BGIOSGA028021

From RiceWiki
Revision as of 07:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028021| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028021, complete gene.| tag = P0498E1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028021

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028021, complete gene.

LocusTag

P0498E12.110

Ensembl Transcript ID

BGIOSGA028021-TA

Ensembl Protein ID

BGIOSGA028021-PA

Length

3720

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3691902..3695621

Sequence Coding Region

3691902..3692035,3692129..3692375,3693481..3693630,3694044..3694101,3694181..3694273
,3694400..3694432,3694983..3695074,3695170..3695229,3695355..3695621

Genome Context

<gbrowseImage1> name=IndicaChromosome08:3691902..3695621 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:3691902..3695621 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGCTCCTCCGGCGATCCGCCGGCCCCGCGCGCCAGCTCCTCCTCCGCCCGCGCCCGCTCCCGCTCCCCCACGCCGCCTCCTCCACTCGCTCCTTCTCCCGCTACTACTCCCGCGACGACGTCTCGAGGTACGAGGCGCTGAGCACGCCGGTGAACTGGGGGGTGAGCATCGTGCCGGAGAAGAAGGCGTTCGTGGTGGAGCGGTTCGGCAAGTACGTCAAGACGCTCGGCTCCGGGATCCACGTGCTCGTCCCCCTCGTCGACCGCATCGCCTACGTCCACTCGCTCAAGGAGGAGGCCATCCCCATCCCCGACCAGTCCGCCATCACCAAGGACAACGTCTCCATCCAGATCGACGGCGTCCTCTACGTCAAGATTGTTGATCCCTACCTTGCTTCCTATGGTGTGGAGAATCCAATTTTTGCAGTCATACAGCTTGCCCAAACAACTATGAGAAGTGAGCTTGGAAAGATTACCCTAGACAAGACTTTTGAGGAGAGGGATACACTAAATGAGCAAATTGTGAGGTCCATTAATGAGGCTGCAACTGATTGGGGACTGAAATGCCTACGTTATGAGATCAGGGATATATCTCCGCCACGTGGTGTTAAGGTGGCTATGGAGATGCAAGCAGAAGCAGAAAGGAAAAAGCGTGCCCAAATCCTTGAATCAGAAGGTGCTATGTTGGATCAGGCAAATCGCGCAAAGGGTGAGGCTGAAGCAATTCTTGCAAAGTCTGAAGCAACTGCTCGAGGAATCAGATTGGTCTCTGAGGCCATGAGGACCAAGGGCAGCACTGAGGCTGCGAACCTGAGAGTTGCTGAACAATACATGAAGGCATTTGCTAATCTGGCCAAAAAGAGCAACACGATTCTCCTTCCAAGTGACGCTGGCAACCCATCATCCCTCATCGCCCAGTCTCTCCAGATATACAAGCACATCTGCCAGACCAACAGCTTGAAGAGTGGGAAGTACCTCACAGATGCTCCAGAGGAGACAGAACTGGAGGAAGAAGAGTTGGACTCTACCGACCTACCTTCTCTGAGCAGCGGGATGCCGTCCCCCGACATGCCAGATGACCATGACAAGACTTTCTCCCTGCAGCGCCGCAACAAGGACAAGCACTGA</cdnaseq>

Protein Sequence

<aaseq>MATLLRRSAGPARQLLLRPRPLPLPHAASSTRSFSRYYSRDDVSRYEALSTPVNWGVSIVPEKKAFVVERFGKYVKTLGSGIHVLVPLVDRIAYVHSLKEEAIPIPDQSAITKDNVSIQIDGVLYVKIVDPYLASYGVENPIFAVIQLAQTTMRSELGKITLDKTFEERDTLNEQIVRSINEAATDWGLKCLRYEIRDISPPRGVKVAMEMQAEAERKKRAQILESEGAMLDQANRAKGEAEAILAKSEATARGIRLVSEAMRTKGSTEAANLRVAEQYMKAFANLAKKSNTILLPSDAGNPSSLIAQSLQIYKHICQTNSLKSGKYLTDAPEETELEEEELDSTDLPSLSSGMPSPDMPDDHDKTFSLQRRNKDKH</aaseq>

Gene Sequence

<dnaseqindica>1..134#228..474#1580..1729#2143..2200#2280..2372#2499..2531#3082..3173#3269..3328#3454..3720#ATGGCGACGCTCCTCCGGCGATCCGCCGGCCCCGCGCGCCAGCTCCTCCTCCGCCCGCGCCCGCTCCCGCTCCCCCACGCCGCCTCCTCCACTCGCTCCTTCTCCCGCTACTACTCCCGCGACGACGTCTCGAGGTCAGCGCCCAACTCCTCCTCCTCCTCCTCCTTTTTTTGGTTTTGGTTTTGGTTTTGGAAGGGTGGTTGATGTGTGGTGGTGGTGGTGTGCAGGTACGAGGCGCTGAGCACGCCGGTGAACTGGGGGGTGAGCATCGTGCCGGAGAAGAAGGCGTTCGTGGTGGAGCGGTTCGGCAAGTACGTCAAGACGCTCGGCTCCGGGATCCACGTGCTCGTCCCCCTCGTCGACCGCATCGCCTACGTCCACTCGCTCAAGGAGGAGGCCATCCCCATCCCCGACCAGTCCGCCATCACCAAGGACAACGTCTCCATCCAGATCGACGGCGTCCTCTACGTCAAGGTTATATCTCTTTCTCTCCTCGCCTTAAGCTGTTTCTGCTCTGCTGCATTTCCGATTGCTGCTGGTGGTGGTGGATGCAACAAGTTGTGTTGTGCGCTATCGAGCTTGCAATTTTGGTCAGTGTGGTGTTTGGGTTTCAGGATTTCTGAATTTTAGATGGTCGGGTTGGGTGCTCTAGGTGAGGGCGATGATTATGCTGCATTGCAAGGGTTTTTTTGGTGCAGAGTCTCTTCTCTGTTGTAGGAGATTGTTCGCTTGCTGCATTGTTAGATGCAATTCGTTGTGGCGAGGGTTTTGTATGGGGGATCAAGCTTGCAACAATTTGGCTAGTGTGGTGTGGGTTGAATTATGCTAAGGATTTCTGAATTTTGATGGTCAGGTTTTGTGTTCTAGGTGAGAGTGGAGGATTGTGATGCACTGCAGGATTTTTTTTTCTTGTGATGCGGAGGCTCCCTTCCTTGTTCTAGAAGATGCTATGCTTGTGCTTATTCGGGATTGGCAAAATGTGTGGACAATCTGAGTTTAGATGGGTGCGGTTCCACGGCAGATGCTATTCTGATGGTTTAGTGATATATAGGTGGGAAAAATTAAATTGATAGGAGTTTTGTGAGCATGGACATGTATGCTTATTTCCTTGCCATGTAATATGTGTGGGACGCTCCTGGTTGCTGTTGTTGTATTAAGACGCTGTTCTAATACTGCTAGGTTGGTGGTTTGGTTTATATCTGATTTTGTTTGGCTATACAAGCTAACAAGTTTTTTTTTTCTGCATCCATAACAACTCTGTAGCTTGGTTGATCATAAAGTTGTCTGTAGCTAGGTTATTTATATCCATGTTGATCATCCTGCCCTTAATGAATATGACTAGCATTGTTGGGCATGTAAATCTCACATTGGATAACTAACTTATTTATGCAAATGCTCCAAATGGTAAATGTCAAAACATTTAGCATTGTATCTAAGATATATATATCAAGTGACTGCTTTGTGATAATGCACCCAATCAAGGGATTTCCATAAATATAGAGTCAGCTTTCTAGAAGGTATATGCTGTTGCTTGCAAGTGCTAACTATTACTTCTCTTTGGTGATTGTGAACTTTGCAGATTGTTGATCCCTACCTTGCTTCCTATGGTGTGGAGAATCCAATTTTTGCAGTCATACAGCTTGCCCAAACAACTATGAGAAGTGAGCTTGGAAAGATTACCCTAGACAAGACTTTTGAGGAGAGGGATACACTAAATGAGCAAATTGTGGTATGGAATCTTGTTCACACTATACATTGTTTGTTCTACTAGAATCTGGGTTTAGTACTTAAATATGCAATGAGCTCTGTCCATATGTTAAACTTCCATCTCTTATAACGATTCATTTTACTTTATAATTGCATTGTTTTGTGGATCATCATTGCCGAATGTAAGCAAAAAAACTGCAGTTCCTATGGTCGTCTCTCTCAGTCTCTCCATTATTGTTTTGTTAGGCTTTCCAATTTATGGCTCCCATTAAGCAACACCGCCGTCCGCCGTACAGATTTTTTATCAGTAATTTATAACAGTGACTGTTGTAGCATGATAATTTTGTATTGTCTGTACTCTATATCATGCTTTTCATCATTCTTGTCAGTTTTATGCATTGCTTTTGATGTATTTTTTCTGTATTTATCTGGCAGAGGTCCATTAATGAGGCTGCAACTGATTGGGGACTGAAATGCCTACGTTATGAGATCAGTATGCCTTTTTGCTTCTGAATTGTTGAGCTATAACTGTTTCCTGTAACATTTCTGATGTTTAATAATTGACTATGCAGGGGATATATCTCCGCCACGTGGTGTTAAGGTGGCTATGGAGATGCAAGCAGAAGCAGAAAGGAAAAAGCGTGCCCAAATCCTTGAATCAGAAGGTGATGAATGCACGGTCTCTTTTAAGTTTTTAACATGATTTATCTTAGCCTGCTTGAAAGGGCATTATTGGATTGTAGTATGTAGAAAATGAAATTCTGATTGACATATTTCATTTGATCTTCCAGGTGCTATGTTGGATCAGGCAAATCGCGCAAAGGGTATGTTTTATATGTTCATTCTAAATCTTTCTGTTTTCCATGTTCTCCATGATAAGATGGCCTATAAATATGTTCAGCATGCTTCCTTCTGTTTGTTTCATTTATCATGCCATCATGTTTCCTAGCTTTTGAGCATCACACTGTCCATATTATCTGTCATAACCTGGTATGTATAGTTTTTTTGAGTGTCGTTCTGTATGTCCATTTTTTCTGCCATCATCTTTATTGCCTTTTAGCTTTCCCATTTTCCATGTTATCTCATTATACAAGGGGCCATGTGTATTTTTGTTCAGCATCCATTCATCTGTTTGTTCCATTTATTATACTATCATCCTTCTCGTTTTTTGAAATGCTTATGTTCAGCCTGTGTCTTTTGGTTGTTCCATTAGTTTACTATCATCTTGACCACTTATGGAGATTGGATCATTGCAATATACCATATTTTGGTTTGATTACCCTGAAACATTTTGTTTGTGTTTTTTTTGTCCTGATGAGAATTAATGGATTATCTACGCATTGATGCTAATACAATCTTATGTAATGATACCAGGTGAGGCTGAAGCAATTCTTGCAAAGTCTGAAGCAACTGCTCGAGGAATCAGATTGGTCTCTGAGGCCATGAGGACCAAGGGCAGCACTGAGGTATCATGATCTGTTGAGACGGTTTAATAGCGTCTACTTTTGTGCTAAGTTCTGTATCAAACCTGTGCTCATATTCATTCTCTCACTTGTTTTAGGCTGCGAACCTGAGAGTTGCTGAACAATACATGAAGGCATTTGCTAATCTGGCCAAAAAGGTGAGATTCCTGAAGCTATGTTTCCATATTCCACAGTTACTAATGTGATTTGCAAAGTATTCTATCTACAGTTCCTAATGTGATTTGCAAAGTACTGATGCATCGCCGATCTCTTTGAAACACAGAGCAACACGATTCTCCTTCCAAGTGACGCTGGCAACCCATCATCCCTCATCGCCCAGTCTCTCCAGATATACAAGCACATCTGCCAGACCAACAGCTTGAAGAGTGGGAAGTACCTCACAGATGCTCCAGAGGAGACAGAACTGGAGGAAGAAGAGTTGGACTCTACCGACCTACCTTCTCTGAGCAGCGGGATGCCGTCCCCCGACATGCCAGATGACCATGACAAGACTTTCTCCCTGCAGCGCCGCAACAAGGACAAGCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028021

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA028021&oldid=34278"