BGIOSGA028032

From RiceWiki
Revision as of 07:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028032| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028032, complete gene.| tag = P0577B1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028032

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028032, complete gene.

LocusTag

P0577B11.128

Ensembl Transcript ID

BGIOSGA028032-TA

Ensembl Protein ID

BGIOSGA028032-PA

Length

3318

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3920280..3923597

Sequence Coding Region

3920280..3920303,3920576..3920608,3921162..3921278,3921592..3921663,3921765..3921931
,3922018..3922129,3922773..3922959,3923485..3923597

Genome Context

<gbrowseImage1> name=IndicaChromosome08:3920280..3923597 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:3920280..3923597 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCACAACCTGTTCCACCAGATTACTCAGAGAAATGTTTGCAGCAAGATCAATCAGGGAACAAGAGGTGCGCGCACTGTCGTCGCCGCCTCCGACTCCGACGACGACGAACAACTCCGCCACGTCGGATTTGGCATGGCTGCCGCGCCGCCGGCGTTCACCGGGAACCTCAAGAAAGCACTTGCAGGATTGAGAAGGATCAATTTAGATGGGTTGAGATGGCGTGTATTTGATGCAAAGGGTCAGGTGCTTGGACGGTTGGCATCCCAAATTGCTGTTGTGCTCCAAGGGAAGGACAAGCCAACTTATGCACCACATGTGGAAAACGGGGACATGTGTGTCGTACTTAACGCGAAAGATATCAGTGTCACGGGAAGGAAAATGACTGATAAGATTTACTACTGGCACACAGGGTATATTGGCCATTTGAAGGAAAGAAGACTCAAGGACCAGATGGAAAAGGACCCAACCGAGGTGATTCGCAAAGCTGTGATGCGCATGCTTCCCCGCAATAGATTGCGTGATGATAGGGATCGCAAACTGAGGATATTTTCTGGAAGTGAGCATCCCTTCCATGATCGCCCTCTTGAACCTTTTGCGATGCCACCGCGTCAGGTGCGCGAGATGCGCCCCCGGGCAAGACGGGCACTTATTAGGGCGCAGAAGAAAGAGCAGGACAGAGCAGCAGCATCAACCAAAGATGACAAAGATGAGGAGGAGGACAAAGGAAAGAAGATGCTTGAAGTTAAAGGGAAGGCAAGGAAAAAGGCCACACTTGGGGACAGAAAAGAAAGACTGATTTTCAACAAGCATGGAATAGCATAA</cdnaseq>

Protein Sequence

<aaseq>MHNLFHQITQRNVCSKINQGTRGARTVVAASDSDDDEQLRHVGFGMAAAPPAFTGNLKKALAGLRRINLDGLRWRVFDAKGQVLGRLASQIAVVLQGKDKPTYAPHVENGDMCVVLNAKDISVTGRKMTDKIYYWHTGYIGHLKERRLKDQMEKDPTEVIRKAVMRMLPRNRLRDDRDRKLRIFSGSEHPFHDRPLEPFAMPPRQVREMRPRARRALIRAQKKEQDRAAASTKDDKDEEEDKGKKMLEVKGKARKKATLGDRKERLIFNKHGIA</aaseq>

Gene Sequence

<dnaseqindica>1..24#297..329#883..999#1313..1384#1486..1652#1739..1850#2494..2680#3206..3318#ATGCACAACCTGTTCCACCAGATTGTACCTGAATTTTGTGCCTGTTGTTAATGTGAACCAATTCTCTCTTGTGTTTACTGTTTGCATCATCTTCTTGCACTTCTCCAGAGAAGGCTATTATAGTGTAGGACATCAATCAGAGCTACCGTACAATGATATATATATATGTATCTCCTCTTGTTGAGTTCAATGTAACCTTCTAATTTGTTCCTGAATTCTGTTCTGTTCCTTCCCTTTTGCTGGTTGGTATGTCTGTACTGACTGTGAATCTGTGATTACCTGGTGGAATATGAAAGACTCAGAGAAATGTTTGCAGCAAGATCAATCAGGTTCGTCAGCCTTGCACCTGGTCTAGACATTCCAGGTAAATGTAAATGGGCTCAAAGTACACATAAAGTGGTGTTCAATTTTTTTTTATGAAGGTACGAATTTTATCTTGTTTTCGATTAGTACGTTTTTTAAATTGTTAAACGGTTTATTTCGTGCAAAAACAACTTTCTATACAGAAGTTGCTTTAAAATATCAAATAAATTAATTTTAAAATCTTTAATAATTAAAACTTAATTAATCATGTGTTAATATGCTTGTTTTTTTACGCGCACTAACTTCATCATTATCATTATCTTCATTAGAAAAGAAAACTATCATAGCATGCAAAGCAAATGGGCTCAAAGTGCACTTGGCATGGAAAGCAAATGGGCTCAAAGCCCATCTTTTTCTTTCCACTTTGGAGTTTGGAGAGACCGAGACGCTGGATGAACTGAACCCTGCGCCGCCGCCGCCGCCGCCGCCACCGTAGTCAGCAAGCGACGACGAGATGGTAAGATCCTGAGTCGTATTCATCCTCTGCGCGCTCGCTCGATTTGGTTGCGTTGTCCTCAGGGAACAAGAGGTGCGCGCACTGTCGTCGCCGCCTCCGACTCCGACGACGACGAACAACTCCGCCACGTCGGATTTGGCATGGCTGCCGCGCCGCCGGCGTTCACCGGGAACCTCAAGGTGAGTGGTGGTGGCGGCTTGATCAGATTGGTTGATTTGACGTGCTTTCTTTTCGTTGATTGCAAGTTGGGATTTTGATAGGTACTCACTGTCACCTCCGTGAAAGAACCACCTTTTGTTAGTTATATGTAGATATCTACCAGTTCTTGCAGAATTCTTGATTTTGTAGTAAACTATAGTTACCTAAATAACCATCCCATATCTACCTGTAGTTTTGGTCTCTTTAGCTTTGGACTTACATGGGTGCAGTTTCTGAACAATTTACCTACTACCAGTACTGGCACTGACAGTCGTCTCTGTCTGAACTTTGCAGAAAGCACTTGCAGGATTGAGAAGGATCAATTTAGATGGGTTGAGATGGCGTGTATTTGATGCAAAGGGTCAGGTTAGCAATCCTTCTGATTTTGCTTCAATTTACGGAAGATGTATTTATGTGGAATGCAGGAATGGTTATGCAGTAAGCTACTTTGCTGTTTATGTTGATAGGTGCTTGGACGGTTGGCATCCCAAATTGCTGTTGTGCTCCAAGGGAAGGACAAGCCAACTTATGCACCACATGTGGAAAACGGGGACATGTGTGTCGTACTTAACGCGAAAGATATCAGTGTCACGGGAAGGAAAATGACTGATAAGATTTACTACTGGCACACAGGGTCTGTATGTTTCTAGCAAATAGTACTTGAAATGTTGAATACCTCATTTGGTTTTACTAACATCCTGTTCGTTTTTCCCTCGAAAGGTATATTGGCCATTTGAAGGAAAGAAGACTCAAGGACCAGATGGAAAAGGACCCAACCGAGGTGATTCGCAAAGCTGTGATGCGCATGCTTCCCCGCAATAGATTGCGTGATGTAAGTACCATTTGTTTTCACGAGTCAGGATTAGACATTAATTCATTGTCTAAGTTTGGTTGATGACTTGTTAGATTTAGCTCCTGAGTTTTCTATATACTCTTTGTCTGCCCAAAATGTAATGTAATATTGTAATGATTACTGTGTGCATCTTCATGCCAATGCTTCTACATATGTGTTAGCTATATGATATTATCTGTTCAATTATAGTATTATAGACTAGGCAGTTTCGTCATGCATTGATGCACAAGCAGCAATGCTACTTTCTTATTATTCATTAAGCCATGGGATTCTAGTATATTAGCAAACCCTTCTATCTCAAGACTTGGAGATTAATTTTCGAGCTTGCATTTTGTATAACATAGAACAAATTCAGTGTCCTATCATAAAATTTACTTTAACCATCAGTTCTTTTGTGTTGTTACAAGTGACTGATATCATATATGAATTTGTGCACTGATTTGTGACGACATTTCCTTGTTACAACTCTGTTTTGTTTGAGAGTCCAAACCATTTTCTCCTGGTATAAAGCAAATATTTGGTCAATAATCTATGCTTTCTATTATTTTCCCCTTAAAATTGTTGAAGGGGCTTTAATGATACTTCTACTGCCTGTTAATCATCTATTGTTACAACCCTCCAGGATAGGGATCGCAAACTGAGGATATTTTCTGGAAGTGAGCATCCCTTCCATGATCGCCCTCTTGAACCTTTTGCGATGCCACCGCGTCAGGTGCGCGAGATGCGCCCCCGGGCAAGACGGGCACTTATTAGGGCGCAGAAGAAAGAGCAGGACAGAGCAGCAGCATCAACCAAAGATGACAAAGATGGTAAGAGTGCCAATACTGATGTCACTTCATAGGCATCTTGGGATTATTTTTGGCATGTAGCCTGTTGAGCTGAATATGCACTACAAGTCTAGGACCATGTAACTTGGAAATGAGCAGCCCAATCTGGATATCTTTCTATGTTATATACAGCATATAATACTCAAATTACATTGTTGCTAATTCCTCCAAGGGAATAAATTCCTCACCTGCATTTTCTGTTCTGTCCATTTGGCTCTTGGATTGTGCAATAATCAGATTATATCGAAATGTTCAGTATACTGGTTGAGTGGGCTCAAAGTAAACTATGGGCTTCAGGCCTCATAGTAAGAACATATTTTCCATTCTGTCCCTCTTTTTTTTTTCTGAACCAAAAAAAAAAAGGAAGGCAGAGTGAGTGAGTGAGAAAGGGACATGAGATCAGAATCATGAGATTCAGATATCCTTGGATAGCTTGGTCTCTTGGAATAACTAGAAAAGGCTGGATATGACCATGTATGTGCTATGTGCATATATGGTTGCCTGCAGAGGAGGAGGACAAAGGAAAGAAGATGCTTGAAGTTAAAGGGAAGGCAAGGAAAAAGGCCACACTTGGGGACAGAAAAGAAAGACTGATTTTCAACAAGCATGGAATAGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028032