BGIOSGA028099

From RiceWiki
Revision as of 07:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028099| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028099, complete gene.| tag = OsI_280...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028099

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028099, complete gene.

LocusTag

OsI_28049

Ensembl Transcript ID

BGIOSGA028099-TA

Ensembl Protein ID

BGIOSGA028099-PA

Length

4206

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5078224..5082429

Sequence Coding Region

5078224..5078469,5079006..5079312,5080325..5081847,5081953..5082429

Genome Context

<gbrowseImage1> name=IndicaChromosome08:5078224..5082429 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:5078224..5082429 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCGCGACCGCTCAAGTTGCAGTGAAGCTAAGCACTGGAGAGGATCTCAACCCGCCTCCGCTTCTCTCCAGTCTCCATCCCCCTCTCTCTCCTCTGCTTCCGGCGGACGCGCCGCCGGCCATCTCCCCGCCGCCTCGCCGCCTCGCAAGCGCCACCCCGCCCGCCGGCGAAGAGCTTTGTGTGCGCGGCGTTGGACCGGCCTTCCTTTACTTGCCGGACCGACCACGCGCGGCCGGCGAGCAGGCAGTTATGGATCCCATGGATGATCATGACAGTGACGAGTTGCCGTCAGGGGTGGCGTCAGATGAAGCTCACGTTGCCTTCAGAGCGAGAACTAAGAAAAGGTCCAAGGTGTGGGATGAGTACAAGCCTATCTATGTAAACGGAGTGGTTCAAAGCGCGGAATGCCGCTACTGCCATATTCTGATGAGTTGCAAAGGTTCTGATGGACACTCCAATGGAACGAGTCATTTGTGGCGGCATCAGAAAATTTGCCGGGCGAAAGAGGACTTGGATCTGGCTCAGTTACATGATACTGGTTTCCCATATGTGATGAATGATATTAATCCGGTGGATCAAATTCATCCAGATTCACTTGATGATATAAAATTGGCAAGTCACAGTGACAACAGCAGGTTCAGATCAAAGGTGTGGGAGGAGTTTACGCCTGTATATGTTGAGGGGAGAATCCAGGGTGCTGAATGTCTCCATTGCCACAAGCGACTTAGTGCAGATAAAGGTAGAAGCCATTTGAACCGGCATACTCAGACTTGTCCGGCACGAGGAGAAACTGGAATAAATCATAAGAGTCCGTTTTCTCCCTCCAGTGCACCAAGTTTTAAATCTGGGGTTCAGGATGAGCTTTCACCTGCCTTGACAAACGGTAAAGTTCAGATTGCAGAGTATGCTAGCAAACTTCTCAAGGTTAATAGCTCAGTTGACAAAACTCCCCAGAGCCAGCACATTCTAGCTTTGCCAGCACGAGACAACATGACCAAAGAACAAAATACCTCATCTACTCATGCTGCTCCAGATGTAAGCACCAGTAAATTTGATCAGGAAACATCTTATCAAGAGCTAATTAGAATGATAGTTTTGCATGGATATCCCTTGTCAATCGTGGAACATGAAGAAATGAAAAGATTTGCAAAAAGCCTCAACCCGTTGTTTAACATGGCATCAAGCATTGATGTGGAAGAGTATTCAACTCTTTTATATCAGAAAGAAAAGGCTGACCTTAAGGAGAAAATTGCTGCACTTTCATCCCGACGGATTTCCTTATCAGCAAGCATTTGGGCTCCTCATGGAGCTGAGCCCACTGTGAAGTACATCTGTTTGACAGCGCACTTTATTGATGCAGAATGGAGGCTTCAAAGGAAAATAATCAAGTTTGGTGTGTTTTGGTCGTTGCCTACTGATTTGGAAAGAATGATACTTTATAAGGAGGCTTGTGTATTAGACTCTGAAAGTGGGCCATATAATGTCATAGCAGAAGCTATAAGTGATTGGAATCTTGATAATAAGCTTTTTAGCTTGATATCCGTCAGTGAAATTAGAAACCATGAAGGTACCACAAAGCTTAAGGACATGCTCATACAAAAAAATAGTCTTCCTATTAGAGGTGAGCTATACAATATTGCCTGTGTGGATGACGTGCTTAACAACATTGTTTCAAAAGGGCAATCAATGCTTCACCTTGTTGATAATATACTAGAAAGATTTATGCTGGCACATGCGTACTCATCGTTAACTCAACAGCAACTTTTTGAAGCTGTTACAAACATGGGTTTGAAGTGTCCCCAGGAAGACGCAAAATGGTGGCACAAAATTTACTTCAGGCTTGAAGTTGTTCTGCATTGCAAGAAGGCATTTCCATCTGAAGAGTTGTTATCTGCAGAAGACTATAAGGTCGTTGAGTCTATCTGCAAGATTCTGAGGGCTTTTTATCGTGCTATTGAAGTAATCTCTGGTCCTGTTTGCCCAACAGCAAATGTGTACTTCAATGAATTATGGAAAGTTAGAACAACTTTGCAAGAAGAAGCATCTACTGATCACACTGAAGTTGCTAGCATGTTCCGTCTTAAACGAGCTTTCGGTGCTGAAGCAGCAAAGTATGTAGCTGCTGTACGTGAAATAATCAGGGAGCTGTTTCATGAATATTGCGGCCCTGTGGATAAAGGTGTTCACACATCAAACAATGAAGCTCGTGATGTTGAAATGGATGGATTTGACAGTGATTCATTGGAGGATTGGGATCAGCATCTTAGTGCACAATCAAGGAGCCAACGGTTGTCAGAGCTTGACAATTATCTCGAGGATGGCCTTGTTCCAAGGAAAGATGATTTTGATATTCTGAACTGGTGGATGATTCATTCTACAAAGTATCCAACTCTTTCAGTTATGGCACAGGATGTCTTGGCAATGCCATCATCTGCTCTTCATTGCAAGGCCGCCTTCAGCAGTGAGGGTCCAGTAATTCATAAGCAATGGAGCACTTTGAACATCAAGACAATTGAGGCGCTTGTGTGTACCCAGGATTGGATTAGATAG</cdnaseq>

Protein Sequence

<aaseq>MSATAQVAVKLSTGEDLNPPPLLSSLHPPLSPLLPADAPPAISPPPRRLASATPPAGEELCVRGVGPAFLYLPDRPRAAGEQAVMDPMDDHDSDELPSGVASDEAHVAFRARTKKRSKVWDEYKPIYVNGVVQSAECRYCHILMSCKGSDGHSNGTSHLWRHQKICRAKEDLDLAQLHDTGFPYVMNDINPVDQIHPDSLDDIKLASHSDNSRFRSKVWEEFTPVYVEGRIQGAECLHCHKRLSADKGRSHLNRHTQTCPARGETGINHKSPFSPSSAPSFKSGVQDELSPALTNGKVQIAEYASKLLKVNSSVDKTPQSQHILALPARDNMTKEQNTSSTHAAPDVSTSKFDQETSYQELIRMIVLHGYPLSIVEHEEMKRFAKSLNPLFNMASSIDVEEYSTLLYQKEKADLKEKIAALSSRRISLSASIWAPHGAEPTVKYICLTAHFIDAEWRLQRKIIKFGVFWSLPTDLERMILYKEACVLDSESGPYNVIAEAISDWNLDNKLFSLISVSEIRNHEGTTKLKDMLIQKNSLPIRGELYNIACVDDVLNNIVSKGQSMLHLVDNILERFMLAHAYSSLTQQQLFEAVTNMGLKCPQEDAKWWHKIYFRLEVVLHCKKAFPSEELLSAEDYKVVESICKILRAFYRAIEVISGPVCPTANVYFNELWKVRTTLQEEASTDHTEVASMFRLKRAFGAEAAKYVAAVREIIRELFHEYCGPVDKGVHTSNNEARDVEMDGFDSDSLEDWDQHLSAQSRSQRLSELDNYLEDGLVPRKDDFDILNWWMIHSTKYPTLSVMAQDVLAMPSSALHCKAAFSSEGPVIHKQWSTLNIKTIEALVCTQDWIR</aaseq>

Gene Sequence

<dnaseqindica>1..246#783..1089#2102..3624#3730..4206#ATGAGCGCGACCGCTCAAGTTGCAGTGAAGCTAAGCACTGGAGAGGATCTCAACCCGCCTCCGCTTCTCTCCAGTCTCCATCCCCCTCTCTCTCCTCTGCTTCCGGCGGACGCGCCGCCGGCCATCTCCCCGCCGCCTCGCCGCCTCGCAAGCGCCACCCCGCCCGCCGGCGAAGAGCTTTGTGTGCGCGGCGTTGGACCGGCCTTCCTTTACTTGCCGGACCGACCACGCGCGGCCGGCGAGCAGGTAGGTGGAAGGAGGGAGGGGCCCCGACGACGCGGCCGGCCTCGCTCCACCGGCCTCCGTCTCGGTTCGGCTCGAATTGGAGGTATTCGCTCTTTCTCTCGTAGCTCCTCCATCCTCCTACTCCTCCACAGCGCTTCGCGAGCGGTGTGTGCCTGTGTGGCGTAGACTGTAGATCTGTCAGGATTTGGATTCATCTCTTCCGCTCCAATTCGTTGATGAGCGGTGCAGAACTAAGAGCAGTTTGTTTCCGAAAAAAATTTGGGGTCCAGATGTTCAGTTGAACTCCCGTGTGGCCTTGCCCCTGTAAATTGTGGTTGAAGCTCGCAAGCACTGCTAATTTGCACAAAATCGTAGTCGTATCATCTCTTGTTGGGACTTCTCTCTGTAGACTGTAGTTGAGGTTGCCTGTTGTGTTAAGCTTGCTGCATGCTTCATAATCATTTACGTATGATCTTATCTTAGCTTTGTTGTACTTTTCCTGTGTTTTGTTTAACCACATACTGTAAAAATAATATGATTGTGGTGTATCTTTGTAGGCAGTTATGGATCCCATGGATGATCATGACAGTGACGAGTTGCCGTCAGGGGTGGCGTCAGATGAAGCTCACGTTGCCTTCAGAGCGAGAACTAAGAAAAGGTCCAAGGTGTGGGATGAGTACAAGCCTATCTATGTAAACGGAGTGGTTCAAAGCGCGGAATGCCGCTACTGCCATATTCTGATGAGTTGCAAAGGTTCTGATGGACACTCCAATGGAACGAGTCATTTGTGGCGGCATCAGAAAATTTGCCGGGCGAAAGAGGACTTGGATCTGGCTCAGTTACATGATACTGGTTTCCCATATGGTATGCTTGCTTTGTTTCCCTTGGGGATCATCTTCAGTTTAATTGGCATCTGCATCGGTGTATTAGTTGATTTGACAGTGTGTAAATTTTGTACTGTTTTATAGTCGTTGAGAGAGTTTTGGATGATCATCAACTTATTATGGTACCCTTGTATAAAGCATTCAAACTTTAACCTACTTTAGGCAATGATGATAATGATTAGGGACATTTTAACAATGACAATAGTTGAGGGCATTGCCTTTTAGGTGCTGTATATTAGCTTGTTGGTTAAATCAATGATAGGAATTATAGGGCATTCCCACTTAGGTGGTATATATTTTGTTATTTCTTAAAACAATGACAATATTTTATTAATATTTTGATCCCCTATCAGAGGAGCTGACAGAATGGGCTAGGCTTTAGCTGATGATTTTCCATGATTAAGAAGATCACATAAGGAATTATATAGATATGTTAATCAGGGTTCAGGTCCTTACTGGAAACTGCTGGTAACTGGTGGTTACCAGCAACCCTGGCCAGGAGCATTGTTTGCAAAAAATAGTGTGTTAAAAATTTTAAATCTAAACTATACCGTCACAATAGTAAGAGCATCAGAGTAAGCTATAAGTTACAAATAATTTACTAATTTACCTCAAAACCTTAAATTTTTTTCATCTCCGTCACCCTGCTGGTCTGCATTGCTCATAGAATAACTCTTTTTCTGGCAAGATGAGTGATACGATTGCCCATTTAGTTTAGCAAGAGTAGAATGGCTGCTACCAAGGTGGTTGAAAAGCTGCAAGTTACTTGGTTTATTTTAGGATTAGATGTTCCCCCTGTGGGAATTTCTAGTATTTTTCTTCTTCTGTCAATGCCATGGGAATTTTTAAACTTCTCTGCTGTATATTATTTTATCTGTCTGTGGCTGTAATTATGGTGGAAGCATCCTTTTGTTTTTTTTTTTCGGCCAAGTTGCATATCTTTCATCTTTATGTGTATTCTGACTAAACTATCCATGCTTTATACATAATAGTGATGAATGATATTAATCCGGTGGATCAAATTCATCCAGATTCACTTGATGATATAAAATTGGCAAGTCACAGTGACAACAGCAGGTTCAGATCAAAGGTGTGGGAGGAGTTTACGCCTGTATATGTTGAGGGGAGAATCCAGGGTGCTGAATGTCTCCATTGCCACAAGCGACTTAGTGCAGATAAAGGTAGAAGCCATTTGAACCGGCATACTCAGACTTGTCCGGCACGAGGAGAAACTGGAATAAATCATAAGAGTCCGTTTTCTCCCTCCAGTGCACCAAGTTTTAAATCTGGGGTTCAGGATGAGCTTTCACCTGCCTTGACAAACGGTAAAGTTCAGATTGCAGAGTATGCTAGCAAACTTCTCAAGGTTAATAGCTCAGTTGACAAAACTCCCCAGAGCCAGCACATTCTAGCTTTGCCAGCACGAGACAACATGACCAAAGAACAAAATACCTCATCTACTCATGCTGCTCCAGATGTAAGCACCAGTAAATTTGATCAGGAAACATCTTATCAAGAGCTAATTAGAATGATAGTTTTGCATGGATATCCCTTGTCAATCGTGGAACATGAAGAAATGAAAAGATTTGCAAAAAGCCTCAACCCGTTGTTTAACATGGCATCAAGCATTGATGTGGAAGAGTATTCAACTCTTTTATATCAGAAAGAAAAGGCTGACCTTAAGGAGAAAATTGCTGCACTTTCATCCCGACGGATTTCCTTATCAGCAAGCATTTGGGCTCCTCATGGAGCTGAGCCCACTGTGAAGTACATCTGTTTGACAGCGCACTTTATTGATGCAGAATGGAGGCTTCAAAGGAAAATAATCAAGTTTGGTGTGTTTTGGTCGTTGCCTACTGATTTGGAAAGAATGATACTTTATAAGGAGGCTTGTGTATTAGACTCTGAAAGTGGGCCATATAATGTCATAGCAGAAGCTATAAGTGATTGGAATCTTGATAATAAGCTTTTTAGCTTGATATCCGTCAGTGAAATTAGAAACCATGAAGGTACCACAAAGCTTAAGGACATGCTCATACAAAAAAATAGTCTTCCTATTAGAGGTGAGCTATACAATATTGCCTGTGTGGATGACGTGCTTAACAACATTGTTTCAAAAGGGCAATCAATGCTTCACCTTGTTGATAATATACTAGAAAGATTTATGCTGGCACATGCGTACTCATCGTTAACTCAACAGCAACTTTTTGAAGCTGTTACAAACATGGGTTTGAAGTGTCCCCAGGAAGACGCAAAATGGTGGCACAAAATTTACTTCAGGCTTGAAGTTGTTCTGCATTGCAAGAAGGCATTTCCATCTGAAGAGTTGTTATCTGCAGAAGACTATAAGGTCGTTGAGTCTATCTGCAAGATTCTGAGGGCTTTTTATCGTGCTATTGAAGTAATCTCTGGTCCTGTTTGCCCAACAGCAAATGTGTACTTCAATGAATTATGGAAAGTTAGAACAACTTTGCAAGAAGAAGCATCTACTGATCACACTGAAGTTGCTAGCATGGTGAGGGAGATGCAGGAAGCATTCCATGAATATTGGGAAAATTCATACCTATGGCTGTCAATACCTATAGTTCTTGATCCCAGATTCAAAATTACTTTTATTGAGTTCCGTCTTAAACGAGCTTTCGGTGCTGAAGCAGCAAAGTATGTAGCTGCTGTACGTGAAATAATCAGGGAGCTGTTTCATGAATATTGCGGCCCTGTGGATAAAGGTGTTCACACATCAAACAATGAAGCTCGTGATGTTGAAATGGATGGATTTGACAGTGATTCATTGGAGGATTGGGATCAGCATCTTAGTGCACAATCAAGGAGCCAACGGTTGTCAGAGCTTGACAATTATCTCGAGGATGGCCTTGTTCCAAGGAAAGATGATTTTGATATTCTGAACTGGTGGATGATTCATTCTACAAAGTATCCAACTCTTTCAGTTATGGCACAGGATGTCTTGGCAATGCCATCATCTGCTCTTCATTGCAAGGCCGCCTTCAGCAGTGAGGGTCCAGTAATTCATAAGCAATGGAGCACTTTGAACATCAAGACAATTGAGGCGCTTGTGTGTACCCAGGATTGGATTAGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028099