BGIOSGA028081

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Revision as of 07:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028081| Description = BGIOSGA028081| Definition = Oryza sativa Indica Group BGIOSGA028081, complete gene.| tag = | tid = BGIOSGA028081-TA|...")
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Gene Name

BGIOSGA028081

Description

BGIOSGA028081

Definition

Oryza sativa Indica Group BGIOSGA028081, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA028081-TA

Ensembl Protein ID

BGIOSGA028081-PA

Length

3154

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4808440..4811593

Sequence Coding Region

4808440..4808704,4808824..4808968,4809058..4809102,4809364..4809449,4809612..4809664
,4809779..4809838,4810515..4810616,4811038..4811157,4811339..4811593

Genome Context

<gbrowseImage1> name=IndicaChromosome08:4808440..4811593 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:4808440..4811593 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGGATCCCACCACCGGCGGCGGCGGCGCGGCGGGCCGGAGCCCCGAGGACGAGGTGGCGGAGTCCTTCTTCCGCGCCGCGCCGCCGCTCCGCGACCGGGACCGCGTCGCCGGGGACCTCGCCGCCTTCGTCGCCCGCCACGCCGGCAAGTCCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGGAGCGGAGGAGGAGGAGGAGGAGGGGGGAGGCTCGCCGGGGTGGTCTGCGTCACCTCCGGCGGCACGACGGTGCCCCTGGAGCAGCGGTGCGTGCGATACATCGACAACTTCAGCTCCGGCCAGAGAGGGGCCGCGTCCACCGAGTACTTTCTCAAAGCTGGCTACGCCGTCATCTTCATCTACCGCCGTGGGAGCAAGCAACCTTACTGTAGGTTTCTTCCAGAGGATTCCTTTCTTGATTTATTCGAGCTTGGTGAAGAATCAGATATCCAAGTCCCAGAATCTCATGCCGCGGTTGTCAAGACAGCAATAAGAAATTATCGAAAGGCGATTGATGAAGGCCTATTGCTGAAACTTCCTTTCACCACTATCTTTGAGTACCTTCAGTTACTGCAAATGGTAGCTACGGCGATGAATTGCTTGGGACGCCAAGGAATGTTTTACCTTGCTGCGGCAGTTTCTGACTTTTATGTTCCATGGGAAAGCATGGCTAAACATAAAATCGAGTCAGCAAGTGGCCCTTTGAACATGCAACTCAATCAAGTTCCGAAGATGCTTTTCATTCTGAGAAAACAATGGTCTCCTTCAGCATTTTGTGTATCCTTCAAGCTTGAGACGGACCCAGATATCCTTCTGCAGAAGGCAGAGGCAGCTCTGAGAAAGTATGGTATGAATGTCGTGGTCGCCAACGAGCTAGCGAACTACAAAGATGTAGTTGTGATGGTCACAAGCAATGGGAGGACAACCGTGCGAAGGCCCAGCAAGGAGGATGACGTCGAAGAACAGTTAATCGATCTCTTGGTAGAGATGCACTCTGAACACATCATGCAGCTCAATCAAGACCATCAGACGTGCACAAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MAADPTTGGGGAAGRSPEDEVAESFFRAAPPLRDRDRVAGDLAAFVARHAGKSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGGGGGGGGRLAGVVCVTSGGTTVPLEQRCVRYIDNFSSGQRGAASTEYFLKAGYAVIFIYRRGSKQPYCRFLPEDSFLDLFELGEESDIQVPESHAAVVKTAIRNYRKAIDEGLLLKLPFTTIFEYLQLLQMVATAMNCLGRQGMFYLAAAVSDFYVPWESMAKHKIESASGPLNMQLNQVPKMLFILRKQWSPSAFCVSFKLETDPDILLQKAEAALRKYGMNVVVANELANYKDVVVMVTSNGRTTVRRPSKEDDVEEQLIDLLVEMHSEHIMQLNQDHQTCTS</aaseq>

Gene Sequence

<dnaseqindica>1..265#385..529#619..663#925..1010#1173..1225#1340..1399#2076..2177#2599..2718#2900..3154#ATGGCCGCGGATCCCACCACCGGCGGCGGCGGCGCGGCGGGCCGGAGCCCCGAGGACGAGGTGGCGGAGTCCTTCTTCCGCGCCGCGCCGCCGCTCCGCGACCGGGACCGCGTCGCCGGGGACCTCGCCGCCTTCGTCGCCCGCCACGCCGGCAAGTCCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGTCCCTCCCCCCCCCCCCCCCCCCTCGCCTCCTCCTTCCCTCTCCTCCGATCTCATCTCCTTCGATGCGTCGCGTGGGTGGGTGAGTTGCTGATCTCGATCGTGTTTGGTGGTGGGTAGGGAGCGGAGGAGGAGGAGGAGGAGGGGGGAGGCTCGCCGGGGTGGTCTGCGTCACCTCCGGCGGCACGACGGTGCCCCTGGAGCAGCGGTGCGTGCGATACATCGACAACTTCAGCTCCGGCCAGAGAGGGGCCGCGTCCACCGAGTATGCTTAGTAACTCTCATTGCTGTTCTTCTCTCTGCTTTGTACTACAACTGTTTGGTGCTAATTTTCAGCTTGCTGGTAAAATTCAGGTACTTTCTCAAAGCTGGCTACGCCGTCATCTTCATCTACCGCCGGTAAGTTCAAAAAGAAAAAAAAAGTTCAACAATTCAATTGTAAGTTCAGAGGAGCTGAAGTTGTTACTGCATGCTAGTTTACGATCATTGTGTAGATAGACAGTGCTTGGGACGTTTTTAGGGAATAAAGAAGAGACAAAAACCAGTGTAGATAGACAGTGCAAGCTGTTTTGTTTACTTTTCTTTCTTTTTTGATTTGTTTTAGTTCTCAATGCCCCATTTAGTGGAAGAGTTGTGAGTGACATCAGCGCCTCTTTGCAGTGGGAGCAAGCAACCTTACTGTAGGTTTCTTCCAGAGGATTCCTTTCTTGATTTATTCGAGCTTGGTGAAGAATCAGATATCCAAGGTTGGGGATTGATCCTAAATTATTTATATTTATGCCAACTGAATTATCTGTTGTTTTTGCTTCTTTTTTTCATTTTTAGATGTTTGACCTTAATTATAAACATTTATTGATATGAAATGAAAAGACTAAATGATAAACTCTCATGTAAGTTACTTACCTCAGTCCCAGAATCTCATGCCGCGGTTGTCAAGACAGCAATAAGAAATTATCGAAAGGTATAAACAGTTCTGTTTTAACTCCATGAAACTAGTCTCATGCGCTGGTTACAACTTACAACTGGTCAGACTGGTACAGTTGTGTGACCATTGGCTTGGTTTCCTTGATTGCAGGCGATTGATGAAGGCCTATTGCTGAAACTTCCTTTCACCACTATCTTTGAGTACCTTCAGGTTTTGCTCATTATTCCTACAGAAACGTGTTATCATATACACGCTATCATAAAGACAGAGGACTTAGTCAGTCTCACGAGAAAGGCCTAGGGGTCTTCCGGCTAGCACCACAAGGTGTGGGCTATTCGACCTGGGTTCGAGCCTCACCCCTATCTTAATAAATTTCGATCTGAGAGCCCTTCCTCTCATATCCAGTGTTTTTTTTTCAGTCGGTCTCACACATAGCGATGCAAGTGGATCTGGATGGACTTGGCCCAATGGCCCATGCTAGTTCATTTGCTTGAATTATAATTCAAATGCATATATACATATTTGACCAGAAAGTGACTCATCAATTGAGTAAAATGGGCCAATGGCCAGGTGTCCAGTCCAATTACATTTGTGCTCACACGTCCACTACTGCTGGTGTTTAAAACATTTTATACCTTGTTTCGTTGAATATATTACTATATGACTTAGCATTGCAAAAGAATTCAATCACGATCTGTCTCCAATACATTAAGGTGGGGAGATGACTGGATTTTGAAAATCCAGTCATAATTTAGACTGTCTTAGATATCGTATGCTTTAGGAACTTGCCAATTTTCTGTTATGTTCTACAGCAAAAGATTAACCTTGGCATACTGTTATACTGATGAGGAATCTGATATATCTCTTCTGCTTGTTTTTCCAATAGTTACTGCAAATGGTAGCTACGGCGATGAATTGCTTGGGACGCCAAGGAATGTTTTACCTTGCTGCGGCAGTTTCTGACTTTTATGTTCCATGGGAAAGCATGGTAGGCTCTACTCTTCTGATCATTTCATTGTAGTAAAACAAACAAATAGCCTATATGTTCATTGCATTTGGTGTATATATCAGTTAATGATGCTCGTAGGCTTCTAGATGGTGTTTGTCATTGGACATTATAGGTGCCTGGCTTTTCCCTAAATCAGGGGATCCTTATTTAAGAGATCACAGCCCCCTCTTACTTACACCATGTTAGAGTTATACCATTTCAAAATCTTGAAACTCAGGAACCATGTATTGGTATTGAAACATATGATTTTTTTTCGTAACTAGTTATGAAAATGGTAGTTTCGTAGCATAGTAATGGACTCCTTGTTATCAGATGTTTCATGTATATTGGCATATTGCATCCAATGCACTAGTAGTTGCAGGCAACATGGTCATTATGTACCTCGCGCATGTTTTGGCAGGCTAAACATAAAATCGAGTCAGCAAGTGGCCCTTTGAACATGCAACTCAATCAAGTTCCGAAGATGCTTTTCATTCTGAGAAAACAATGGTCTCCTTCAGCATTTTGTGTATCCTTCAAGGTTAGTTTGATTTATTTTCACACTTCCATATGGAGCTATGGTTGCTCAAGCTTTTTTCTGCATTAAAGAAAACCTCAGTGTACCTTCATTCTGCTCGTGTTACTCTCGAAATATCTTATTTTCTAGAGTCGAGATGACTAGACCCACCTTACTGCTGGCGCCTAATACATGCACATTACAGCTTGAGACGGACCCAGATATCCTTCTGCAGAAGGCAGAGGCAGCTCTGAGAAAGTATGGTATGAATGTCGTGGTCGCCAACGAGCTAGCGAACTACAAAGATGTAGTTGTGATGGTCACAAGCAATGGGAGGACAACCGTGCGAAGGCCCAGCAAGGAGGATGACGTCGAAGAACAGTTAATCGATCTCTTGGTAGAGATGCACTCTGAACACATCATGCAGCTCAATCAAGACCATCAGACGTGCACAAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028081