BGIOSGA028121

From RiceWiki
Revision as of 07:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028121| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028121, complete gene.| tag = P0610E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028121

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028121, complete gene.

LocusTag

P0610E02.33

Ensembl Transcript ID

BGIOSGA028121-TA

Ensembl Protein ID

BGIOSGA028121-PA

Length

3170

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5603963..5607132

Sequence Coding Region

5603963..5604227,5604419..5604792,5605275..5605805,5606719..5607132

Genome Context

<gbrowseImage1> name=IndicaChromosome08:5603963..5607132 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:5603963..5607132 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCTGCTGCTGCCGCTTACGGCGTCGGGGCTCCACTCAAGCTCGCTGCAAGGCGGCATGGGGCACTCGCGCTGGCCGGTAGCCATCGCTGCAGTGGATGGAAGTCTTCAGTGTCTTGCCCTGTTCCTCAGGCTTGGATGGGCAGTTGCTCTTCTGTCGCAATGCGCCGTGTCGCCTCCGGTTCTCGATTGATTGTTCAGGCTTCAAACAGCGGGGGCTCAAGCTTGAAGGCATCATTGGCTGATGCTAGCCTGCTTACTGAAGAGAGGATAACTGTTTTGGTGATTGGAGGTGGAGGAAGGGAGCACGCTCTCTGTTACGCCTTGAATCGCTCTCCGTCTTGTGATGCGGTCCTATGCGCCCCTGGGAACGCAGGTATTGCTCAATCTGGAGATGCGACCTGTATATCGGACTTAGACGTCTCCGATAGCGATGCCGTTATCGCGTTCTGCTGCAAGAGGGGAGTGGGAATGGTTGTAGTAGGTCCTGAAGCTCCTCTTGTTGCCGGTCTTGTGAATGACCTTGTGAAAGCTGAGATACCAGCATTTGGTCCTTCCTCAGAAGCTGCGGCTTTAGAAGGATCGAAGGACTTTATGAAGAAATTATGTGATAAGTACAATATTCCTACAGCTAAGTATCGCACATTCACAGATCCTGCAGAAGCTAAACAATATGTCAAAGATCAAGGCGCCCCTATTGTTGTCAAAGCTGATGGATTGGCAGCTGGAAAAGGCGTGGTTGTTGCTATGACTTTGGATGAGGCATTTGAAGCCATAGACTCTATGCTGGTTCAAGGGTCATTTGGTTCTGCTGGTTCACGGGTTATCATTGAAGAATATCTGGAGGGTGAAGAAGCCTCTTTCTTTGCATTAGTGGATGGTGAAAATGCATTGCCACTTGAATCGGCACAAGATCACAAAAGGGTTGGTGATGGTGATGTAGGCCCAAATACTGGTGGTATGGGTGCATATTCCCCTGCACCAATAGTGACAGAAGAGCTTAAGCACACAATTATGGATAGTATAATAATCCCAACAGTTCAAGGTATGGCAGCTGAAGGATGCAAGTTTGTTGGTGTATTATATGCTGGACTTATGATTGAGAAGAAATCTGGTCTGCCTAAGCTTATCGAGTACAACGTACGATTCGGTGACCCAGAATGCCAGGTTCTTATGATGCGATTAGAATCCGATCTAGCACAGGTTCTGATGTCTGCGTGCAGAGGGGAACTGGGCGATGTTTCACTAACCTGGTCACCTGAAATGGCAATGGTGGTTGTGATGGCAAGCGAAGGATACCCCGGATCTTATAAGAAGGGGACTGTAATAAGAAATCTCGAGAAGGCCGAGCAGGTCTCGCCCGCGGTAAAAATATTCCATGCTGGAACAGCACTGGATGGGGATGGAAATCTTGTCGCTGTCGGAGGCCGGGTGCTCGGGATCACGGCTAAGGGCAAAGACATCGAGGAAGCACGGGCAAGAGCATATGATGCAGTAGATGTTGTTGACTGGCCTGAAGGATTCTTCAGGCGCGATATTGGTTGGAGAGCACTGAAGCACAAGCAAGTGGCCAATTACTGA</cdnaseq>

Protein Sequence

<aaseq>MASAAAAYGVGAPLKLAARRHGALALAGSHRCSGWKSSVSCPVPQAWMGSCSSVAMRRVASGSRLIVQASNSGGSSLKASLADASLLTEERITVLVIGGGGREHALCYALNRSPSCDAVLCAPGNAGIAQSGDATCISDLDVSDSDAVIAFCCKRGVGMVVVGPEAPLVAGLVNDLVKAEIPAFGPSSEAAALEGSKDFMKKLCDKYNIPTAKYRTFTDPAEAKQYVKDQGAPIVVKADGLAAGKGVVVAMTLDEAFEAIDSMLVQGSFGSAGSRVIIEEYLEGEEASFFALVDGENALPLESAQDHKRVGDGDVGPNTGGMGAYSPAPIVTEELKHTIMDSIIIPTVQGMAAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVLMMRLESDLAQVLMSACRGELGDVSLTWSPEMAMVVVMASEGYPGSYKKGTVIRNLEKAEQVSPAVKIFHAGTALDGDGNLVAVGGRVLGITAKGKDIEEARARAYDAVDVVDWPEGFFRRDIGWRALKHKQVANY</aaseq>

Gene Sequence

<dnaseqindica>1..265#457..830#1313..1843#2757..3170#ATGGCGTCTGCTGCTGCCGCTTACGGCGTCGGGGCTCCACTCAAGCTCGCTGCAAGGCGGCATGGGGCACTCGCGCTGGCCGGTAGCCATCGCTGCAGTGGATGGAAGTCTTCAGTGTCTTGCCCTGTTCCTCAGGCTTGGATGGGCAGTTGCTCTTCTGTCGCAATGCGCCGTGTCGCCTCCGGTTCTCGATTGATTGTTCAGGCTTCAAACAGCGGGGGCTCAAGCTTGAAGGCATCATTGGCTGATGCTAGCCTGCTTACTGGTAAAGTAGTATTAGATTAGCTCAGCTTATTTTGTTCTTTCTTCAGGTGGTTTATGTTTATGGAAAAGAAAAATCCAAAGTCCCAATGCGCTATGAGATGAAACTTTGTTGTTGAGTTAGTCGAGAGAACTTGTTATTAGATGCAAAGTCTGGGGCAATGGTTTAATTTCCTGTTTCCTGTTTCATTTCAGAAGAGAGGATAACTGTTTTGGTGATTGGAGGTGGAGGAAGGGAGCACGCTCTCTGTTACGCCTTGAATCGCTCTCCGTCTTGTGATGCGGTCCTATGCGCCCCTGGGAACGCAGGTATTGCTCAATCTGGAGATGCGACCTGTATATCGGACTTAGACGTCTCCGATAGCGATGCCGTTATCGCGTTCTGCTGCAAGAGGGGAGTGGGAATGGTTGTAGTAGGTCCTGAAGCTCCTCTTGTTGCCGGTCTTGTGAATGACCTTGTGAAAGCTGAGATACCAGCATTTGGTCCTTCCTCAGAAGCTGCGGCTTTAGAAGGATCGAAGGACTTTATGAAGAAATTATGTGATAAGTACAATATTCCTACAGCTAAGGTACATTCTTTTTACATTAGTTTTCAGCCCTATAAGTGTAATCTTTCTGGGACAATGAACATTTGCTCCGATGAGAGTACGGGGTGCCTAAATTTGGTTGATGTGATATCCATGTTTAAGAAAGAACCAAAGATGCATCATTTCAGGCATAATTGTACTGATATTTCCTTTGTATTGTTACAAGGTTGCTAACCAAGTTCATATTTGACTTGCTTGATAGTATATCAGTTATAGACAATATAAGTAATCATCTCAGAGTTAATGATATATCTTCAGCTTTCTAGGTGAACTGTACTTAAGCATTGCCCATATGTCCTGAAATTTCCCTTGGGATTGCCTGAGTTTTGAAATAAAGTCATTGTGTTGTACTGTAAACGTTCTAGAAAAGATAGGGAAAAACAGAGCTCCTCTACATAAGTCTATATGTATAATTTGAGATGTTAATAATAATGGTAACATAAGTGCTTATATTTCTTTTATAGTATCGCACATTCACAGATCCTGCAGAAGCTAAACAATATGTCAAAGATCAAGGCGCCCCTATTGTTGTCAAAGCTGATGGATTGGCAGCTGGAAAAGGCGTGGTTGTTGCTATGACTTTGGATGAGGCATTTGAAGCCATAGACTCTATGCTGGTTCAAGGGTCATTTGGTTCTGCTGGTTCACGGGTTATCATTGAAGAATATCTGGAGGGTGAAGAAGCCTCTTTCTTTGCATTAGTGGATGGTGAAAATGCATTGCCACTTGAATCGGCACAAGATCACAAAAGGGTTGGTGATGGTGATGTAGGCCCAAATACTGGTGGTATGGGTGCATATTCCCCTGCACCAATAGTGACAGAAGAGCTTAAGCACACAATTATGGATAGTATAATAATCCCAACAGTTCAAGGTATGGCAGCTGAAGGATGCAAGTTTGTTGGTGTATTATATGCTGGACTTATGATTGAGAAGAAATCTGGTCTGCCTAAGCTTATCGAGTACAACGTACGATTCGGTGACCCAGAATGCCAGGTTAGTGATTCTCTATCTATAAACTCTAACCTTCAATGATGCACTATCTATTAGGAAACTATGTATATCTATTATAATTTAGATTTTGGTTTATCTGATCATGCTTTGGCCAGGTGTTCTTGTTGGACATTATAGTAAAACACAATTGCATGACTATTTTGGATTCTGGTTCCTCTGATCCACTATGGCTAAGATGTTCTTGTTGGACAATAGAATGAAACAAACATGCGTGTCTTATCATCAGAATTTTTCTCGTTCTACAGTTTTGACACCCTGGTCTGCATCTAGCAGGTCAAACTCTACAGGGGGTCTAGTAAGAAGCTGAGTAGATTTCATTCCTGTAGTGCAATGAGTGGTGCATTTTTGTGTCATTTTAGTGATGGTCAAATTTCAAATTTTATCTACTTTTGCATATTTGTTAGTGATGGCCAACCGTTTGATGTATGAAATTTTCGAATTTATACCAGTGCAGATTAAACAATTCTGACTGGCTACTAAAATGTTTATCTTTGAAGTAAAATTGCTTTTAGAGTATAGACTTTTAAAATTATGCATATTATTGGCAAATAACAAAGGCAAAATGTTAAAATCATGAAGATTGTCAATTGAAAAGGTATATTATATTTTTATGGCCAGAGGTAGTAGTTGTTTATCTCAGCCTGAATTGTTCATCCAGCATCTGGCCCAATTATCCAAGATTCCCTTGTGGGCTGCATTTTCGTGAATAGATTGATAGTCCTGTGGCATATTCGTTCTGCTTGTCTGGTACGTATCCCACCTATAGATTTTCCAGATAAGATCGGGTTTTTGTTCTTTTGCTGCTAAGCAATCTAGTTGAACTGTTCACTATTTTTACCATCAAATTTCGATTATACTTTTCTCTACTGATATATACTTCTTTTTTGCACCTCAGGTTCTTATGATGCGATTAGAATCCGATCTAGCACAGGTTCTGATGTCTGCGTGCAGAGGGGAACTGGGCGATGTTTCACTAACCTGGTCACCTGAAATGGCAATGGTGGTTGTGATGGCAAGCGAAGGATACCCCGGATCTTATAAGAAGGGGACTGTAATAAGAAATCTCGAGAAGGCCGAGCAGGTCTCGCCCGCGGTAAAAATATTCCATGCTGGAACAGCACTGGATGGGGATGGAAATCTTGTCGCTGTCGGAGGCCGGGTGCTCGGGATCACGGCTAAGGGCAAAGACATCGAGGAAGCACGGGCAAGAGCATATGATGCAGTAGATGTTGTTGACTGGCCTGAAGGATTCTTCAGGCGCGATATTGGTTGGAGAGCACTGAAGCACAAGCAAGTGGCCAATTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028121