGCGGAGGCGGAGGCGTCCACCACCACCTGAACCACCACGGCCTCTGCTGCCTCTCCGCGGCGGCGCTGCCGGCGCCGGACGCGCCGCCGACGCCGGAGCCCGAGGCGGGCGGCGCGGCGGTGGCGGTGGCCGGGGTGCTCCACAAGTGGACCAACTACGGCCGCGGGTGGCGGGAGCGGTGGTTCTCGCTCCACGACGGGGTGCTCTCCTACTCCAAGATTCGTAGGGACGCCTCCGCTGCCGCCGACGAGGATGGCGGCGGCGGCGGCGGCGGCGAGGTCAGGCTGATCGGCGGCGCCTCCGCCAGGATCGGCGGCGCGCGCCGTCCGGACAAGCCCGTCGGCGTCGTCTGCCTCAAGGTAACCCAATCCTCTCCTGCGATCTCGCAGATCATGTTTTTTTTTTTTTTTGCCCCAACATTTCTCGGTTTGCGAATCTGTGTCTGCGAGGAATTTTCTCTTTCTTCCTCTTTCCGAATCTGAATCGATCAAGCATCAATCACATTTTGCATTGTGTTAGTGTGTGAATTGTTCCTTCGTTTGCGTTGGCGAAAGAGACTGGAAGATTCTCTGTCGAAATCTCGTTACTATGCAATGGTTAGTTGGGAGATTGCGTCACATTTTGCTGGATCGAAATGACGTGATGTTCTTTTGTCCTCACGAATTCTTGAAGTTTTTTTTCCCTTTTTTGTTTGTCATTTGGACGATTATTTTGTTCAACATGATCTTGGTGTGTGTTCTTGGAATGGAACAAAATTTCCGAATTAATTTCTGCTTTGTTCATGACATGAATGGGGGGGGGGGGGCATATTGGAGCAGTTAAACACCTGAGGTTTTGATTGACCAATCATCTCATTCGTGGTCCAATGCCACAGAACAATGCCTAAATTTAGCAGTATCAGGTTAAGGTACAAATGAACAAAAATGATTCCTATTTTTCTCTTCCTGATACGAGATTTCCCAAAAAAAAAAAAAGGGCCGCACCTTTCTCTATCACACAACCAGACACATCTTTTGCACAAAAATCCCTCAACTTTTAGTGGATTTAGCCAAAATTTCAAGCTCTCCTGTAGAATTTCTTACAAATGGCAGGGTTCTGTGGCAACTCTAAAGAACGATGAAGACAGTGAAGTTTATCCGTCCCTCGCTGTCGTATTAAAAAAATGTAGATGATATAATTAATTCCAACTGTGACACAATTAATCCTTAATGAAGCATGGTTAATACTGTGCATTAAGTTGAACAAATCCGGGTGGTTACAGAATATGCTCAGCGAATGTTTTTTTTTTAATTTTTGAATTTTATTGCATTATTGATTTGTACTGCTCCAGAGGGAGAGGGTTGCTTTTCCACAAGTCTTTTACTAGCTGTTGAACTCGCAGTAGTCGTACTAGCACTGAGTCTTTTCAAGGCCATTGCTCATGGGTCCCCAACAATTAAAGGATGTACAATTGCTTTGCTTCCAGTGGTCACATATACTAGAGCAAGATAGTAAGGGGGTTAGGGGTTGAAATAGAGGACCTGTGTGTAAGTTAGAGTGAATCAGGAGGGGCCTTGTGGATCTCCAAGAACTGCTCTACTTGCCCACTTCACTTGCTTGGTCCAAGGTAGTGGTCACCATCTTGATTGTATTTTCTTGGTTTTCTTGAAATCTTTGTTGTCGTTGTTTTTTCTCTCCATATTTTGATGTTAGATGTGATGTACCTTTTGCTTGCCTTTTCCCCCTCACCCTTTAATTAAAGTTGAAGGGAGTGGAAGTGATTCACATGCCTTTCTTCCTGGAATGCCAAACTAATGGTCTTTGGATCTTTATTTTTATTTGTCTTGGTCTGCAATAAGCATTTAGCTTGACTGTTGATTAACACGATGGATGGTAGTCTGCGTGTGTGTGCTCTATTTTATTTCTGATGGATAGCGTTACATGTTGGAAAGTTCACTCTGCATTTTCATGTGCAAGGTCTCCCATAGCAAAGCTAACTGGACATTATGTTGTAGTTGTCAGCATTTCGGGAGAGCAAGTCGGATGATAGGAGATTCTACATATTTTCCCCCACAAAGACACTTCATTTGAAGACAGATTCAAAAGAAGACCGTGTTGCCTGGATCGAGGCCTTGATCTTGGCGAGGAGTTTTTATTCGCTAAGATCACTCAGCGGAAGGATAACTTTTGTGCAAAGCGATGTTTCGGTCTCGACTGCCAGGCTTCGGAATCGGATGCAGCAAGAGGGACTGAATGAAAGTCTTATACAAGAGTGTGAGCAGATTGTGCTTACGGAGTTCTCCAGCTTTCGCAAACAACTGAAGCTGTGCTACGAGGACCAGCTAAGCTTGTTTGGATCCTGTAGGCACCATTTTGAGGTAAGGAACTGCATGCGTTAATTATTGGATGCCCTATTTTTAGGACCAGTGCAAACCTTCACATGCCTAACTTGGAATGGAATCGGCAGCTAACAAAAACCTCTTATGCCCGTGGAAATTTATCTTGATATTCTTATTAGTTCTTAAAATGCTGCTGATCAATACATAGATCTTCTTTGGGACTTGTTTTCTAACTCTGCAAAGTTACTCTCCTTGAAAGGTTACTCTGCTCTCTTTTCCTGCAGGAATTTTACGTATTACACACATATTTGTGCAGGAAGGCAAAGATGCAAGTATAATACAGGGGGCGTTGACAAGAAATGACTTTTCCAGTTCTCGACATGGAAATTTTAGCGGTATGTTTTCATAGAACGTACTGAGCTATTTCTGCACATGATTAGCTGCACAGATAGTCTTCTGGCGATTTTATCCTTCTTCACGCCACTCCATCGGGCATTTTTGAATGTTTATGATTCATTTAGTTGCCTGAGTATACTAGTTCTGCCTTGTATTAGAAGGAAAAACCTGATGTTGTTTACTAGTCAGTGGCTATAACTTTCATTCATTAAATTGACATTAGCATTTGTTAATGTTGTAGTTGTTTGCTTGTCATGCAGAATACAGCACTACAGAATCTGATGAATTTGAGAAGCAAGATGGTGGTGACTTGACTTGTGAAGATGAGTCTACTTTCTTTGATGCTGCAGACTACTTCATTGAACCAAACGACAGATCTTCAGCAATGTTAAGCTCAACCAGTTGTGGTGAGGGACTTTTGGATATCCAAATGGAAGATTCTAGTCACTTATTACCACAAATCAAACGGCGGAGTAAACTACCAGAGCCTACAGAGAAAGAGAGAGGCATCAGCCTTTGGTCAATTATTAAAGATAGTGTCGGCAAGGATTTGACACGAGTATGCCTTCCAGTTTACTTTAATGAACCACTCTCATCCCTCCAAAAGGGCTTTGAAGATTTAGAATATTCACACCTTTTGGATCAAGCTTATCAATACGGAAAGATGGTAAGATCATTTTACATATGTGGTTCTGTATTTCTACGTTTCCAGGATATTTGCTTGTTTTATGATGAGAGTATAGAGATCATTTACAATAATATTAGACTTCAGCTCAATGTCAATCCCTAGACGTGATCATGAAGAAAACAAAAACAAGCGCATTACGTCTGTAGTTTGCAGATTTGTGTTGAGATCAATCATTCTGTGCTACAAAAATGATCTCTGCTATACAATGTTAGTCTTGCTGAAGCGACAAAACTCTTTAAGAAGTGTGGTGCTTTAATAATTTTACACATAAAAGACTTTTGTTGATTGTTCATATTGTAGTTTCGATCAGCTGGTTTGGTGTAGGTATGAAAATAGTCATAGTTGAGTTCGGAAATTATTTTAACTCTATGTATCAACTGGCATGTCTCTCTATTATAACGAGTTCTTTTTTTTCACGTGTCTGTTAAATCTAAAATTTAGGGAAACAGTCTCATGAGAATTCTCAAAGTAGCTGCATTTGCAGTCTCTGGCTATGCTTCATCTGTCGCAAGACCTTGCAAACCATTCAACCCGCTGCTAGGAGAGACTTATGAAGCCGATTTCCCTGAAAGAGGGGTCCGTTTCTTTGCAGAAAAGGTTGGTTATCTAACTCTTTATTGTATTTTTCTGTGCAAAGGAAATATTTTATCTTCCATTTCAATTTTATGTGAAGGATATAATGCAAAACTGATATCTACTGAAAATTAATGTAAGTTCCACAAGGCATGACACTTGCCTCCTTTTCTATCTGTGAACTAAAATTTAATATCTTGATAGTGTGAAGCATTTAATTGCAACACATTGCTTTTCGTCATTTTCATCACTAGGTTAGTCATCACCCCATGCTGATTGCCTGCCACTGTGAAGGCAAGGGCTGGAAATTCTGGGGCGACAGCAATCTCAAATCCAAGTTTTGGGGGCAGTCAATTCAAGTCGATCCGATTGGTGTTCTGACAGTGGAATTCGATGACGGTGAAATCTTCCAATGGAGTAAGGTCTGTAGGATGATACCTGAACGGAATCTATGATTTTTATGTTCTTCATAACAAAGTTGTGTATGTCTCATGCTAAAGTGCTAGTGCCATTTTAGGTGACAACAACTATTCATAATCTCATCCTTGGGAAGCTGTACTGCAGCCATCATGGAACCATGCACATAAAAGGGAATCGCCAGTATTCATGTAAACTCAAGTTCAAAGAGCCATCGCTTCTTGATCGCAATCCTCACCTGGTATGTTTTGTTTCACCTCCTTTTTTCCTTGTCATCCTTAACTGTCATTTTTATTACTGTTAGCCTGATATGTGGAGAAAACCATGTTTTCTGTGTACAGTACCTTCTGACTAATCTGTATATTACGCTTATTTCCTTGTCAAACATTGCATGTGTGGAGTGTGGACAACGGGTCACTTATAACATGAAGAGCTGAGTGGTCTCCTTCAATCGTACCATCTGATACATTAATTGCACAAGCATGTTCTTATTTTAATGCGTTATAGTAGTATAAATTTAAACCACAAACTCAATGCAAGGTTGCAAGTTCCTACTCTGAGCTGCCCATCGGTGCTGTTAGAATTATCAGTCCATTGATTGTATATGGATTTGATGAAACTAGTCCATTTTCATGCTGATATGGTAGTAGCATGAAATGCCCTTGCAATGAGAGTAGTGATTTTTCCATGCGAAAATTCCCTATGTTGTGGAAATTTATTTGGCCCTTTTTTCCATGTAGTTCATTCTGAATGCTACTGTAAGAAACTATGCACTGTTTTTACTTGTGAACACAAGTGTTTCTGGTGGATATATCTTCATACCGTGCTTACACTTTTTATGTCCACAGGTACAAGGCTTTGTAGAGGATGATGATGGGAACAAACCTTCGTTTTTGATAGGAAAATGGGATGAAAATATGTATTATAGTAATTTAGATACTTCCAAGGTCAAGAGCGTTGATCAATTGAAAGGTGCCGTACTTCTGTGGGAAAAGAACAAACCTTCTCCTAATCCAACGCGATACAATCTATCGTCGTTCGCTATCACATTGAACGAACTGTCTCCTGATCTTCAGGTATGTGTGTAGTCATGAATACTCCACAAGCTTTGAATTGTTTACTTGATATCAAGACTCAATGATCCTAATTGAATTGATTGGTCATGTTCAAAGGACAAACTCCCTCCTACTGATTCACGGCTAAGGCCAGACCAGCGGCATCTAGAGAACGGTGAATATGAGAAGGCAAACGCGGAGAAGCTGAGGTTGGAACGACGACAAAGAATGGTATGTTCTCTCTCTCTCTCTCTCTGTGAAAAGAACTCTTTAAGATGAACATAGATTTAGCTTGTAGAAACCATCACGCAGTTGCTGCATTTTGATTGTAATCTGCTTTGTCGCAGTCGAGTAAGCTTCAAGACAATGGCTGGAAGCCGAGATGGTTCCAGAAGGATGGCGAAGACGGGACATATCGCTTCAAAGGCGGTTACTGGGAAGCAAGGGAGCATGGACAATGGGATGACTGCCTTGACATATTTGGGGAGTTTTCAGAGACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028008