BGIOSGA028009

From RiceWiki
Revision as of 07:51, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028009| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028009, complete gene.| tag = OJ1177_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028009

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028009, complete gene.

LocusTag

OJ1177_E11.5

Ensembl Transcript ID

BGIOSGA028009-TA

Ensembl Protein ID

BGIOSGA028009-PA

Length

3223

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3306959..3310181

Sequence Coding Region

3306959..3307007,3307756..3307826,3307921..3308002,3308117..3308232,3308332..3308493
,3308598..3308642,3309537..3309614,3310071..3310181

Genome Context

<gbrowseImage1> name=IndicaChromosome08:3306959..3310181 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:3306959..3310181 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCGCGAGTTTCCTCGAGATCCAGCCTTCGGAGCTCTCATTCCCCTTTGAACTACTGAAGCAGAGCTCATGCTCCATGCAACTCACCAATAAGACCGACCATTATGTTGCATTTAAGGTCAAAACAACCAACCCAAAGCAATACTGTGTGCGCCCTAATATTGGCGTCGTATTGCCGGGGTCTACATGTGATGTTACAGTGACGATGCAAGCACAGAGGGAGGCACCTCCGGATATGCAGTGCAAGGATAAGTTCCTTGTTCAAAGTGTTGCAGCTGAGAATGGTGCAACAACTCAAGATATTAGTGCAGAAATGTTCAATAAGGTGGCAGGAAAGGTTGTTGAGGAATTCAAGCTACGTGTAGTCTATGTGCCAACGACTACATCCTCCGCAATGCCTGAAGACTCTGAACAAGGAAGTTCTGCTCGGCCATTTGCACAAGAAAATGGTATCCATAATTCAACAATGCCACAACCTGTTTTTAGATCATCTGCTGAACCAACAAAGGAGAGGCCCACAGAGCCATCGTCCATGATCTCCAAACTAAATGAGGAGAATAGGGTTGCTATTCAGCAAAACCAGAAGTTACGACATGAGCTGGAGCTCCTACGGAAAGAAAGCAGCAAAAGCAGTGGCGGTTTCTCCCTCACCTTCTTGGCCATCGTCGGTCTTCTCGGCATCATCGTGGGCTACATCCTCAAGAAGACATAG</cdnaseq>

Protein Sequence

<aaseq>MSASFLEIQPSELSFPFELLKQSSCSMQLTNKTDHYVAFKVKTTNPKQYCVRPNIGVVLPGSTCDVTVTMQAQREAPPDMQCKDKFLVQSVAAENGATTQDISAEMFNKVAGKVVEEFKLRVVYVPTTTSSAMPEDSEQGSSARPFAQENGIHNSTMPQPVFRSSAEPTKERPTEPSSMISKLNEENRVAIQQNQKLRHELELLRKESSKSSGGFSLTFLAIVGLLGIIVGYILKKT</aaseq>

Gene Sequence

<dnaseqindica>1..49#798..868#963..1044#1159..1274#1374..1535#1640..1684#2579..2656#3113..3223#ATGAGCGCGAGTTTCCTCGAGATCCAGCCTTCGGAGCTCTCATTCCCCTGTAAGTTTTTGGCCCAGATCTCGCCTCCTTCCCCTCCCCCTGCTCGAATTGATCGATGTGAGTCGTTGATGGATCTTGGTCAAAGCTTTGGATCTTGGGGGTGGAAGAGAGGCTGTTTGCTCTCTGTTTGATCCGTGTCAGCTTGAGATTCGTCGAGTGCTGTGGTCGATTCGGCCATTGGATCGTGGAAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGTGTGTGTGTGTGTGTGTGATTCTTGTGGTGGTTGCTCTTGCTGCTACTGCATGTGTGTCTGCCTTGTTTGTTTTGCTGGGATTTGTGTGAGCTAGGTCTCGTGTGGTTGGTTGATGAATCGATACGGGGACTAAATTTGGTGATGGCCTGCTTCGCATTTGCGTAGAATCATCGTTTGGTAGCTGTCTGTACTTCCAGGAGTTTTGGGATCTTGTCAGCTAGTATGTGCCTTTTGACCATGCTGATCTGCTCCTGATTTGTCGGGAAGCTCGAATGCAATGTCCATGCAATTCTTCATGGTTATTGGGATTTGATTCGATGGCAGTTATAAGTCTTAGATTGATATAGCATGCTTAGTATGTTGATTTTTTTTTCATTTTTTTACTTAAGTTTGTTGCTTCTTTTTTCATTTTGTCCTAAAATGATAGAGTATGTCTTTGTAGGAATGTCCGGTGGGTTCTATTGTGTTTTTTTTTTTTTTGCTTCAGATATTCTCTTGAAACTAATTTACTGTTTCGTATATGCAGTTGAACTACTGAAGCAGAGCTCATGCTCCATGCAACTCACCAATAAGACCGACCATTATGTTGCATTTAAGGTAATCTACTTGAGATGTCACCTCTCACACGTTTCTAGTTGTCACCATTCATTTCTGAATGATTTAAATCTGTTACCTCATCCATGGCTGGCAGGTCAAAACAACCAACCCAAAGCAATACTGTGTGCGCCCTAATATTGGCGTCGTATTGCCGGGGTCTACATGTGATGTTACAGGTAGCTGCCACTCCATTACATAGTGAAACTATAGGATAATACCAGTACAAGTCTGTTTAAGATAGATAGCTCAGATATCTATTTAGAAGTCTGCTTAACATTTGGTTTTATTAGTGACGATGCAAGCACAGAGGGAGGCACCTCCGGATATGCAGTGCAAGGATAAGTTCCTTGTTCAAAGTGTTGCAGCTGAGAATGGTGCAACAACTCAAGATATTAGTGCAGAAATGGTAACTACTTTGCAGCTCTTCATTTTGTGTTGTTTCAATCAATTTGCTATATGCATCTGTTACAACATCTCATCCCTTATGTTTTTATTATGATAACAGTTCAATAAGGTGGCAGGAAAGGTTGTTGAGGAATTCAAGCTACGTGTAGTCTATGTGCCAACGACTACATCCTCCGCAATGCCTGAAGACTCTGAACAAGGAAGTTCTGCTCGGCCATTTGCACAAGAAAATGGTATCCATAATTCAACAATGCCACAACCTGTAAGTCGATCATGTTTCCTCATTTCTTTATTTTGTGCTCTTGTTTGTAATCAGACTTCGGAGGATCTATTTTTTAATTATTTGTACCGATGTGCAACATTTAGGTTTTTAGATCATCTGCTGAACCAACAAAGGAGAGGCCCACAGAGGTAGTCTTTTTATCTTACTTTTGTAGTTAGATATTTAATTGAAGAATCAGTATTATTATAGAAAAGTATTGCAACTTTCTAGATGAACTAAGTGTCAAATAATAATGTTGGAATTATGTGATGTGCCCTTGTTCTTTTCGACTTTACTTATTGTGCTCAAGTAACTAATAATGCACAGCTTATGATAACAAAGTTAAGTAAAACTGGAGATAATTGCAGAGCATAAGCCCAGGCATCCTGGATCTGAGTATATGCTGTAGTTGAATTGCAAGTGATCATGAATCCTGACTGCCGCGCAGCATGACATTTTAGTGTTTAGTATGCTTTCATGAGACCAAAATTATAGCTTTTGTTTGCTTTCCCAGCATGCCCCTCTTTAAAATTGAATTGATGAGCACAATTACAACATATATGTGGAGATGCGACATGTACTTATAAGTAATTCATGGATGGCATGTCACCACATATATGTTTATTATCTCACTGAATTGATTTATGCAAAATATCTGATTACTTGCTAATATCTAATCTGAAAGCTAGAATCAACTTAGCTTTAAATTCAGTACTACACAAGTCAATATTTTCTTTTGGAAAACCGGGGCGCCTTGGTTGTTTATGATTCATATGAACTTGTCTATTTGCTGCAAGCTTTTCCTTGCTTTAGCCATGAATGACAGAGTGCATCCAATGAGTGATGAGCTTGGCACACAGGAAAATATAGGTCATGATAGTAATCAGGCATTTTACGTACCGTATGAGATAATTCAGTGATAATAGAAAAGCCAAAATACAGGAACAGGAGCTACATTTAGTTGTTAGCATGTCTTTATATTCCAAAATGCTTTTAAGATTTCTTTTGATAAATCACTTGTTGATGATTTATATTCTTATCAGCCATCGTCCATGATCTCCAAACTAAATGAGGAGAATAGGGTTGCTATTCAGCAAAACCAGAAGTTACGACATGAGCTGGTAAGTACTTCAACCATTATGAAACAGCACTAGTCGTACCATCATTCAAAGGAAATAAATAATTGCGATCACAAGAACTGATGGTTGACATTGCTAAAAGGCATATCAAGAAGTTGCTGCTTTCTTCGTACAACTGGACTTCTACTTTTTTTTTTATGGACTGTGAATTTCAAATTTGTGACCCATTGGCCATTGTTTTTTTGTTCTGCTTAATTCAATTAAACCAATCATATCAACTGTCATGTGATGACTAGAATCTGGTGACTAAGTTCTCACTGACAAATCCAGATTTGTCGATTTGGAGACAAAACAAACATGCGCAATACAAATCCGGCTGCTAAATTCTGCACTTGCTCAATGCTGCATTTTATCTATAGCTTGCACACGCCTGTGAATTTAATGGATTCTACGAACTGAACATTGTGTTGATGAAATCTCTATTTATCTTTCAATCAGGAGCTCCTACGGAAAGAAAGCAGCAAAAGCAGTGGCGGTTTCTCCCTCACCTTCTTGGCCATCGTCGGTCTTCTCGGCATCATCGTGGGCTACATCCTCAAGAAGACATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028009

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA028009&oldid=34266"