BGIOSGA028125

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Revision as of 07:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028125| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028125, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA028125

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028125, complete gene.

LocusTag

OSJNBA0056O06.11

Ensembl Transcript ID

BGIOSGA028125-TA

Ensembl Protein ID

BGIOSGA028125-PA

Length

4159

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5646617..5650775

Sequence Coding Region

5646617..5646678,5647348..5647666,5647803..5648093,5648947..5649195,5649270..5649394
,5649913..5650011,5650094..5650775

Genome Context

<gbrowseImage1> name=IndicaChromosome08:5646617..5650775 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:5646617..5650775 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGGCGGCGGCGATTGGAGGGGCGCGGTCCCCGCTCTCCTTCTCCTCCAGCCTCTGCAATGCAAAAGTATCCTGTGGTTTAGCTCTTCACAATGTGAAGATCAAGAGCAGTCGAAGGCTTGAGGTGGTTTGCCATGGAATGTTGACAACCAGAAAGTTCATGCAGAAGAAGAAGAAAGAGGAGGTATATAAGGATGCTGCTGATGAAGCAGAGCAGAAGAATTGGAGGATGATGATGAGGGAGATAGAAGAGTCAGGATCAGCTGTCTCCATTCTGAAGACTCAGCGAAGCAAGAAAGAACCACTGCCAAGGGATGCTGTTCTTGGAACTCTTATGCGGTTCAAACAGCTCAAGAAATGGAACCTGGTCAGCGAGATTCTTGAATGGCTACGCACACAACATTGGTGGAACTTCAGTGAGATGGACTTTTTGATGCTTGTTACGGCCTATGGAAAATTAGGAGATTTTAGCAGAGCGGAGAGGGTCCTGAAGTATATGAACAAGAAAGGTTACAAACCAAGCGTGATATCTCAGACTGCACTGATGGAAGCATATGGAAGAGCCAAGCAGTATCGTAAGGCTGAAGCAGTGTTTCGCAGGATGCAAACGTCAGGCCCTGAGCCATCAGCTGTGACATATCAAATCATTTTGAAATCTTTTGTTGAGGGTGACAAATACAAGGAAGCTGAAGCTATTTTTGAGGACCTTCTTAATGAGAAAAGAGCTTCTTTTAAGCCTGACCAGAAGATGTTTCATATGATGATTTATATGTACAAGAAAGCTGGCGACTATGCCCAGGCTCGGAAACTATTTGCTCAGATGTCAGAGAGAGGAATCCCTCTATCAACAGTCACCTTTAATAGTTTGATGTCATTTGAAACAGATTACAAGGAAGTTTCAAATATTTATGATCAGATGCAAAGAACTGCGCTAAAACCAGATGTTGTGAGCTACTCCCTGCTCATCAAAGCTTATGGAAAAGCTAGAAGGGAAGAAGAAGCATTAGCAGTTTTTGAAGAGATGCTTGATGCAGGAGTCAGGCCAACACGCAAGTCGTATAACATTTTGATTGATGCATTTGCAATATCTGGATTGGTAGAAGAAGCTCATACAGTTTTCAAGGCCATGAGAAGACACAGGGTTGAGCCTGATCTCTGTTCTTACACAACAATGGTCTTAGCTTATGTGAATGCTTCTGACATGGATGGGGCTGAGAAATTCTTCCGCCGGATTAAAGAGGACGGTTTGAAGCCAAATGTTGTTGTTTATGGAACTTTGATGAAGGGCTACTCGAAATTAAATAATGTTGAGAGAGTAATGAGAGTGTACGAGAGAATGCGGATGCAGGGTGTTGAACCCAATCAGACTATTTATACTACCATCATGGATGTGCATGGAAGGAACTCTGATTTTGGAAATGCTGTCATCTGGTTCAAAGAAATGGAGGCTCGTGGGTACCCAGCAGACAAGAAAGCAAAGAATATCCTTCTTTCTCTTGCCAAAACTCCTGAAGAACAAGAAGAAGCGAATGAATTGACAGGGAATTGTGCAATTCAGCTGGAAGCAAAACCCGATGGAACAACATATGGTTTAGAAATAAATGGTACTGGAAATGAGTATAAACATGGACAAAATGATGCTGGGCATGACAGTTTGTTAGATGGCGCATGCACCACAAGTAATCGAAATGGTAAAGTCGAGGCTGGGAAAGGTCATTTTGAGGAGGTTAATGACGATGATGATGATGATGACGATGATTACGATGAAGAGTTAAATTTTGTTTCTTTCAAAGATAAGCGAGAACTAAATTTTGCCACTTGA</cdnaseq>

Protein Sequence

<aaseq>MEAAAAIGGARSPLSFSSSLCNAKVSCGLALHNVKIKSSRRLEVVCHGMLTTRKFMQKKKKEEVYKDAADEAEQKNWRMMMREIEESGSAVSILKTQRSKKEPLPRDAVLGTLMRFKQLKKWNLVSEILEWLRTQHWWNFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQTSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETDYKEVSNIYDQMQRTALKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEMEARGYPADKKAKNILLSLAKTPEEQEEANELTGNCAIQLEAKPDGTTYGLEINGTGNEYKHGQNDAGHDSLLDGACTTSNRNGKVEAGKGHFEEVNDDDDDDDDDYDEELNFVSFKDKRELNFAT</aaseq>

Gene Sequence

<dnaseqindica>1..62#732..1050#1187..1477#2331..2579#2654..2778#3297..3395#3478..4159#ATGGAGGCGGCGGCGGCGATTGGAGGGGCGCGGTCCCCGCTCTCCTTCTCCTCCAGCCTCTGGTAAGCGCGCGCGCGCCCTCCTCCTCCTCCTCTCGCAGTAGCTCCCACTAGGCTCGCGCGGCGGCGCGGCGACTCGTGTTGAATTAGGGGGTTGGAGGTGGGGCTTTGGTGGGTTTGGGAGCTCGAATTTATGGGTAATGAGGTTTTTGTGCTGTGGTTTGCGGCAATTTCGGAAGAGGGTTTGGTGGATAAGGTCCCTGGGGATTTTTCTGTGGGCATCGTGGAGAGTGTGTGTGGTTATGTGATGTCCATTCAGGGTTGTTATCGCTAGGTTGTAAGTCTTTGGGTTCAATATGCTCCATTGCTCCAATATGTCATTTGATTTGAGGAAGCCGGTAAGCTTCGGTTTCTTCAAGCCTGTTTTGGCATGGTGGCAGTTAGTGATCACGACATGTGACGGTATCGTGTGAATTGGGGTAAAGAATAAGGGGAAAGCATAACCTTTGGTTATTGAGCACGAGAGATAGCCTGTTATTGTACAAGTAACTCGATAGATTTACATCATTTCTTACTTGCTCAACATCAGTAAATTTGTTGTAGTCCACTTGTCTATAGTTGTCTATGTGATAGTATGACTTTTGTTGTGTTGCCTTTTCTTTTCATTTCGTTTTCTCACTTGATGACTGTTTCCTTGTATGACTCCGTTTGAAATATCTTTTATGCTGTCAGCAATGCAAAAGTATCCTGTGGTTTAGCTCTTCACAATGTGAAGATCAAGAGCAGTCGAAGGCTTGAGGTGGTTTGCCATGGAATGTTGACAACCAGAAAGTTCATGCAGAAGAAGAAGAAAGAGGAGGTATATAAGGATGCTGCTGATGAAGCAGAGCAGAAGAATTGGAGGATGATGATGAGGGAGATAGAAGAGTCAGGATCAGCTGTCTCCATTCTGAAGACTCAGCGAAGCAAGAAAGAACCACTGCCAAGGGATGCTGTTCTTGGAACTCTTATGCGGTTCAAACAGCTCAAGAAATGGAACCTGGTCAGCGAGGTATATTCTCTTGCAGCATATTATCCAATATGAAGCCGTCCTGTTGACTAACTAGCTAGCTGCTATTGTTTCATCTACAATAGAATGTGATTTGAAGAGTTCATAAATATTTGAATTTCTATGCCTCATTTTTCAGATTCTTGAATGGCTACGCACACAACATTGGTGGAACTTCAGTGAGATGGACTTTTTGATGCTTGTTACGGCCTATGGAAAATTAGGAGATTTTAGCAGAGCGGAGAGGGTCCTGAAGTATATGAACAAGAAAGGTTACAAACCAAGCGTGATATCTCAGACTGCACTGATGGAAGCATATGGAAGAGCCAAGCAGTATCGTAAGGCTGAAGCAGTGTTTCGCAGGATGCAAACGTCAGGCCCTGAGCCATCAGCTGTGACATATCAAATCATTTTGAAATCTTTTGTTGAGGTGAGCATTTAATCTACCTTGCCATCCAATCTAAAGTCTTGTGATTTAGCCAGTGAAACACATGAGAATGTAGGACCATATATAATCATTAATCTTTTGTCAGATCGAATGTTAACAAGTCAGTCTACTATGATTTATCATAAGACATGAAACTTTAACATTTTTGTTTGATAAATGTTTACAATTTAGTGAACTCTTTTTGGTGTAACCTCAAGGAGTACCTGGCAGCAGGTGGTTGGTTACTTGGTTGGGGGGCATAATATGATTCCCCCCCCCCCCCCCCCAAGGAGGCACACCATATAAATAAACACACTCACTGAAGCTTTTTCACAATAATGTTGTGTTTCAGACTTCCTGTGCATAGTATAGTTGGCATTTACGGATTTACTTGCATGCTTGCCTTGTCTCATGTGTCCTTGGTGTGGGCGTAAGAGCTCTGAATTTTATATGGTGTACATGCACCAATCCTGTAGAGAATTCATCTGTACATGCTCCAATCAAATGATCACCAATCCTGTAGAGATCTCATGTGTACATGCTCAAAATCAGATAGATTTGTGATATGCTATAGTGTCTCGACCATAAATGTCATTTTCTGCAAAAGTCACTTGTTGCTCTGATCCCATCCTGTTGCACACTCCAAGCATCGATAGTTCCTGGTGCCTCTTTGCTGACATCTCATTGAATCCTTTATAAATTATTTATCTCTTGTATTCTGGTCATTGCCCTAAATACTGCTCCACGGTCGTTTCAACTTATCTTAGACACAAACAAAATTATTTGTTATGATTATAGCATCTCCCTTAATTCCTCTACATTTGTCCATAACAATTGTGCTGGTGGTTGCTGACAGGGTGACAAATACAAGGAAGCTGAAGCTATTTTTGAGGACCTTCTTAATGAGAAAAGAGCTTCTTTTAAGCCTGACCAGAAGATGTTTCATATGATGATTTATATGTACAAGAAAGCTGGCGACTATGCCCAGGCTCGGAAACTATTTGCTCAGATGTCAGAGAGAGGAATCCCTCTATCAACAGTCACCTTTAATAGTTTGATGTCATTTGAAACAGATTACAAGGAAGTTTCAAATATTTATGATCAGGTACATCCCCAGCTTAAGTGCACAATCAAGTATATCTATATTTTTTGTTCCTTTAACGAATTCTATAACTTTAGATGCAAAGAACTGCGCTAAAACCAGATGTTGTGAGCTACTCCCTGCTCATCAAAGCTTATGGAAAAGCTAGAAGGGAAGAAGAAGCATTAGCAGTTTTTGAAGAGATGCTTGATGCAGGAGTCAGGTTCAATCTCCTTCAAATATTTTCTTGGGTTGATACAATTTAAGCATTGATCCCTTTGTTGGACTCCCTGTAATCATGAACATAGTTTTTGGCCAAATTGGTTAAAGCCTTAATGTTTAAGCTGTGAGCTCTAAGGACATCTGTTAGCCATGTGAAGTTTCAGATAACAGTGTTTTGATCTGATCATACTTTTAGCAACATATTTCTCTCATTCTTTTTTGTGTTAAGTGAAAATATGCCACTCGTAAGCACATTAAATAGTTTTTTGCTATGTACCAATGACATGCTATGTGATGCATTAGCAATTCATGTCAAGCAATGTGCCATCAAAATTTTTGTAACCAAAGGGAACTAGTTTGTATTTTCTTTTCCATGAAAGCAAGTCAATACTCTGTTACATCCACAACTTAGAAAAAAAAACAACTTTTGACAAAGAATATCTGCTTGAGATCAGTATTTTTCTGTAAAAGATATTCCAAAACATTCTAATGGTGGTCAATTTGATGTTAACTTTCCAGGCCAACACGCAAGTCGTATAACATTTTGATTGATGCATTTGCAATATCTGGATTGGTAGAAGAAGCTCATACAGTTTTCAAGGCCATGAGAAGACACAGGTACAAATTTTATCTGTCGACTTAAATTTCAAGACTAATTGAACTGTAGGTTTCTCACCTTAACACATTTTTTGCTTTGCAGGGTTGAGCCTGATCTCTGTTCTTACACAACAATGGTCTTAGCTTATGTGAATGCTTCTGACATGGATGGGGCTGAGAAATTCTTCCGCCGGATTAAAGAGGACGGTTTGAAGCCAAATGTTGTTGTTTATGGAACTTTGATGAAGGGCTACTCGAAATTAAATAATGTTGAGAGAGTAATGAGAGTGTACGAGAGAATGCGGATGCAGGGTGTTGAACCCAATCAGACTATTTATACTACCATCATGGATGTGCATGGAAGGAACTCTGATTTTGGAAATGCTGTCATCTGGTTCAAAGAAATGGAGGCTCGTGGGTACCCAGCAGACAAGAAAGCAAAGAATATCCTTCTTTCTCTTGCCAAAACTCCTGAAGAACAAGAAGAAGCGAATGAATTGACAGGGAATTGTGCAATTCAGCTGGAAGCAAAACCCGATGGAACAACATATGGTTTAGAAATAAATGGTACTGGAAATGAGTATAAACATGGACAAAATGATGCTGGGCATGACAGTTTGTTAGATGGCGCATGCACCACAAGTAATCGAAATGGTAAAGTCGAGGCTGGGAAAGGTCATTTTGAGGAGGTTAATGACGATGATGATGATGATGACGATGATTACGATGAAGAGTTAAATTTTGTTTCTTTCAAAGATAAGCGAGAACTAAATTTTGCCACTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028125