Os11g0153400

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Revision as of 09:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0153400| Description = Similar to Rac GTPase activating protein 3 (Fragment)| Version = NM_001072310.1 GI:115484232 GeneID:4349806| Length ...")
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Gene Name

Os11g0153400

Description

Similar to Rac GTPase activating protein 3 (Fragment)

Version

NM_001072310.1 GI:115484232 GeneID:4349806

Length

4797 bp

Definition

Oryza sativa Japonica Group Os11g0153400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:2483692..2488488

Sequence Coding Region

2484188..2484576,2486507..2486627,2486752..2486871,2487342..2487572,2487650..2488228

Expression

GEO Profiles:Os11g0153400

Genome Context

<gbrowseImage1> name=NC_008404:2483692..2488488 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:2483692..2488488 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgacggaggtggcgctcctccgtggcccgaccaacctcgcttcccccacaagctccaccctgcgctatttagccaatggcgacagcgatgtctcgctcccaaggagaagcagccgcgaggaggagagccctgcaggactccaagaggaggaggaggaggaggaggaggagaggtggtcgttcttggcgctgctgcttgagctgctgcggaagtcgctgctccggtgcagtacggtgcaggagggcggcggcgagtgcgggatggagattgggtggccgacggatgtgcagcacgtggcacacgtcaccttcgacaggttccatggattcctcggcctccccgtggagctcgagcccgaggttccccgccgggctcccagtgcgagtgcaagtgtctttggcgtttcaacagaatcaatgcaatgttcctacgattccagaggaaacagtgtaccaacgattctcttgatgatgcaaagacgtctttatgaacaaggcggtcttcgggcagaaggtatttttcgtataaatgcagagaatagccaggaggagtttgtgagagatcagttaaatagtggaattgtgccggatggcattgatattcactgtttgtcaggtctaatcaaagcctggtttagggaactgccgagtggggtgctggattctatcccacctgaacaggtgatgcaatgccaatctgaagaggattgtgctcgagtcgccaaatgccttccaccagctgaagcagctttacttgagtgggcagttaatttaatggctgatgttgtccaagaagaacagataaacaagatgaatgctcgtaacattgctatggtttttgcaccaaatatgactcagatgtcagatccattgaccgcactgatgtatgcggtgcaagtgatgaattttctcaagatgctaatacagaagaccctcaagggtagacaagagtccaatctggaggacacatctctgccccataaggacccatctgatgaaagtggacaccataaaccctgtctcacacttgagtctctcctcgaggaagaatccaggcgtccctctttcgtcgaagaggagcccattctgaacagtcccgcacatggcaccggctacaatcctattgaggttaatcctgtccaaggaaaaactgctgcttccattgcacagacaagtgaagttcagacgatcatagagggctccagtagttgctcccgaccttctctgactgatccgcctgctactgctgatcctgtctgtgctgaagctgcgaactcgcttcaacgaaagggaagccgaagcctgaatagtaggaggacaagaaagggcaaagggcagtctggaacgagtgccacttcctcagctgagaaatcaaaaggcacgagcattgtaagccggataaactccaagattgaacgaattgaagcatggaggtga</cdnaseq>

Protein Sequence

<aaseq>MTTEVALLRGPTNLASPTSSTLRYLANGDSDVSLPRRSSREEES PAGLQEEEEEEEEERWSFLALLLELLRKSLLRCSTVQEGGGECGMEIGWPTDVQHVAH VTFDRFHGFLGLPVELEPEVPRRAPSASASVFGVSTESMQCSYDSRGNSVPTILLMMQ RRLYEQGGLRAEGIFRINAENSQEEFVRDQLNSGIVPDGIDIHCLSGLIKAWFRELPS GVLDSIPPEQVMQCQSEEDCARVAKCLPPAEAALLEWAVNLMADVVQEEQINKMNARN IAMVFAPNMTQMSDPLTALMYAVQVMNFLKMLIQKTLKGRQESNLEDTSLPHKDPSDE SGHHKPCLTLESLLEEESRRPSFVEEEPILNSPAHGTGYNPIEVNPVQGKTAASIAQT SEVQTIIEGSSSCSRPSLTDPPATADPVCAEAANSLQRKGSRSLNSRRTRKGKGQSGT SATSSAEKSKGTSIVSRINSKIERIEAWR</aaseq>

Gene Sequence

<dnaseqindica>497..885#2816..2936#3061..3180#3651..3881#3959..4537#acgcgtgaacgggaagcgagagagaagcatggccatccaccatgtctgcatctgcatggccaaaaaggggaggaagaagaaatgagatgacaatgatgatgatgatggtttcatcacccaaccctcccttcaatccaacttcacctccacaaaaatcctatccattatccaccaaacactcgaaaatttccatcttttccagttaaaaatcaaaaatcccctatccttgtttgcttccatttcgtcgcggatttggaccacgctgcaaccaatccccatccagaacgatcccaatctccgatgggaagattctaaatttgcaatccacccaagaactccactacgagagcttccccccaatcataactccctcgctcgctgcatccccagttccccaccacgacgacccaagaaacgcctcctgaattcgtccctacccgcgccagatcggagctcgtagcaataatcatcgggagagagagataaagaggaagcaatgacgacggaggtggcgctcctccgtggcccgaccaacctcgcttcccccacaagctccaccctgcgctatttagccaatggcgacagcgatgtctcgctcccaaggagaagcagccgcgaggaggagagccctgcaggactccaagaggaggaggaggaggaggaggaggagaggtggtcgttcttggcgctgctgcttgagctgctgcggaagtcgctgctccggtgcagtacggtgcaggagggcggcggcgagtgcgggatggagattgggtggccgacggatgtgcagcacgtggcacacgtcaccttcgacaggttccatggattcctcggcctccccgtggagctcgagcccgaggttccccgccgggctcccagtgcgaggtattcggctcgaagctctgaacaatgtggttgttgttctgaatccaatggtttctgaacattcagtttcagactttcagttggaagtctatttttgtggaaatgtgaatcccttttcactcccgattgcattttggaggtgttttgatatgaagtgctataggaaaatttgtgttttgctcagttataagaaaatagaactgttggttgttgaagttcagtgttttggtatggcacatctattcgcattgcaacctcaaggatgggttggtttgaaatttcatataaaagcagtttttttcccgttgttttctactaggtggtattagattcctcttgaataatgtgaatttcagttctgttgtgttttaaactttgtaacctcacctgaatttgaactgtatattctcatgatgagtaggttttcgcaccaccagtctgcagaaattggtggcattgcattttcttcatgtttcattgattaataattagtcaatcatgtttctctatggtctggtatttgatatggccgcataattttgctgtagtgtcttacgtcatataattatgccggtcacctttttatgattcggaaaatggatttcgcttccatatgagcctgatgaggtctgtataatgaggactagctataatttgaagcgtacatttacggaaatcataattgcctataaatttgaatatttgatacagaaacaagacagtcatacatttgaattattttgatattctgcatttgggtaacagtagctattttgttcacttgcttaattctggtaaaagtatttcattcatggtcctctaaatgccaatcctgtttttatttgtaagaaaccaaaagaatcttcaatatcatgtgttaaaatatatgggttctcagaattttttttaaaaaagcatgccttttgtgaagttattgtggtatttatatttatctcagctatatcacctattggcttttttttcatgcaaatgcttatgcctgctatgcaaaaatactatttatcaactattactaccttatatcacagcattgcatctagtgctttggatgatgcctttattgttcaggactgtttgtcattgtcaaactcattttggatcacactttaggagcttgaaaataaaagttttctgggttgcgctcctttctggcttaagtaaagtgcatacgcatattgtatattattttatatcgggaattgcaggacgtgagcaattagttttaggttatctataaagaatagataaaaacggttatcagtttctactttatagaaggatgggactctgggagcacggtgcctccaaaagaagataaagtggcacatacacctataatgcatcttcaaactgaatgtttgctgctatatgataaatgaaactgcagcatatgagttgtggtcagttaacggttggataacttctgcaatgagtaaagtttctgaaataacaagaaaacataatttcccaggacaattgagcatctgagttagcatttagcaaactagtatatttatttcagaaccaaaataataatgtgaattttgttcacatatttataccgatgccatgcttttaaccatgcaaagatttgcaggaatcctggtataacttttgtaagaattcaaagtgttcctttgcaccacccgaacagttaaaagacggttcattacaatttacaatatgcttgaattgattcaaaaaaaaaaaaagaaaggaaaaaaatctttgatgctgatggcaatgtgctttccttttcatatggtggtatcatattatcctacttttgcaagatgcatgtgtttggcaatgacactgtacttttgataaatatactctagaatttagttcttgttcatgtttacaccagctgttggtatttgtcagctgatcaaaacttaaaatgcagtgcaagtgtctttggcgtttcaacagaatcaatgcaatgttcctacgattccagaggaaacagtgtaccaacgattctcttgatgatgcaaagacgtctttatgaacaaggcggtcttcgggtgtgatttttaagcatttatagttacatctttttaatcactggcttgtagctttgttctgaccaaataattcttatcttgtttgtatttttgacggaaatcttatcttgtttgtaatttgcaggcagaaggtatttttcgtataaatgcagagaatagccaggaggagtttgtgagagatcagttaaatagtggaattgtgccggatggcattgatattcactgtttgtcaggtctaatcaaagtaagcctctttctgtcatgtatcttacgtgaatctgttgactgcattatcttcattgtcgcatatattgtgttagggcattgcatgttcttcacttgggaacttattaattagcagatgtgttcatcttcagttatagagtttcatattaacagctaccacctaccagagaacccacacttttgcttttgaagggaactcaatcttctccctccctctcttttttcacaccagatatatttccacaagttttttttttttgggtgctatgtagtaagtttctgttgtgaatttgatttgcttatagaagcagttaaggggtgcagtcaacttattggaagttactagttttgtgtccctgagaattgtcaactaggaaacacacatattctatagagcgaaataattttataacacaaaataaaaaatctatagggatctcattccatctatttgtccttttctgccaggcctggtttagggaactgccgagtggggtgctggattctatcccacctgaacaggtgatgcaatgccaatctgaagaggattgtgctcgagtcgccaaatgccttccaccagctgaagcagctttacttgagtgggcagttaatttaatggctgatgttgtccaagaagaacagataaacaagatgaatgctcgtaacattgctatggtttttgcaccaaatatgactcaggtaatgcactgtcctaataataaacttatgattttaagtgtggtcgatgcttactgtcatgcacatatgtaatgcagatgtcagatccattgaccgcactgatgtatgcggtgcaagtgatgaattttctcaagatgctaatacagaagaccctcaagggtagacaagagtccaatctggaggacacatctctgccccataaggacccatctgatgaaagtggacaccataaaccctgtctcacacttgagtctctcctcgaggaagaatccaggcgtccctctttcgtcgaagaggagcccattctgaacagtcccgcacatggcaccggctacaatcctattgaggttaatcctgtccaaggaaaaactgctgcttccattgcacagacaagtgaagttcagacgatcatagagggctccagtagttgctcccgaccttctctgactgatccgcctgctactgctgatcctgtctgtgctgaagctgcgaactcgcttcaacgaaagggaagccgaagcctgaatagtaggaggacaagaaagggcaaagggcagtctggaacgagtgccacttcctcagctgagaaatcaaaaggcacgagcattgtaagccggataaactccaagattgaacgaattgaagcatggaggtgaaatcaattgttattgccccccttattgtcatgtaatcgattacccaatgtttccttaagaccgagttcggtgttcttgcacatttttcaattttgttatgcttattgtttcttgttggatcatgatcatgttattttgatacggctaacttattttgtcttgtctgtgagtacatgaggttgtctgtgaatgcaacaaagaaattttgattccttcgtacatagtacatttctttattgccaggtgtatggaagttcagg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0153400, RefSeq:Os11g0153400