BGIOSGA028156

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Revision as of 07:54, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028156| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028156, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA028156

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028156, complete gene.

LocusTag

OSJNBB0094P23.28

Ensembl Transcript ID

BGIOSGA028156-TA

Ensembl Protein ID

BGIOSGA028156-PA

Length

4678

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:6100443..6105120

Sequence Coding Region

6100443..6100529,6101431..6101598,6101681..6101804,6102018..6102109,6102194..6102292
,6102416..6102529,6103131..6103195,6103283..6103399,6103812..6103887
,6104445..6104537,6104882..6104932,6105022..6105120

Genome Context

<gbrowseImage1> name=IndicaChromosome08:6100443..6105120 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:6100443..6105120 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCCCAAGGCGTCCAAGAAGGACGCCGCCCCCGCCGAGCGCCCCATCCTCGGCCGCTTCTCCTCCCACCTCAAGATCGGGATCGTTGGGTTACCAAATGTTGGCAAATCCACTTTCTTTAACATAGTAACAAAGCTGTCTATCCCAGCTGAGAACTTCCCTTTCTGTACCATCGACCCAAATGAGGCACGGGTATATGTTCCAGATGAGAGATTTGATTGGCTTTGTCAACTTTACAAGCCAAAGAGTGAGGTGTCTGCATATCTAGAAATCAATGACATAGCCGGGCTTGTTAGAGGAGCCCATGCTGGGGAGGGTTTGGGCAATGCCTTCCTATCCCATATACGCGCTGTTGATGGAATTTTTCATGTATTGAGAGCATTTGAAGACAAAGAAGTTACTCATATTGATGATTCAGTGGATCCTGTTAGAGATTTGGAAACTATTGGTGAAGAGCTGAGACTCAAGGACATTGAGTTTGTGCAGAACAAAATTGATGACCTTGAGAAATCAATGAAGAGAAGCAATGATAAGCAGCTGAAACTCGAGCATGAATTATGTGAGAAGGTCAAAGCCCATCTTGAAGATGGAAAGGATGTCCGCTTTGGAGATTGGAAAAGTGCTGACATTGAGATCTTGAATACCTTCCAGCTACTTACAGCTAAGCCAGTTGTCTATTTGGTGAACATGAGTGAGAAGGACTACCAGAGGAAAAAGAACAAGTTCCTACCTAAGATACATGCCTGGGTTCAGGAACATGGTGGTGAAACTATTATTCCTTTTAGCTGTGCTTTTGAAAGGTTGCTAGCGGATATGCCCCCGGATGAAGCTGCTAAATATTGTGCTGAAAACCAGATTGCAAGTGTGATCCCAAAAATTATCAAGACTGGTTTTGCTGCAATCCATCTTATATACTTTTTCACTGCTGGCCCTGACGAGGTAAAGTGTTGGCAGATCAGACGTCAAACTAAAGCACCTCAAGCTGCTGGTACAATTCACACTGATTTTGAGAGAGGCTTCATATGCGCTGAGGTAATGAAGTTCGACGATCTAAAAGAACTAGGTAGTGAATCTGCTGTGAAGGCTGCTGGAAAATACAGGCAGGAAGGGAAGACCTACGTGGTACAGGACGCGGATATCATCTTCTTTAAATTTAACGTGTCTGGAGGTGGAAAGAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MPPKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHLEDGKDVRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKKNKFLPKIHAWVQEHGGETIIPFSCAFERLLADMPPDEAAKYCAENQIASVIPKIIKTGFAAIHLIYFFTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERGFICAEVMKFDDLKELGSESAVKAAGKYRQEGKTYVVQDADIIFFKFNVSGGGKK</aaseq>

Gene Sequence

<dnaseqindica>1..87#989..1156#1239..1362#1576..1667#1752..1850#1974..2087#2689..2753#2841..2957#3370..3445#4003..4095#4440..4490#4580..4678#ATGCCGCCCAAGGCGTCCAAGAAGGACGCCGCCCCCGCCGAGCGCCCCATCCTCGGCCGCTTCTCCTCCCACCTCAAGATCGGGATCGTACGACCCTCAATTCCCCACCGCTATATCTCTACTCTCCTTTGCTTCGCCGTCACGCGACGACCGCGGGTGCCTGCCCGGGGGCCAGTGGATCTCGCGGCTTTGCTGTCATGCGATGTGGATAGTAGATTGATTGTAGTTTGTGCAGGATTCGCGTGTGCAGCAGCTACTACGGTGGATACATCGGAGCTTAGTGCTTGGGGTTGGGGGAGATATGTGCTTTGGTTTTCGGGGTAGTAGAACGGAGCGTGTGCCCAGCTCGAGGCCGTGATTTTAGTAGGGTTTTGTCCCCTTGGTGGTCAGTGTGGGGTTTGGTTGGTGCTTAGGTTTTTGATTCATGTTCCGCTGCTTTGTGCTTATGTGGATGTGATTTGAATCTAACTTTAGTGGGTAACCCGGTGTTCTTAATTTGGCGAAGCATTCTATATAAGAACGATCTACGCCATATCTTTATGCATGAATGTTTAGACGATCTCCTGTTACCTTTGTGTACTTTTTTCCTGCTGGAAGCATGATAGCCCATGGTAGATACCTGTACATTCCTATTCATTAGTTCTTCCCAATTGATCGCCTTTGGTGGTGCTAATAGTGATAGTATGATATTGTCATATTGCTCAACACACCTGCTACTGATGAATGATTATGTATAAGCATTTGCTTTTAACTTGTATACCATCACGGGTTCATAATGCAATATTTGTTATTGGATTTGTTCATTGTTTCATCAATATTTGGATCAGCAAATGATTTGATCATTAGTTATTCTGTGCAGAGATGCTTTTCCAACTTTACAGCGAAGCATATAATTACCAATAATCCCATTTTTACCCTTTTGATTTATCCTAGTTTTCTCATCAGTTATAAAGACTTATGAATTTCTTTGTATTTATTTTCTCTGCAGGTTGGGTTACCAAATGTTGGCAAATCCACTTTCTTTAACATAGTAACAAAGCTGTCTATCCCAGCTGAGAACTTCCCTTTCTGTACCATCGACCCAAATGAGGCACGGGTATATGTTCCAGATGAGAGATTTGATTGGCTTTGTCAACTTTACAAGCCAAAGAGTGAGGTTTGTTTCTTTCCTACACTATAATGTGCAACTTCTTTTCTTATGTTTCAAGACATATCATGTCTTCTGAATTTCTTTGCAGGTGTCTGCATATCTAGAAATCAATGACATAGCCGGGCTTGTTAGAGGAGCCCATGCTGGGGAGGGTTTGGGCAATGCCTTCCTATCCCATATACGCGCTGTTGATGGAATTTTTCATGTATTGAGTATGTTCCTGTTACTTATCATTTTGATTGGATCTTGCATATTGAGTGTGTAGTCATGGACTCGTGCTATTGTTTCAGTGTGAAGCAAAGTAAACGTTGTGATTGTTCTAGTGAAAGCATTGGTGCTCAGATTCGAATCAATTTTCTTTGCTTTTTTGTTTAACCAGTAATCACAAGGTCATGCACTTCATGAATGCTGCTTATGTTTATCAGGAGCATTTGAAGACAAAGAAGTTACTCATATTGATGATTCAGTGGATCCTGTTAGAGATTTGGAAACTATTGGTGAAGAGCTGAGACTCAAGGTTTTTATAGGGATGCTTGATTTGCACGTCAGTAAATGCTTTGGTTAAACCTTCTTTTAAATCCTATCGCACTTTCTTTTGCAGGACATTGAGTTTGTGCAGAACAAAATTGATGACCTTGAGAAATCAATGAAGAGAAGCAATGATAAGCAGCTGAAACTCGAGCATGAATTATGTGAGAAGGTGGGGCACCTGTTACAGCCAACCTCTGTGTTGCTAAATTTGTCTGTTAGCAGCCTTGCATAATTTCAAATTGTTATTTTCTTGAGTGAGTGGAAGCTTACTTTTGGCTTCTCTTCCTAACAGGTCAAAGCCCATCTTGAAGATGGAAAGGATGTCCGCTTTGGAGATTGGAAAAGTGCTGACATTGAGATCTTGAATACCTTCCAGCTACTTACAGCTAAGCCAGTTGTCTATTTGGTACGTATTTTTGTCATCTGTATGCCAGTTTATTTGAGATGTTATAAAGTAGTTTTCATGATGAGGTGTTCAGTTGTTCTTTGTGAGATTTCAGTTTTGTTATTTTCGTGCTTCTGCATTTAGAGACTCAGTAATAATGTCAGTACGTTGATTCATGGCTATACATGCTTTTGAATTTATACAATAGTGCCCATGAATAGCGCATATTGTTTTCTATTAGCAAGTTAAACTTGGAATAGTGCAAAACTTATCCTGTGGACTTTCTGTTGTGCCCTGTTTGTCTGTTTCAGTCTTCCTCCTATTATGTAATGTTTATTTGGAGGCATCAAGCAATATTCTGAAGCAGTGAATAATACTTTCTTGTTTTATGTATGGGAACTCTACCTATATATCATTTTCAGAGCACACAATCAACTATAACCCAAATAGTCACTAATCGTGTAATTAGCTGTATACCCACCTAACCTAACATGGATATTTTAGTTGACCTGTCAGAAATTGAAAGGGAGATGCTAGTATGTTACCTTTCCTTGCATATGGTAATTTTTTTTTTTAAAAAAGTAGAGCTATATATTGTTTAATGACTGTTTTGTTTTTGCAGGTGAACATGAGTGAGAAGGACTACCAGAGGAAAAAGAACAAGTTCCTACCTAAGATACATGCCTGGTATTGTTCTCTAGTATATAGTAACTATTTCTTGAAGGGATTAAGGTGTAATGGAAAATAAGGCAAACTGTTGTTTTTTATTTTCAGGGTTCAGGAACATGGTGGTGAAACTATTATTCCTTTTAGCTGTGCTTTTGAAAGGTTGCTAGCGGATATGCCCCCGGATGAAGCTGCTAAATATTGTGCTGAAAACCAGATTGCAAGGCAAGCCATGTCACACTCATATACCATTAAATGTTCTTTATGTGTTTAGCTTAGTTCCAAAAAAACCAAAGGTAAATTGCTTGATTTGGAATCAAGCAAATCAAGCAATACTGTCACACTCATATATGAGTCCTTTTACTTGGATTTTATTTCCTGAGTGACGCAATACTGATGCCTATTTTTTGGTTGGGTCACTACGTGTCTTTGACGGTGAATTCCATTTGGTCATACTTTCTATAAGATACATTATATGACTATGATTCTATAAACACCAATAGAACTATCAAACCAGCAAGAGTCTTTTTAGTTGCATGTTGTTTACCATATATTGTAGCTTCTTTTTTATATGATTCAACATTTCTGATCTGTCATTAGTTGCTTGTCCTTAAGCATTCTCTATTTTTTGCTGCAGTGTGATCCCAAAAATTATCAAGACTGGTTTTGCTGCAATCCATCTTATATACTTTTTCACTGCTGGCCCTGACGAGGTATATTTTTTCTGGTCATATTATGCTTATCTTACACTATTACTTGTTGATTTTAATATAATCCATCTTTTACTTCCCATGTTGCTATATGACAGTAGCATTGCCCTTTTAACAATTGTGTTGTGCAATTTGCTGCACTTTGTTTTAAGTAATACGCAGTAATCCCTCCTACAAAAGTTATACATATTACTTTTACCACCATGACCAAGGAGAAATTAAACTCATCTTGCATGTAACAAAGATAAGGAGTGTATGCACGCATGCAACCAATGAGTATTAAGATGGCTCCTCGGGTTTTGATCAAACATTTAATTTACCTATCCATTTAAATCTTGGATGCATACACACTACAAATAGGAACAACTTATTTGGGAAAACTAAAATATGAAATAGGTCTAATTCTTGTGGATGGAGTACTTTCTTTAGTTCTTATTTTTTATGTTCTTAATAGTTCAAATGCAAGCGATGTGAAAATTTTAGTTTTATACATTCTTGTTTAAATATATGTTTGAAATACATTTTGCTGGATTAGTGACATAGATGGATTTTCTGTTCAGGTAAAGTGTTGGCAGATCAGACGTCAAACTAAAGCACCTCAAGCTGCTGGTACAATTCACACTGATTTTGAGAGAGGCTTCATATGCGCTGAGGTACTCATGCGATATACTCAGGCTTCATATGAGTAGTTAGTATATGCATGCTAATGTGGTTAGATATTATTGCAAACAATTGATCTCATGTCACTGTTAAGTAGCTGGTCTAATTCACTAGTTATACTATTTTGTACAGTTATCCCCAACTCCGCAGTACTCAATGGACACATTGATTTAGATGTTTTCTGATGCGACTTTTCTAGTTTGATATAGTTCTTTTATTTGTAATAATTATTCTCTTTGTTTTATATATTTGGTTGGGCTTGTCTGTCCAGTAGCATTGTTCTTTTTAGCTTTATGCACATTTGAAACTTATGTGAAATACATTTTTCTGGGATTAGGTAATGAAGTTCGACGATCTAAAAGAACTAGGTAGTGAATCTGCTGTGAAGGTATGCAAGGCACCTAACAAAGTTGATATTGTTCAAGTGCCTCTTTTCGATATATACTTAATGAAAACGCCCATTATTGCGAATTGTAGGCTGCTGGAAAATACAGGCAGGAAGGGAAGACCTACGTGGTACAGGACGCGGATATCATCTTCTTTAAATTTAACGTGTCTGGAGGTGGAAAGAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028156