BGIOSGA028182

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Revision as of 07:54, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028182| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028182, complete gene.| tag = OS08G02...")
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Gene Name

BGIOSGA028182

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028182, complete gene.

LocusTag

OS08G0206400

Ensembl Transcript ID

BGIOSGA028182-TA

Ensembl Protein ID

BGIOSGA028182-PA

Length

4463

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:6729253..6733715

Sequence Coding Region

6729253..6729372,6729782..6730007,6730405..6730650,6730721..6730771,6731134..6731394
,6731490..6731542,6731608..6731722,6731888..6732142,6732676..6733715

Genome Context

<gbrowseImage1> name=IndicaChromosome08:6729253..6733715 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:6729253..6733715 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCTATTTCGGATAGCGAGACGACGAACCATGGGAGCATATGGGATTTGGATCAGAACCTTGATCAGCCCATGGATGAGGAGGCTAGCCGGCTCAAGAACATGTACACAGAGAAGAAGTTCTCGTCGATTTTGTTATTACGGCTCGCGTTTCAGAGCCTTGGTGTTGTCTTCGGTGACTTAGGTACATCTCCATTATATGTCTTCTACAATATATTCCCTCATGGGGTCGATGATGATGAGGATGTTATTGGGGCTCTTTCCTTGATCATTTACACCCTCACCCTCATTCCTCTGATGAAGTATGTTTTTGTTGTCTTGCGGGCAAATGATAATGGCCAAGGTGGCACATTCGCTCTCTATTCTTTACTTTGCCGGCATGCAAAGGTCAGCACTATTCCCAACCAACATAAGACAGATGAAGAATTAACAACATATAGTCGGCAAACTTATGAAGAGAATTCACTTGCAGCAAAAATAAAGAGATGGCTAGAGGGACATGTGTATAAAAAGAACTGTCTTCTTATTCTAGTTCTCATTGGTACCTGCACAGCCATTGGAGATGGGATCCTTACTCCTGCTATATCAGTTCTCTCTGCATCAGGTGGAATAAGAGTTCAGAATCAGAAGATGAGTACAGATGTGGTTGTAGTCGTTGCTGTGATCATACTAATTGGCTTATTCAGCATGCAACACTATGGTACAGATAAAGTTGGATGGCTCTTTGCACCTATAGTGCTCCTTTGGTTTATCCTAATTGGGACTATTGGGGCACTGAACATACACAAGTACAACAGTTCAGTCCTAAAAGCATATAATCCAGTCTATATCTATCGGTATTTCCGACGAGGGAAGTCTGAGAGCTGGACCTCCCTTGGAGGAATCATGCTTAGCATCACAGGGACTGAAGCATTATATGCTGACTTATGTCATTTCCCTGTCTTGGCCATTCAGATTGCTTTCACGTTAGTGGTGTTCCCTTGCCTTCTCCTAGCATACACCGGACAGGCTGCGTACATTATTAGCAACAAGGACCATGTAGTTGATGCCTTTTATCGCTCCATTCCAGATACCATATACTGGCCAGTATTCATCATTGCAACTCTTGCAGCAATAGTTGCAAGTCAAGCCACTATATCTGCTACATACTCGATAATAAAGCAAGCTCTCGCACTGGGCTGTTTTCCTCGAGTCAGTGTCGTCCACACCTCAAAGAAATTTCTCGGGCAGATTTACATCCCTGACATCAACTGGGTACTTATGATTCTTTGCATTGCAGTAACAGCTGGATTCAAAAACCAAAGTCAGATAGGAAATGCATATGGAACTGCAGTGGTGATAGTTATGCTGGTCACGACATTTCTCATGGTCCCAATAATGCTGTTAGTATGGAAAAGCCACTGGATCCTTGTTGTCATTTTTATCGTGCTCTCGTTGATGGTGGAGCTCCCATACTTCACAGCCTGCATTAACAAGGTTGACCAAGGTGGTTGGGTTCCACTTGTTGTTGCAACTACCTGCTTCATCATCATGTATGTGTGGCATTTCTGCACCGTGAAGCGGTATGAATTTGAGATGCACAGCAAGGTTTCCATGGCCTGGATTTTAGGACTCGGACCAAGCCTCGGCCTCGTCAGGGTGCCTGGGATAGGCTTCGTGTACACCGAGCTGGCAAGTGGAGTGCCTCATATCTTCTCCCATTTCATCACCAACCTCCCTGCCATCCACTCAGTCGTCGTCTTCGTTTGTGTCAAGTACCTCCCAGTATATACAGTCCCAACCGAAGAAAGGTTCATCGTGAAGAGGATCGGGCCAAAGAACTTCCACATGTTCCGTTGTGTCGCGAGGTACGGGTACAAGGACATCCACAAGAGAGATGACGACTTCGAGAAGATGCTCCTTGACAGGCTCTTGCTCTTCGTCAGGCTGGAGAGCATGATGGATGACTATTCGGACTCCGAAGACTTCACCATGATGGAGGAGAAGACCCAGGGATCAAGCAATGCGCTGCTGCTAACTGGAAAGGCTGGGAGCAACACAATGTGCTCCACTGGTGACCTGAGCTACTCATCACAGGACTCCATTGTTCCAGCCAAGTCACCCATAAGAGGGAACAGCCTGACAAGGTACTCGAGCCAGACGTTCGGCGATGAACTGGAGTTTCTGAACCGGTGCAAGGACGCTGGTGTCGTGCACATCCTGGGGAACACTGTGGTTCACGCGCGCCCTGATTCGGGGATCATCAAGAAGGTTGCTGTGAATTATGTGTTTGCATTCCTCAGGAAGATCTGCAGGGAGAACAGTGTGATATTCAATGTTCCCCATGAAAGTCTTCTCAATGTAGGCCAGATATACTATATATGA</cdnaseq>

Protein Sequence

<aaseq>MASISDSETTNHGSIWDLDQNLDQPMDEEASRLKNMYTEKKFSSILLLRLAFQSLGVVFGDLGTSPLYVFYNIFPHGVDDDEDVIGALSLIIYTLTLIPLMKYVFVVLRANDNGQGGTFALYSLLCRHAKVSTIPNQHKTDEELTTYSRQTYEENSLAAKIKRWLEGHVYKKNCLLILVLIGTCTAIGDGILTPAISVLSASGGIRVQNQKMSTDVVVVVAVIILIGLFSMQHYGTDKVGWLFAPIVLLWFILIGTIGALNIHKYNSSVLKAYNPVYIYRYFRRGKSESWTSLGGIMLSITGTEALYADLCHFPVLAIQIAFTLVVFPCLLLAYTGQAAYIISNKDHVVDAFYRSIPDTIYWPVFIIATLAAIVASQATISATYSIIKQALALGCFPRVSVVHTSKKFLGQIYIPDINWVLMILCIAVTAGFKNQSQIGNAYGTAVVIVMLVTTFLMVPIMLLVWKSHWILVVIFIVLSLMVELPYFTACINKVDQGGWVPLVVATTCFIIMYVWHFCTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGFVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPTEERFIVKRIGPKNFHMFRCVARYGYKDIHKRDDDFEKMLLDRLLLFVRLESMMDDYSDSEDFTMMEEKTQGSSNALLLTGKAGSNTMCSTGDLSYSSQDSIVPAKSPIRGNSLTRYSSQTFGDELEFLNRCKDAGVVHILGNTVVHARPDSGIIKKVAVNYVFAFLRKICRENSVIFNVPHESLLNVGQIYYI</aaseq>

Gene Sequence

<dnaseqindica>1..120#530..755#1153..1398#1469..1519#1882..2142#2238..2290#2356..2470#2636..2890#3424..4463#ATGGCGTCTATTTCGGATAGCGAGACGACGAACCATGGGAGCATATGGGATTTGGATCAGAACCTTGATCAGCCCATGGATGAGGAGGCTAGCCGGCTCAAGAACATGTACACAGAGAAGGTCAGAGATTGATCCTTGCTCATGGGGATATTTTTTTTCTAGATATTTTTCTGGGTAACAATCGTGCTTCCAGCTTAGTGTCTGCTTGTATTTGGAACAAGAAAAAAAAAACATTGTTTCTTTGACATGGATGATTCTGTATGACCTCATGGTTTTGGGGACCATTTCAATATAAAAAGGATTTGAAACTGTATGATGGATGTGCTGTTACTGTAGGTTTCCAAATGCAGGAACTGTATACGGATTTTATAGTATCTTTATTCGTTTCACCTCAAATTGTTAGGCACTGGCAGCATAAGTGATGTTAGTGTGGAAAGATAATGTACTCCCTATGTCATTTTGGCAATGCGTAAATATCATATTCTTAGCTCATGGGGAGCTAAAATGTGCTTTGTTTTTGTTCATGCAGAAGTTCTCGTCGATTTTGTTATTACGGCTCGCGTTTCAGAGCCTTGGTGTTGTCTTCGGTGACTTAGGTACATCTCCATTATATGTCTTCTACAATATATTCCCTCATGGGGTCGATGATGATGAGGATGTTATTGGGGCTCTTTCCTTGATCATTTACACCCTCACCCTCATTCCTCTGATGAAGTATGTTTTTGTTGTCTTGCGGGCAAATGATAATGGCCAAGGTGAGATATCACATTCTGCCAATGTTTAACCAAATATGCTGCTTCTTTATTTACTTATCATCTGAAAAAAAATAGAAAAATGCAGTTAGGAAATATCTCATGTTAGTCAAATATAACAAGATTTTGGTATGAGATGAGAATATAGAAATATTATGCAATTTTACCATTTCGATAGGTTGGCACATAAATAACAGAACATTGTCGTAGTGATGCCAGAATGATTGGTAGATAGCACTGAACTAGTCATGAAATCTGTAGAAGGTGATGTCCTGAGTTCATTCCGTTTTGTGCTCAGAGAACAGTTACTGACAGTCACTTGGCAATAAATTGACATAGGAGTAGTTTGTTTGCATTTTGCACATTTTTTTAGATAATAAATTTTAGACTTTTTTCACAGGTGGCACATTCGCTCTCTATTCTTTACTTTGCCGGCATGCAAAGGTCAGCACTATTCCCAACCAACATAAGACAGATGAAGAATTAACAACATATAGTCGGCAAACTTATGAAGAGAATTCACTTGCAGCAAAAATAAAGAGATGGCTAGAGGGACATGTGTATAAAAAGAACTGTCTTCTTATTCTAGTTCTCATTGGTACCTGCACAGCCATTGGAGATGGGATCCTTACTCCTGCTATATCAGGTATTCAGCATAGTAGTTTCATTGGTAAAACCGATTGGAACTTGGATTGTGACACTTGTTTGCTCTGCAGTTCTCTCTGCATCAGGTGGAATAAGAGTTCAGAATCAGAAGATGAGTACAGGTAATTCTGCTCTTTGTATTTTTATATTGGTGTTGTCAAATCTGGTCAATTATCTCTTTTTTAAAAAAAAATGGATTAAAATCTGGCCTCTACACCCAAAAGGATGTACACGGCCAAATCTGGTCAATTCTTAACTGAACTTAATATAGTGTAACTAGTATACAGGGATGTGAACTTGACCAAAGTGAATGAAAGAAACCAGCAACGGTATCTTAAATATTGTGTGCGCAAATATTGTGATCTTGGGCCACTATGTTGCATTGTTCACTTCCTTTGATTTACTGAGAAGCTTTCTTCCCTATGTAGTGTTATCTCCCATTGTTGTAAAATCATTTGATGTTTATTGCTTCAATACCTGGCAGATGTGGTTGTAGTCGTTGCTGTGATCATACTAATTGGCTTATTCAGCATGCAACACTATGGTACAGATAAAGTTGGATGGCTCTTTGCACCTATAGTGCTCCTTTGGTTTATCCTAATTGGGACTATTGGGGCACTGAACATACACAAGTACAACAGTTCAGTCCTAAAAGCATATAATCCAGTCTATATCTATCGGTATTTCCGACGAGGGAAGTCTGAGAGCTGGACCTCCCTTGGAGGAATCATGCTTAGCATCACAGGTTACTCACAATTCTCATGTACCTTTCATTGATTAATTGCATTATTCATAAATCACAAGATACAGCAGAATTACTTATATATTTTCTCTCTTCAGGGACTGAAGCATTATATGCTGACTTATGTCATTTCCCTGTCTTGGCCATTCAGGTATAAACACTTCAAACAAATCAGTCATGATAAATTGTGTCGGTAAACTAATAATGTCTGTGCAGATTGCTTTCACGTTAGTGGTGTTCCCTTGCCTTCTCCTAGCATACACCGGACAGGCTGCGTACATTATTAGCAACAAGGACCATGTAGTTGATGCCTTTTATCGCTCCATTCCAGGTCCCTGCCCCTCTGAACTAACAAATTTGGCTGTCATAAAGTAAAATGCAAATGCATCCCATGTGCAACTTGGCAAAGTGCATATCCCACCATTCTTATTGTTTACCAGTGCTGTATGCACTATATGTATTTATGTACTCATGGTGTGACGCCTGATTGCTGCAGATACCATATACTGGCCAGTATTCATCATTGCAACTCTTGCAGCAATAGTTGCAAGTCAAGCCACTATATCTGCTACATACTCGATAATAAAGCAAGCTCTCGCACTGGGCTGTTTTCCTCGAGTCAGTGTCGTCCACACCTCAAAGAAATTTCTCGGGCAGATTTACATCCCTGACATCAACTGGGTACTTATGATTCTTTGCATTGCAGTAACAGCTGGATTCAAAAACCAAAGTCAGATAGGAAATGCATATGGTAAGCTTTTCTTTTCCATCTCCAAACATGTAACTGATACTTTCAATGCACTTAAAGTAGACAATCAACAGTTTTTTACGCTGCTGCTGAATAGGGGATAGCTTCAGATAGTTTTCATTTTAAGCCGAACAAAATTGGCATTGTTCCATAAGTATTTTCTAGCTTTATGTCACGATATGTGCGCGGTGTGTTGTCAGCTACCAAGTCTAGGTTCTAAAAGACTGGTGCTATGGTACAAAAGAAGCAATATAATTGAGAACTGATAGCTGGATAATAATTAAATCCTAAATAAACTTTCTTACCACATTGCATGATGCTTCAGGTTTTAAATGAGCTTATCTTTCTATAAGAAGTAAAGTGGGTCAGCATTATCTGATAGAGAACATTATCAAAACAGCGCGATGCAATTTTTTTAGGACACTGCAAATTGACAACTGATGTTCTCAAAATATAACTGCAAACCGAACATTAATGTTGCATTTTGCATTCCATAGATGTCACCCTAATTGTTTTCTTATGATATCGTTGAACAGGAACTGCAGTGGTGATAGTTATGCTGGTCACGACATTTCTCATGGTCCCAATAATGCTGTTAGTATGGAAAAGCCACTGGATCCTTGTTGTCATTTTTATCGTGCTCTCGTTGATGGTGGAGCTCCCATACTTCACAGCCTGCATTAACAAGGTTGACCAAGGTGGTTGGGTTCCACTTGTTGTTGCAACTACCTGCTTCATCATCATGTATGTGTGGCATTTCTGCACCGTGAAGCGGTATGAATTTGAGATGCACAGCAAGGTTTCCATGGCCTGGATTTTAGGACTCGGACCAAGCCTCGGCCTCGTCAGGGTGCCTGGGATAGGCTTCGTGTACACCGAGCTGGCAAGTGGAGTGCCTCATATCTTCTCCCATTTCATCACCAACCTCCCTGCCATCCACTCAGTCGTCGTCTTCGTTTGTGTCAAGTACCTCCCAGTATATACAGTCCCAACCGAAGAAAGGTTCATCGTGAAGAGGATCGGGCCAAAGAACTTCCACATGTTCCGTTGTGTCGCGAGGTACGGGTACAAGGACATCCACAAGAGAGATGACGACTTCGAGAAGATGCTCCTTGACAGGCTCTTGCTCTTCGTCAGGCTGGAGAGCATGATGGATGACTATTCGGACTCCGAAGACTTCACCATGATGGAGGAGAAGACCCAGGGATCAAGCAATGCGCTGCTGCTAACTGGAAAGGCTGGGAGCAACACAATGTGCTCCACTGGTGACCTGAGCTACTCATCACAGGACTCCATTGTTCCAGCCAAGTCACCCATAAGAGGGAACAGCCTGACAAGGTACTCGAGCCAGACGTTCGGCGATGAACTGGAGTTTCTGAACCGGTGCAAGGACGCTGGTGTCGTGCACATCCTGGGGAACACTGTGGTTCACGCGCGCCCTGATTCGGGGATCATCAAGAAGGTTGCTGTGAATTATGTGTTTGCATTCCTCAGGAAGATCTGCAGGGAGAACAGTGTGATATTCAATGTTCCCCATGAAAGTCTTCTCAATGTAGGCCAGATATACTATATATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028182