BGIOSGA028028

From RiceWiki
Revision as of 07:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028028| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028028, complete gene.| tag = P0577B1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028028

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028028, complete gene.

LocusTag

P0577B11.115

Ensembl Transcript ID

BGIOSGA028028-TA

Ensembl Protein ID

BGIOSGA028028-PA

Length

2544

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3874529..3877072

Sequence Coding Region

3874529..3874654,3875518..3875652,3875737..3875784,3876741..3876865,3877057..3877072

Genome Context

<gbrowseImage1> name=IndicaChromosome08:3874529..3877072 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:3874529..3877072 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGGCGATTTCCCGAGCTGCTGCCCGCCTGCCACTTCTTCGACTGTCATCGCAAGCCCTTCTTCCTACCCAGATCGCTCGCTTCCGATCCGAGTTTGTCCAGCCTAACAAGCCCACCGCGGACGGTATCAAATTAGCACAAGCTGTTTGTGACACAGAGATGAACCTGGCAAGTATTCTGTTGGTGCAGAAATCTCTTGATGAGAAACTTGCACAGCACAAACTTCTTTCAAATGTTTCGCTGTTTGAGGATAAGGAAGTGAGTCAGAGGAGTGAAGAACACAGCAAACAACTGACCGTACAGGACATTCAGATGAAAAAGGACGAGTTGCTTAGTGATATTCGGAGGGTTGAGATCCTTGAAGGTACCTTACGCAGCTTGCAAAAAACTAGATTTCAGAGCCAAGATAACAACATATGTGCTCAAAGAATGAAAGTAGCCTAA</cdnaseq>

Protein Sequence

<aaseq>MASAISRAAARLPLLRLSSQALLPTQIARFRSEFVQPNKPTADGIKLAQAVCDTEMNLASILLVQKSLDEKLAQHKLLSNVSLFEDKEVSQRSEEHSKQLTVQDIQMKKDELLSDIRRVEILEGTLRSLQKTRFQSQDNNICAQRMKVA</aaseq>

Gene Sequence

<dnaseqindica>1..126#990..1124#1209..1256#2213..2337#2529..2544#ATGGCGTCGGCGATTTCCCGAGCTGCTGCCCGCCTGCCACTTCTTCGACTGTCATCGCAAGCCCTTCTTCCTACCCAGATCGCTCGCTTCCGATCCGAGTTTGTCCAGCCTAACAAGCCCACCGCGGTAAAACCCTTTTAAATCGCTGTTCTCCGTACTCTGCAAATCACGTTGTAGACGAAAATCATCTCTCTTATGCTCTTGTGGCTCTGTGGATTTCAATATATTTTCAATCAATAGCATAGTGAACATTTATTCTATGGCCCCCCTGTTTAGATCCCTCCTCAAAATTTTTTACCCTGTGACATTGAACGTTTCAACACCTGCATGAAGTATTAAATATAGTCTAAAAAATAATTAGTTGTATAGATTACGACTAATTTGCGAGACAAATCTTTTAAGCCTAATTGCTCCATGATTTGATAATGTTGTGCTACATTAAACATTTACTAATGATGGATTAATTAGGCTTAATAAATTTGTCTCGCGGTTTACTAACGGATTCTGTAATTAGTTTTTTTATTAGTGCCCAAACACCCATAAGATATCCTATATAATACCTGATGTGACACGCCAAAACTTTACACCCCTAAATATAAACACTCCCTATGTTACTAGCAAATTACCTACGCGTATAATCCAACGACAAAAAAAAAATCATGATTTACGCACTGCACTTTCATTATTTAAAGAATGTGTAGACCGACTTTTTCCGACCCCTTTAACTATATGGATTCCTTCACTACATACTTGTAAGATCTAACCAAATAATATGGACTTATTTTGTATATAGGCACTGTTCTTTTAGGGCACGCTTAAAATTTATTGAGCATGTGGGTTTCACGAACATGTAGGGCCCATACGTTAGTGATAGAGCTGGCAGATTTACTGCCGTCACCGCTACTATCTTTTATTAAAAGTAGTAGTGTTCTCTGGCTTTAGCACTTCCTATCAACACTAATTGTGCCACTCCATGATGTTTTTAACAGGACGGTATCAAATTAGCACAAGCTGTTTGTGACACAGAGATGAACCTGGCAAGTATTCTGTTGGTGCAGAAATCTCTTGATGAGAAACTTGCACAGCACAAACTTCTTTCAAATGTTTCGCTGTTTGAGGATAAGGTTAAGGCGTGCCTCTATTGCTATTCTTTATATACGTTGAACTAGATTTTGTACCATATTTATAGCTTTTTCTTTCTCTTACAGGAAGTGAGTCAGAGGAGTGAAGAACACAGCAAACAACTGACCGTACAGGTTATTCACATAAAAAAAATACATCTATTTTGTTGCCACCCTAGTTTTTTCTACAGTGCCCCGTGGCCAAATTGGTCACTAACAAGAAAACCTTGAATTCCATCATTGTTTATTATATGAATATAAATCCATGGTAGTTCATCGCATTAGCATCAGTAACCATCTTGCTTGAAGAGTCTCTATTGAGACTTGAGACTGCAAAACCCTCAACGGGTTAAATCGTAGCTAGACAGTGTTTCTTTCTTTTTTTAAGAGAGGCACCTTTTGTTCTCAAAGGCTCGGTATCGTCACATTATAACTTATCAGGTTAAGTAAATTTCACAAAACTGCAGATATGTTAGATCCAACTATTACAAAACTACAGATTTAATGCATTATATCACAAAACCGCAAATTTAGCGTCAATTTTTTATTAGAAAACTACATATTTAAGGCAAAGTATCGTATAACGACATATTTTATATCGATATTATCACAAAACTATAGATTTTAGAGTTCAAATCCCTAGCACTGTTATTATGTTATAGCTATGAACGTTTTAGTTTTGTGATTCAATTGGTACTAAATCTGTAGTTTTGGGATAAATTTACAACTTAATTTATAGTTTTGTAACAATGTGTCTTATAAATCTGTAGTTTTGCGAAATTTACTTCACTTTTTTTTGTGAAACAAACACATCAATAATATGAAATTTCTCAACATTCCTCAAAGGAATAATTGTTAAGTTCTAGAGGGGGTTGGCTCCTGCAATTTGCTTCCTTTTCAACGAAGGCTTTCACAACTTGCGCTGTGGAAAAGTCAAAGTGCATAAACTTGTGCTACAGCAGATAGCAATATTTGTTTACTTGTCGTTGTACATCAACAATCTATTACAGATATGTTTTTGTTCTATTCCAAGTAATACCTACGTTCATCTTCAGATCCTTCTTCAAGAACTGACATGTCTGAATATACAGGACATTCAGATGAAAAAGGACGAGTTGCTTAGTGATATTCGGAGGGTTGAGATCCTTGAAGGTACCTTACGCAGCTTGCAAAAAACTAGATTTCAGAGCCAAGATAACAACATATGTGCTCAAAGGTAAGTTACTTTACCAATTTGAATATAAAAATATTCCTTTTGCTGTGGTGTAATTTTTTTTTAACCCTTTTTCAACTTGTAGGTTGAAAGGCAGCGAGGATGGCTTTACATTATGCTACTCACCTTTAGATTTCGTTTCTTCTGCTGGCTTTTTCTATGTTTATTATTATTATTATTATTATTATATGTAGAATGAAAGTAGCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028028