BGIOSGA028027

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Revision as of 07:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028027| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028027, complete gene.| tag = P0672D0...")
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Gene Name

BGIOSGA028027

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028027, complete gene.

LocusTag

P0672D01.118

Ensembl Transcript ID

BGIOSGA028027-TA

Ensembl Protein ID

BGIOSGA028027-PA

Length

3550

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3811297..3814846

Sequence Coding Region

3811297..3811852,3812048..3812124,3813089..3813134,3813394..3813526,3814541..3814595
,3814721..3814846

Genome Context

<gbrowseImage1> name=IndicaChromosome08:3811297..3814846 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:3811297..3814846 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTCTTCCCTTCGCAGCCGGATCTTTCCCTCCAGATCGGCCTCCCCACCGGCGCAGCCGCGGCGGCGCATGGCCACGGCCTCAACGCGAGGTTCTTTGCCGCCGCCGCGGGAGCGGGTGGCCACAACCCGGCAATGGCGTCGTCGCCGCCGTCGTCGCTGCAGCTTCCGCTTCCCATGCCGCTGCCGCTGCCGCTGCCGCTGCCCATGGCTCCAGCCGGCGCCGGCGGCCTGCAGTTCTACCCCGACGCCGCCGCCGCCATGCTGAGGCCCATACGCGGCGTGCCGCTGTACCACCACCACCAGCAGCAGCACGCCGCGGCGGCGCCGTTCGTGGGCGCGGCGCCGCTGCCGCACCACCCGAGCTCAGGCGGCGCGTGCTACTGCGAGCCGTGCCACGTCGCCGGCGCGTGGCGCAGGGGTGGCTGCGGCGGCGGCGGCGCCCGCGGCGTGCTCCCGGCGAAGCGCGCCCCGCGCGCGCCGCGCATGCGCTGGACGTCCACCCTCCACGCCCGCTTCGTCCACGCCGTCGAGCTCCTCGGCGGCCATGACAGGGCAACGCCAAAGTCGGTTCTTGAGCTGATGGATGTGAAGGACCTCACCCTGGCTCATGTCAAGTCTCACTTGCAGATGTACAGGACAGTGAAGAATACCGAAAGGCCGGCAGCTTCGTCAGATCAAGCTGATGGGTTTGAGAATGGGTCGGCCGGCGAGATCTGCGACGAGAACTCGCTCGACCTGCACGGCGGATGCAGGCCGGAGGCGATGTCGGCGGCGGCGACTGCGGCGGCGGCGGCGCGACATGGAAGGGAGGACTGGTCTGGCTTCCATGAGTCCAACACTGGAACCATGCAAACTCTGAAGGATATGCAATCCAAGAGCCTAGAGATCTTATCAGACATGAACTCCTGCGTTTCGGAGACGACATCGAGCACCAGCGAGCTGAACCTCGAGTTCACGCTAGGGCGACCACAAAACCGACCAAACTAA</cdnaseq>

Protein Sequence

<aaseq>MELFPSQPDLSLQIGLPTGAAAAAHGHGLNARFFAAAAGAGGHNPAMASSPPSSLQLPLPMPLPLPLPLPMAPAGAGGLQFYPDAAAAMLRPIRGVPLYHHHQQQHAAAAPFVGAAPLPHHPSSGGACYCEPCHVAGAWRRGGCGGGGARGVLPAKRAPRAPRMRWTSTLHARFVHAVELLGGHDRATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTERPAASSDQADGFENGSAGEICDENSLDLHGGCRPEAMSAAATAAAAARHGREDWSGFHESNTGTMQTLKDMQSKSLEILSDMNSCVSETTSSTSELNLEFTLGRPQNRPN</aaseq>

Gene Sequence

<dnaseqindica>1..556#752..828#1793..1838#2098..2230#3245..3299#3425..3550#ATGGAGCTCTTCCCTTCGCAGCCGGATCTTTCCCTCCAGATCGGCCTCCCCACCGGCGCAGCCGCGGCGGCGCATGGCCACGGCCTCAACGCGAGGTTCTTTGCCGCCGCCGCGGGAGCGGGTGGCCACAACCCGGCAATGGCGTCGTCGCCGCCGTCGTCGCTGCAGCTTCCGCTTCCCATGCCGCTGCCGCTGCCGCTGCCGCTGCCCATGGCTCCAGCCGGCGCCGGCGGCCTGCAGTTCTACCCCGACGCCGCCGCCGCCATGCTGAGGCCCATACGCGGCGTGCCGCTGTACCACCACCACCAGCAGCAGCACGCCGCGGCGGCGCCGTTCGTGGGCGCGGCGCCGCTGCCGCACCACCCGAGCTCAGGCGGCGCGTGCTACTGCGAGCCGTGCCACGTCGCCGGCGCGTGGCGCAGGGGTGGCTGCGGCGGCGGCGGCGCCCGCGGCGTGCTCCCGGCGAAGCGCGCCCCGCGCGCGCCGCGCATGCGCTGGACGTCCACCCTCCACGCCCGCTTCGTCCACGCCGTCGAGCTCCTCGGCGGCCATGACAGTATGTGCCCTCATCATCACCCATCCATAAAACTTCTTCAAATCTTGAAAACTTCATATGCCACCATCATCATCTTGTATTCTCGTGCTAAGCTAGGTCATGATTCTTGAGAAGTTTTTGTGCAAGTTTTAGCTAGGTTTCATTAATGATCTCATTCACATGAAACTTTAATTTGTTGATCGATATTTTTTTCAGGGGCAACGCCAAAGTCGGTTCTTGAGCTGATGGATGTGAAGGACCTCACCCTGGCTCATGTCAAGTCTCACTTGCAGGTAAATTTCACCACCATCTTCTTACTCCCTACTCATGCTTCTAGTACTAGCTACCATCACTCTTGTGAGCCTCCTCCTTCAGTCAAACCATCCCTTTGTATGTAATAAGAGAAAGAAATATGGAGTATAGGTAGTATATCTTTCCTAAAATATAATAACCTAACTTATACGAATCTAGACAGATGATCTATTCAGATTCCAGATTCGTGGTATTAGGACGAGTCAAAATTTATGTTTTGAGATAAATGAAGTATATATAAATATAGATAGAAGGATCTACTAGTAGTAGTAGAGAGGAATTGAAGTTACACAAAGATATGCATGGTCTCTCTGATCCTCCTGTCTGTTAGTACACCACACACACACTGCTCAATGCTGTAGTGTAGTACACACACATGCATGCAATAGATCACAACAATATAGTGAGAGAAAAAGGTACGCAGAGAGACAGTGAGCTACTATAAACTAGAGAGATGGCCAGATGGGGTTAAGTGGCAACAGTGCCACACTCTGTCATCTTCTGCATTTACACACATCTCTTGTACTACCACTACAAGTAATACTACTACTGTATCATGCATGGAAACTTCTCCTTTAGCTAGCTTAGGACAAGTCATTCCATGTAACAATACAGGTTTCACATCGATTGATCCATGCAAGTTGGGAGTATAGTACACTAGTTAACCTATCAATCACACATGTACATCATGTGTGCATGATTTGCATTGCAAAAATGTCAATGTGAATGGGTTAGGTTTCCATTCTTCTTCTCCCTCCTTTGATTAGCTAGCATTTTCAGATATCTGTCATGTCAAATCTCTCAGCCCATCATTTTCTGCAGGTGCAAATCTTGTGACGATTTGCCAAGGCACACATAATATATTCCTTGATATCTCTCTCCATATATGCATGATCCTAAACTAATCAGTGTCTTTTTTGGCCATGTTGTTGCTTGTTTCTGCAGATGTACAGGACAGTGAAGAATACCGAAAGGCCGGCAGCTTCGTCAGGTGAACAGTGCAAATATCTCATAATATGCTTTGCTTTAGAATAGATGCCTAGCTTAAGCACACGCGGTCGATCGCTTTAGCCTTCCATTTTTATTCTATTCGACGTGTTGTTGTTTTTGTGCTTCCAATCATCAACAACATCTTCTTCTTCACCATCACTTGTGTCTGGTATATTCTGCTCTCTGATATGATGCATTGACCAATATAATCAATGGCGCTAATGTGATGTTCTTCTTGTTTCCTTGATTTATTTTTGCAGATCAAGCTGATGGGTTTGAGAATGGGTCGGCCGGCGAGATCTGCGACGAGAACTCGCTCGACCTGCACGGCGGATGCAGGCCGGAGGCGATGTCGGCGGCGGCGACTGCGGCGGCGGCGGCGCGACATGGAAGGTTAGCTGCCTGTAACGATCATGGGAGCAGCACCGGTGCTCATGGCGCCCTGTGGAATAGCTCCTCAAGGTGGTCATCACTACTAATTAACTTTGTTTTGTTAAACAAATTTTATATTTCTCGAGAAAGTAGAGATACCTAAATTTTATACCGAAAATTTTGGTACATCGAACTACATAGCGGTAGCATTTAGAGGTATCAAATTTTATATTAGAAAATATGGTTATTCTTGATACCTTCTCAAGGACGGTAAAATTGTCCTATTTTGTTTCTGCAGTACACAATTACACAAGTGTAAATTAATTTTAAGACTATTAATCAAATTAATAGTATTTTGTGTGTGAAGAGAAGTGGTAATAAAGAAAAGTATATGTAGGATTAAGCATGGATCAAAGCTATAGCCTTTTGATTGATGTCACCTCACACTGCCATCTTAGGAGAGCTTTAATCCTTTAGGTCGGCATGGAAAGTGTATCAAGCTAGCAGCCTTCTTTTACACCCACATGCACATCATATCACATATATTATCCCCAGCTGGAGTAGTTTACACTGGAATCAGTTCCCGATAAATATGATCTTGATCAGAAAGTGCCCTACTCATTGAGACCCTGGAAACCCCTTTTGTCAAGGATCACCTAGACATGCTTGCATGCATCGATCTGCACATATATATGTGCTTCTTTCAATTATGACCTAATTATGCATGCATACATACCCCCATGCAGCATGCATGGTCCTTTTGTCAGTTTAGAGCGTGTACATGGAAGTTCATAGATAGTACTATAGGTAGTACTAACTAGTATATACAATAACTGAATAAGTTCAGATATCCATGTGATTTGTTTAGGAACAGTAGTCTATAGAAGTATGTAACACTCTCAAACTAACCTCTTAATTTTTTTTTTCTTCTTCTTAGTTTAGCCTCTCTCTTTTTTTTTTGTCAACAAAATGCATCTGACCTATATACTTGTGATGGTTATATAATTAACAAGGTTTAGTTGCATCTCTCTACAGGGAGGACTGGTCTGGCTTCCATGAGTCCAACACTGGAACCATGCAAACTCTGAAGGTAAATATATAAATGTTCACCTATACTGAATTTGCTACAATTAAAAGAGCAAAAAAATTGCTTCAAACCCAGCTGTAAGGTATGCGAGATTATATCACCTGCAACTTATGATCATTCTTGTGCAGGATATGCAATCCAAGAGCCTAGAGATCTTATCAGACATGAACTCCTGCGTTTCGGAGACGACATCGAGCACCAGCGAGCTGAACCTCGAGTTCACGCTAGGGCGACCACAAAACCGACCAAACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028027