BGIOSGA028079

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Revision as of 07:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028079| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028079, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA028079

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028079, complete gene.

LocusTag

OSJNBA0054L03.34

Ensembl Transcript ID

BGIOSGA028079-TA

Ensembl Protein ID

BGIOSGA028079-PA

Length

5980

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4632841..4638820

Sequence Coding Region

4632841..4633136,4633487..4633603,4637579..4637585,4637684..4637829,4638322..4638820

Genome Context

<gbrowseImage1> name=IndicaChromosome08:4632841..4638820 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:4632841..4638820 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCGCCGTCGTCGAGGTTTTCCGGCGACGTTGTTGGTCACGCTGCTGCGGCTCGTCGGCTGCCTGCTTCTCGTCTGCCTCGCCGCGCCGCCGTGCGCGGCGCAGCAGGTCAAGACGTCGCACGCGCAGTTCGCGTTCCACCTCCCGCTCCCCGATGGCGTCACCGGCGCCGAGAGCCTCGCCTTCGACTCCTCCAACCATGGCCCCTACACCGGCGTCTCCCACGGCCGCGTCCTCCGCTGGGGCGGCGCCGCCGCCGGCTGGACCACCTTCGCGCACCACCAAGACTACCGGAAGATCCCGATGTGCACGACGCCGGTGGCGCCGCCGGAGGAGACGGAGAGCATGTGCAGGCGGCCGCTCGGGCTCGCGTTCCACGACAGGACGGGCGACCTCTACATCGCCGACGCTTTACATATGCGTGTCGGGCCGCGCGGCGGCGAGGCTGAGGTGCTTGCCGCCGGCGAGGACGGCGTCCCGTTCAACTTCGTCAATGGCATCGACGTCGACCAGGCCACCGGTGATGTCTACTTCACCGATAGTAGCACCACCTACCCACGCCGGTTTAACAGCGAGATCATGATGAATGCCGATGCGACATCGCGGCTGCTGAAGTACGACGCGGCGACGAAGCAGGTGACCGTGCTCAGGTCCGGGCTTCCGTACGCCAATGGCGTGGCCGTCAGCCGCGACGGGAGCCACGCCGTGGTGGCGCACACGGTGCCGTGCCAGGCGTTCCGGTACTGGATCAAGGGGCCCAACGCCGGCGAGTACGAGCTCCTCGCCGACCTGCCGGGTTACCCCGACAACGTCCGGCGAGACGCCAGGGGGGGATACTGGGTGGCGCTCAACCAGGAGAAGGTGCGGCTCGACGCGACGGCGGCGGCGGCGGTGGCTCCTCCGGCGAAGCACCTCGTCGGCGTCCGGCTCGACGGCGATGGCGTCGAGGTCGAGGAGCTGACGACTGCCAAGGGTGTGACGCTCAGTGAGGTTGTGGAGAGGGGCGGGAAATTGTGGCTCGGCTCTGTTGAACTCGATTTCATTGGCCTAATAATGCAATGA</cdnaseq>

Protein Sequence

<aaseq>MARRRRGFPATLLVTLLRLVGCLLLVCLAAPPCAAQQVKTSHAQFAFHLPLPDGVTGAESLAFDSSNHGPYTGVSHGRVLRWGGAAAGWTTFAHHQDYRKIPMCTTPVAPPEETESMCRRPLGLAFHDRTGDLYIADALHMRVGPRGGEAEVLAAGEDGVPFNFVNGIDVDQATGDVYFTDSSTTYPRRFNSEIMMNADATSRLLKYDAATKQVTVLRSGLPYANGVAVSRDGSHAVVAHTVPCQAFRYWIKGPNAGEYELLADLPGYPDNVRRDARGGYWVALNQEKVRLDATAAAAVAPPAKHLVGVRLDGDGVEVEELTTAKGVTLSEVVERGGKLWLGSVELDFIGLIMQ</aaseq>

Gene Sequence

<dnaseqindica>1..296#647..763#4739..4745#4844..4989#5482..5980#ATGGCTCGCCGTCGTCGAGGTTTTCCGGCGACGTTGTTGGTCACGCTGCTGCGGCTCGTCGGCTGCCTGCTTCTCGTCTGCCTCGCCGCGCCGCCGTGCGCGGCGCAGCAGGTCAAGACGTCGCACGCGCAGTTCGCGTTCCACCTCCCGCTCCCCGATGGCGTCACCGGCGCCGAGAGCCTCGCCTTCGACTCCTCCAACCATGGCCCCTACACCGGCGTCTCCCACGGCCGCGTCCTCCGCTGGGGCGGCGCCGCCGCCGGCTGGACCACCTTCGCGCACCACCAAGACTACCGGTAAGTATACACCCCCTCACTCCGATCCATCGATTTTTGTTATTTTTTAGACTTTTTTTATTTTTTTCAATCCCCATTCATAGATTTTTCTAAAAAGTATTTCTAAATCTAAACCTTTTGGTCACACCAGCCAGCCCTGGCATGGCCATATAATTTTGTCACGCCACGAGCAGCTGGCGTGGCAAAACAACGCTGCCGCGCTAGTCACTCGAGGTTTAGTTTTCAAAAATATTTTTTGAAAAGATCTATTAATAAAATTAAAAAAATAAAAAAGTCTAGAAAATAAAAAATCTCCACTCCATCACGTGCTTGATCGATTGACATTGATGTGTTCGACCGTGTGCGTGCAGGAAGATCCCGATGTGCACGACGCCGGTGGCGCCGCCGGAGGAGACGGAGAGCATGTGCAGGCGGCCGCTCGGGCTCGCGTTCCACGACAGGACGGGCGACCTCTACATCGCCGACGCGTACAAGGGCCTGATGCTGTTGGAATTAATGAATGGGCCTTAGCCCACTCGAAGATTAATTCTTTGGAAAATCACAAAAGCCCACCTCATGGGATGGCATGCATGTGGAGTTTAGTACCACCTTGCTTATTCTAGGAGAGGGGGACCTCCTTAAAAGGGAGGATGCCCTCCTAGCCACTTGAAGCATGTGTGGTGGAGAGAAGAGGGGAAACACACGCGCGCGCTCGCTGGCCTGGCCTGGCAGGGCAGGGCAGGCGGCGCGCGTGCACGACGTACGCGTCGAATGGTCCGAAAAATTGGCTCCTCACCCTTGCGCAGATGCAGCCTCCTTTTGCAGTTTTGTTTTGCTGCAAATTCGGATTCGTTTTTGTTTTGGAGAAATCCGGTGCGTGCAAACGGCGTGGAGTCCGGATAAGTTACGCGCGACTTATCCGGTTCGGTTACGCGCAGTAGAGATCGTGCGGGCGCCCTGATCAAGCGATCCTTCTCTATATAAACCGACCTACCGTCTTCACGCAACATATGCGAAATCAATCTAGGGTTTGCCTCCTACTCTGTACTGCGCAGTCGCTCGCAGACTACTCCATCCCGCTCGCCGGCGTGCACCGGCGATCGGGAGAGCAGGTCTCCGGAACCTCTGCCTTCGACGTCTTGCACCGGGAGAAGGCGGCAATAAGGTTTTTGGGAAGCGCTTCGCGCGACTGCTCCCTATTTGTTCGCGACGGCTCGCCTTCCTCTTCGCTCGCGTGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGATGTTGAGGAGAAAGCTCGGGAAAAAGATGCCGCGTCTAAGGGCGATGGTGGGCAGTCCAGTGCCAATGTTGTGCACAAGGCCCAGAACAAGAGCAAGGGGAAATACAAAGCTCATCAGACCACCAACTTCAAGAAGCAGAAGAAGAACAACAACAATCCTAATCAGGATGAGAGGACTTGCTTTGTGTGCGGCCAAGTTGGTCATCTGGCTAGGAAGTGTCCACAGCGCAAGGGGATGAAGGCACCTGCAGGGCAGACTTCTAAGTCTGCTAATGTGACCATTGGCAACACTGGAGATGGAAGCGGGTATGGTAATTTACCTACTGTTTTTTCAGTTAATCAATCTACTAATTGGTGGGTTGATACTGGGGCCAATGTACATGTTTGTGCTGACATCTCATTGTTTTCTTCTTATCAGGTCGCACGGGGTTCCACCGTCCTAATGGGGAATGGGTCACATGCTTCTGTTCATGGTGTTGGCACGGTAGATCTGAAGTTTACTTCGGGAAAGATCGTGCAGCTGAAGAACGTGCAGCATGTCCCTTCTATCGACAGGAATCTTGTTAGTGGCTCCCGTCTGACTAGAGACGGATTTAAGTTGGTTTTTGAGTCTAATAAAGTAGTCGTGTCTAAACATGGATATTTTATTGGTAAAGGTTATGAGTGCGGAGGCCTGTTCCGTTTTTCCCTTTCTAATTTCTGCAATAAGTCTGTGAACCATATTTGTGGCAGTGTGGATGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATGAAGGATTTGGGAGTAGCTGATGTTATCTTAAACATTAAGCTAATTAGAGGTGAGAATGGGATTACACTCTTGCAGTCCCATTATGTGGAGAAGATCTTGAATCGTTTTGGCTACATTGATAGTAAGCCTTCTCCAACACCTTATGATCCTAGCTTGTTGCTTCGCAAGAACAAGAGAATTGCTAGGAATCAACTGGAATACTCCCAAATCATTGGCTCGTTGATGTACCTGGCTAGTGCAACTAGGCCTGATATCTCCTTTGCTGTGAGCAAGTTGAGCCGATTTACCTCTAATCCGGGAGATGATCACTGGCGTGCGCTTGAGCGAGTAATGCGCTATCTGAAAGGTACTGTGGAATTGGGGCTTCACTATGCTGGGTATCCTGCGGTACTGGAGGGTTATAGTGATTCTAACTGGATCTCTGATGTGGATGAGATCAAAGCCACTAGTGGATATGTTTTCACACTGGGTGGTGGTGCTGTTTCATGGAGGTCTTGCAAACAGACCATTTTGACGAGGTCAACCATGGAAGCAGAGCTAACGGCACTGGATACTGCTACTGTTGAGACAGAATGGCTGCGTGATCTATTAATGGATCTGCCTGTTGTTGAAAAACCGGTGCCGGCTATCCTTATGAACTGTGACAATCAAACGGTAATTGTCAAAGTGAATAGTTCTAAGGATAATATGAAATCGTCTAGACATGTGAAAAGACGATTGAAGTCTGTCAGGAAATTAAGAAACTCCGGAGTTATAACGTTGGATTACATCCAAACAGCGAGAAACCTAGCAGATCCCTTCACGAAGGGACTATCACGAAATGTGATAGATAATGCATCGAAGGAGATGGGTTTGAGACCCATGTGAGTTATACTATGGTGGTAACCTAGTCTATGTGATCGGAGATCCCGTGAATTAGATCCTGGGGAAGAACAAACCATTAATAAACTAGAGGAGAGTACCAATATATATACCCTCTCCAAGTGAAGATGCATATACTCTCGTGAGCTGCAAGGCAGGTTGGCTATGCCTTAATGAGTTCTGTTGGCTTTAATTAGCGAAGATGTTGTCCTGCAGAGCATTCTTGAAAGAACTCACCTTTGTGAGCTTGACTGTTGGTCGCAGTCTATGAAGATTTTGGGTGAATCTTCTAGGAAGCTTACTAAAGACCTAGGAGTATGACTTATACGCTCCACCCGAGGGGTAGTATACAGACGGTCTAGTACCAGATAAGACTTTGAGTGAAACTTGCTTGCACAAGACTTGCAATTCAAGGCGTAGTCCATTGTTCAAGTTGTGAGTAAGTGTAGCTTGGAGTTCTAGGTGGATGTTCAACCTTAATTGGTCTCCATCGAACCGCTGGTATATAAACAGTATATTGGAAAAGGCAAATCTCAGTGGGATTTTGAGATTTGGTGGGGGATTGTTGGAATTAATGAATGGGCCTTAGCCCACTCGAAGATTAATTCTTTGGAAAATCACAAAAGCCCACCTCATGGGATGGCATGCATGTGGAGTTTAGTACCACCTTGCTTAAAAGGGAGGATGCCCTCCTAGCCACTTGAAGCATGTGTGGTGGAGAGAAGAGGGGAAACACACGCGCGCGCTCGCTGGCCTGGCCTGGCAGGGCAGGGCAGGCGGCGCGCGTGCACGACGTACGCGTCGAATGGTCCGAAAAATTGGCTCCTCACCCTTGCGCAGATGCAGCCTCCTTTTGCAGTTTTGTTTTGCTGCAAATTCGGATTCGTTTTTGTTTTGGAGAAATCCGGTGCTGTGCGAAACGTGCTGTGTGAGTCCTGGAATACAGTTACAGCTGTTGACTATATCACGTGTTCTGGTGTACAGCGACAGTTAGAAAGATCTGTAGCGTGTGCAGCCCATGAATTCAAAGCTGACTCCATTTCTTCTTATATTAANNNACCTGACCGTGGCCTGGTCAANNTCACGCAGAGGAGTGATGNNCGAAAATCAANNTCTAGTGTGTTTTGCCATCCAGTACATCATATACTTGCGGCCTGTCGACTCTGCAGCACTACATCTCATCCCCGCATCGCCAGGCATTGCACCTGTGCGATCTGGTGAGAGCAGTGTCTCCGTGAACCATCTGCACTTTCGACGTCCATGCGCCTGGGATGAACGGCGGCAATAGTGGTTTTTTGGGAAGCGCTTCGCGCGACTGGCTCGCCTTCCTCTTCGCTCGCGTGTTTCGTGCCTTCGTAGACACCTGCGAAAAGCTTCGACCAAGCAGCCGGTCTTTCCGTCACTTCGGTACGTGTTCAATATGTTGCGCATATTTGATCTGTTCATGTTATACTGTGTAGTTTACATGTATAGATCTAATGATGCGTTCATGCTAGTTTTCATCTGTAATGTCATGATTTATTTATGGAATAGATTAAATCATTATATGTCTATAATCTCAACAGATGCGTGTCGGGCCGCGCGGCGGCGAGGCTGAGGTGCTTGCCGCCGGCGAGGACGGCGTCCCGTTCAACTTCGTCAATGGCATCGACGTCGACCAGGCCACCGGTGATGTCTACTTCACCGATAGTAGCACCACCTACCCACGCCGGTAATTACCAAAAGAACACGATCCAAATTAAAATCAAATCATTTTTGCAACATGCAAATGTGTTTGCAATGCGTAGCAACAACGTGATCTTTTGGGAAAGTGTTTTCATCCCTAAGTTTTTTAAGTAATTCAAATAGCCACTATTTTTTCTAAAAAAAAATTGATATAATCATTATGAGATATATCACTTCACACAATCGTGCAAGTTTAAATTTAATTTGTACAAGTAAAAAAAATTAACAAATTTAATTGCGAATAGCACATAATATTTGTAGTCAAAATATTCATTATTTTTTTTACAATTATATATGTTGAATTTGAACTTGTTTATATAGTAACATATCTCATATTGATCCATCTTATCAAAAGTTTCTAAATTTTCTTGTAATTTCTTTAGTGGTATACGTAAAATAAGGGGATATTCTCTCGAGGAATGAAAATCCACTTCCTGATGATCTCACTAACAAGAGTTGTGTGTTCATGTGGATGCAGGTTTAACAGCGAGATCATGATGAATGCCGATGCGACATCGCGGCTGCTGAAGTACGACGCGGCGACGAAGCAGGTGACCGTGCTCAGGTCCGGGCTTCCGTACGCCAATGGCGTGGCCGTCAGCCGCGACGGGAGCCACGCCGTGGTGGCGCACACGGTGCCGTGCCAGGCGTTCCGGTACTGGATCAAGGGGCCCAACGCCGGCGAGTACGAGCTCCTCGCCGACCTGCCGGGTTACCCCGACAACGTCCGGCGAGACGCCAGGGGGGGATACTGGGTGGCGCTCAACCAGGAGAAGGTGCGGCTCGACGCGACGGCGGCGGCGGCGGTGGCTCCTCCGGCGAAGCACCTCGTCGGCGTCCGGCTCGACGGCGATGGCGTCGAGGTCGAGGAGCTGACGACTGCCAAGGGTGTGACGCTCAGTGAGGTTGTGGAGAGGGGCGGGAAATTGTGGCTCGGCTCTGTTGAACTCGATTTCATTGGCCTAATAATGCAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028079