BGIOSGA028184

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Revision as of 07:54, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028184| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028184, complete gene.| tag = OsI_282...")
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Gene Name

BGIOSGA028184

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028184, complete gene.

LocusTag

OsI_28224

Ensembl Transcript ID

BGIOSGA028184-TA

Ensembl Protein ID

BGIOSGA028184-PA

Length

5363

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:6751114..6756476

Sequence Coding Region

6751114..6751116,6751212..6751310,6751394..6751489,6751623..6751721,6751802..6751900
,6753384..6753530,6754011..6755468,6756447..6756476

Genome Context

<gbrowseImage1> name=IndicaChromosome08:6751114..6756476 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:6751114..6756476 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTCAAGTCAAGGATGAAGCTGCCATGAATGGGCTGTCTGATGACTGTTTGAAAGAGGACAGTCCAGGAAAGAATGAACCAAATCACAAGAGTAATCTGGTTGAAAATAGTGATAAACCAGTCATGAAGGGGCCTGATGGATGGTGGAAAGAAGGCATGCTAACAAAGAATGGGTCAAAGTACAGGAGTGACCCGGTTCAAACCAAGGGTGAAGCATGCATCAATGGGCTTCCCGGTGGACAATGGAAAGAAAACAGTGCGGAAAAGAATGTATCAAATCACAAGAATGAGCTGGTTCAAAGAAAGGATGATCTAATTGTTGATGGGCTTCCTGATGGATGGTGGAAAGAGGACAGACCAAGGAAGAATGGATCAAATCTGAAGACTGATCCGTACTACATTGATCCAGTCAGTGGATATGAATTTCGCTCTCTGAAGGATGTGCACCGTTTTCTTAAATCAGGGGACATCTATAAATGCATTGTAAGGCCAAGAAAGAGAACTATCCAAGATCCTTGTACTATTGAAAACCAATCTCATACAGCAACATTGTTGCAACATACAAGGCCAGGTACCGCCGACAAGGCCATTCAATGTGAATTGCTAACTTCAGAAGGTCTCATGCTGCCGTGGGAGGAACAGCTCAGTCCATATAGAGAACTCAACAACCCAAAAAAGATGCCCGAGTTGGAGGGCATGATAGCATCTCAAAAACATGCCTACAAAGTTGATGCTCCAAGGGAAAAGAAATCTTTTCCGAGAAAAAGAAAACAGCCAAGTGCAGGAGGGAAGCCCAAGAAGCATAAAATCGTCCCTGCAAAAATGGTTGCCATGCCTGTCCGAGCATCACCTCGCTTAGCTTCACTGAAGATCACTCATGATTTAAATACTGAGCCTGAAGATGAACCTATCGGTGTAAATCTTGTCAATGAGGTACAGTCTACTAAAGAAAATCCTACTGATAAGTCACGATTGAACCAAGCAGGCTTTTCCACTGAAATGACGTCTGTTCAAGAAAGGGCTGACAATCAGTTGCTGTCAAGCCAAGCAGACACTGGGAATCACATACGTGTTATGGAGGGGGACACTACAGATTTGTCACAGCTGAGACAAGCTGACACTGTGAACCAAATACTCACAGATCAGGAAAATGCTGTCAGTCAATTACAGTCGAGCCACACAGATTATTTTGTTCAAATACGACCTAGACAAGAATACGTTACCAATTACTCACAATCACAGTTGAGCCGCGCTGCCACTGTGAATCAAATAGAGACTAATCAAAGGAACATGTCAGGTCAGTTGCAGTCTAGCCAAGCAGATTCTCTGGATCAAATACAGACAGAGCAGGAAAGTTCTGCCAGTCGGTTACAGTCAAGCCAAGCAGACTCTTTCAATGAAATACAGACTATACAAGAATACATTACTGAACAGTCAGAGTCACAAGTAAGCCATGCAAATCAAATACAGATTGATCTAGGAAACACTGTCGATCTGTTGCCGTCGAGCCAAGCAGACGCCATATTTCAAATGGAGACTACACAAGAATACATTACCAACCAGTCTCAGTCAAGCCAAGCAGATATTGTGGATCATATGCAGGTTAATCAGGATAACACTGCTAATCAGTTCCATTTGAGACAAGCTGACACAGTCAACAGAATACAAACTATGCAGGAGAGCACCACTGATCAGCCACAGCTCATCCAAGCTTTAACTGTGAATCAAATACAGGTCAATGGGGAAAACACTGCCAATCACGTCCAGTCAAGGCAAGCAGATACTGTGAATCATATACAGCTTAATCAGGATAACACTGTCAATCAGTTCCAGTTGAGACGAGCTGACACAGTCAACAGAATACAAACTATGCAGGATAGCACCGCTGATCAGCCACATCTCATCCAAGCTTTAACTGTGGATCAAATACATGCCAATAGGGAAAACGTTGTCAATCACTTCCAGTCAAGGCAAGCAGATACTGTGAATCATATACAGGTTTGTGATGGCTTCATCATCCACATCTAA</cdnaseq>

Protein Sequence

<aaseq>MVQVKDEAAMNGLSDDCLKEDSPGKNEPNHKSNLVENSDKPVMKGPDGWWKEGMLTKNGSKYRSDPVQTKGEACINGLPGGQWKENSAEKNVSNHKNELVQRKDDLIVDGLPDGWWKEDRPRKNGSNLKTDPYYIDPVSGYEFRSLKDVHRFLKSGDIYKCIVRPRKRTIQDPCTIENQSHTATLLQHTRPGTADKAIQCELLTSEGLMLPWEEQLSPYRELNNPKKMPELEGMIASQKHAYKVDAPREKKSFPRKRKQPSAGGKPKKHKIVPAKMVAMPVRASPRLASLKITHDLNTEPEDEPIGVNLVNEVQSTKENPTDKSRLNQAGFSTEMTSVQERADNQLLSSQADTGNHIRVMEGDTTDLSQLRQADTVNQILTDQENAVSQLQSSHTDYFVQIRPRQEYVTNYSQSQLSRAATVNQIETNQRNMSGQLQSSQADSLDQIQTEQESSASRLQSSQADSFNEIQTIQEYITEQSESQVSHANQIQIDLGNTVDLLPSSQADAIFQMETTQEYITNQSQSSQADIVDHMQVNQDNTANQFHLRQADTVNRIQTMQESTTDQPQLIQALTVNQIQVNGENTANHVQSRQADTVNHIQLNQDNTVNQFQLRRADTVNRIQTMQDSTADQPHLIQALTVDQIHANRENVVNHFQSRQADTVNHIQVCDGFIIHI</aaseq>

Gene Sequence

<dnaseqindica>1..3#99..197#281..376#510..608#689..787#2271..2417#2898..4355#5334..5363#ATGGTATGCAGATTTCTAACTTCATCTACCCCTTTTCATTTGTTCCAAGTGCAACATGACATATATGTCAATGATGACCACTCTATATTCGTTGCTAGGTTCAAGTCAAGGATGAAGCTGCCATGAATGGGCTGTCTGATGACTGTTTGAAAGAGGACAGTCCAGGAAAGAATGAACCAAATCACAAGAGTAATCTGGTATGCTGTAACGATCCTTGTTTTTGTCTTGCCTTTTCTATCTAAAACACTTCACTTTGTCATTATAATTATTTTATTCTTAGGTTGAAAATAGTGATAAACCAGTCATGAAGGGGCCTGATGGATGGTGGAAAGAAGGCATGCTAACAAAGAATGGGTCAAAGTACAGGAGTGACCCGGTATGCTGTCATGATTCATGACCCTTTTTTCTCTTGCTGAGTTCTATCTAAACCGAGTAAACAACATGCTATCATGACCCTTTTTCTCTTGCGCCTTTCTGTCTAAACCAATATACTTGTTATTTCATTATAGGTTCAAACCAAGGGTGAAGCATGCATCAATGGGCTTCCCGGTGGACAATGGAAAGAAAACAGTGCGGAAAAGAATGTATCAAATCACAAGAATGAGCTGGTATGCTGTAATGATCCATTTTCTCTTACTCCTTATCTGAAAAAGATATATCTAACTAGCTCTAATTATTTCATTGCTAGGTTCAAAGAAAGGATGATCTAATTGTTGATGGGCTTCCTGATGGATGGTGGAAAGAGGACAGACCAAGGAAGAATGGATCAAATCTGAAGACTGATCCGGTATGCTGCAATGTGTTACTTTTTTCTTGCTAATTTCTGCCTAAAACAATACATCTAAGGCTCGGTTCAAAGCGCTTATTTGATTCTAACTGTGAACTACTCCCTCGGTTAAAAAATATAAGGTGTTTAGGTTTCGTTAGGACAAGGCTTTGACATGTCCAGTTTGCAAATACTTGTTGTTTTGCACATGGACATGGTCTCCAAATAACAATTTTGACCTCTGTTTTCTATTACAATATATGTACAAAAGTACAAATATCAACAATATATGATTTTATTGAGGTAATTTTCAAGATTAATCTTATATATATGGTGTCCATATTTTTGAAGTAAATATTTTAGAAGGGCATAGTCAATGTTTAGAAGTTTGACATCTGTCTTGTCCGAAACGGCAAGTATGTGCAAACTGGAGGGAGTATAATTTATATGAAAAAAAAATGATGTTATTAGATTTGTATTCAAAAGTACTTATGAATTATGATTATGCCTTTTATCCACAAAAATGAGCATCCTAACAGAGTAATTTTTGGTCAAAGCCTTGTCCTAATGAAACCTAATACACACTATATTTTTGAACGGTGGGAATAATTGTTGTTTGAAACACTCATTTCTTTGGAGCCGTGACAACTAAATCTTACTAGAATCAGTAAAGAACCAGATTCCATACTGCAGCACAATCACCGCATCGGTCCAAAGTCATTAGCATGTCTATGGATACTTGCACTTAATATCTCAAGAACTCTAAGCTGAGTTTCAACTCTCCATATTCATCTCAATATTGTGCAGCAACAATACCCTATGCCTAATATAATTGCAACCAGCAATATTGTTCCACTTGCATCTTGGTTCTATTTTGAGGTAGAGTAGCCACCCAAGAAATATATTCTACAGGTGCTGCATGTATGCTGTCGTATGCGACCATCTCAATAAGAAAAGCAGTTAAAAGCAATATAGGGCCTGTGTGTTTCTTGCAAAAGTTCCCTTTTGTCGTATCCATAGGTTAACTTACCATCTTTACAATAAGCTCATTTGTTCTGAACCGCCACATTTCCAAGGAGGCCAAATTTGTTAGTCATCCTCTTCCGTGGCACATGTGGGTGCTGGTGTTACTTGTGATATTATTTGAAGCATGTCTTTGTTTGAAATGTCAATTATGATTTCATAGCGTGAACATTTTTATATGAGCATATCCTGTGCTCCTGTCAGTTGAACCTACATTTTAGCGTGCCCAGTGTTACCTTTGGTGCTAGGTGTGGGTATGATGGCAGGCCAGCACCTAGCGCCAACAGCCACCAAGGCGAGTTACTGACTGCCTAAGCAGGAAAAATCAGTTTGTCAGCCTAGGCGGGCACTGTTCCCCTTGTTGACTTTATAATGCATGTTGCATTGCTAGCTCTTGTGATCCTTTAATAATGAAAGCCTTCAGGGCATTCCAGGAATGTTGTGTCTTAAACTTATTTTTGCCTTGTTTTAATCTCTGCAGTACTACATTGATCCAGTCAGTGGATATGAATTTCGCTCTCTGAAGGATGTGCACCGTTTTCTTAAATCAGGGGACATCTATAAATGCATTGTAAGGCCAAGAAAGAGAACTATCCAAGATCCTTGTACTATTGAAAACCAATCTCATGTGAGTTCCTTGCAGTTCTTCTTGGTTTGAGTTACTGGGGCATTTTGCTTCTTCTATCAGGACATTAAATAAACAAAAATACTAGGTATCTTAATTACCATGCACACCTCAAATTGAACATATTTGCTTTGGTTAAAATTTATAGAGTCCAGCCCTAGTAATTATATGTTTCTTGTAGCTCAGACATCAGCCACATGTGAAGTGTCAACTGCTCCTTGTCCTGGTTGCCCCTCTTTGCGTGCGTAAAGAATCAGAGTTTTCATGCACTATTACATCAGATAAAGAACTCTGATTCCTTCTTGAATAATTGTCGTTTAGATACATGGAAATCATGTGTGCAGATCTGCCTAAAAATTACTAACAAAATATTTAAATAGAAATTTGTGGCCAAAGTTGTGTTTTGAAGATGGCAAAAATTTCCTTTTGTATGTCCCCTTTTCACAACAATTTGTACTTATTAGATCATTTTGTGAAAATCAGACAGCAACATTGTTGCAACATACAAGGCCAGGTACCGCCGACAAGGCCATTCAATGTGAATTGCTAACTTCAGAAGGTCTCATGCTGCCGTGGGAGGAACAGCTCAGTCCATATAGAGAACTCAACAACCCAAAAAAGATGCCCGAGTTGGAGGGCATGATAGCATCTCAAAAACATGCCTACAAAGTTGATGCTCCAAGGGAAAAGAAATCTTTTCCGAGAAAAAGAAAACAGCCAAGTGCAGGAGGGAAGCCCAAGAAGCATAAAATCGTCCCTGCAAAAATGGTTGCCATGCCTGTCCGAGCATCACCTCGCTTAGCTTCACTGAAGATCACTCATGATTTAAATACTGAGCCTGAAGATGAACCTATCGGTGTAAATCTTGTCAATGAGGTACAGTCTACTAAAGAAAATCCTACTGATAAGTCACGATTGAACCAAGCAGGCTTTTCCACTGAAATGACGTCTGTTCAAGAAAGGGCTGACAATCAGTTGCTGTCAAGCCAAGCAGACACTGGGAATCACATACGTGTTATGGAGGGGGACACTACAGATTTGTCACAGCTGAGACAAGCTGACACTGTGAACCAAATACTCACAGATCAGGAAAATGCTGTCAGTCAATTACAGTCGAGCCACACAGATTATTTTGTTCAAATACGACCTAGACAAGAATACGTTACCAATTACTCACAATCACAGTTGAGCCGCGCTGCCACTGTGAATCAAATAGAGACTAATCAAAGGAACATGTCAGGTCAGTTGCAGTCTAGCCAAGCAGATTCTCTGGATCAAATACAGACAGAGCAGGAAAGTTCTGCCAGTCGGTTACAGTCAAGCCAAGCAGACTCTTTCAATGAAATACAGACTATACAAGAATACATTACTGAACAGTCAGAGTCACAAGTAAGCCATGCAAATCAAATACAGATTGATCTAGGAAACACTGTCGATCTGTTGCCGTCGAGCCAAGCAGACGCCATATTTCAAATGGAGACTACACAAGAATACATTACCAACCAGTCTCAGTCAAGCCAAGCAGATATTGTGGATCATATGCAGGTTAATCAGGATAACACTGCTAATCAGTTCCATTTGAGACAAGCTGACACAGTCAACAGAATACAAACTATGCAGGAGAGCACCACTGATCAGCCACAGCTCATCCAAGCTTTAACTGTGAATCAAATACAGGTCAATGGGGAAAACACTGCCAATCACGTCCAGTCAAGGCAAGCAGATACTGTGAATCATATACAGCTTAATCAGGATAACACTGTCAATCAGTTCCAGTTGAGACGAGCTGACACAGTCAACAGAATACAAACTATGCAGGATAGCACCGCTGATCAGCCACATCTCATCCAAGCTTTAACTGTGGATCAAATACATGCCAATAGGGAAAACGTTGTCAATCACTTCCAGTCAAGGCAAGCAGATACTGTGAATCATATACAGGTTATTCAGGATAACACTGCCAATCAGTTCCAGTTTAGACGAGCTGACACAGTCAACAAAATACAAACTATGCAGGATAGCACCACTGATCAGCCACGGTTCATCCAAGCATTAACTGTGAATCAAATACAGGCCAATGCGGAAAATACTGCAAATTACTTACAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATTAGTACTAGCAGTAAAAAAAATATTCTACTAATAGTAATTGAGACGAGAGTATGAATACATAAGTCATTGGAATAGAAAATATGAATGTTCTAGTTTATTCTACTTATAAGTAGAGACCACTGTAAGACACCTCATATGAAATATTATATATATAGTTGTAGTAAATGTGTATCTAATTAATGTTTTCTTTGAAAAGGTACATGTTTTGCACATTGATAAAAGTATATATAAGTTCAGAAAAAATATACATCATGTAGATATACCATGTGAACTTAGTTTCAAAAATCTTGACTAGAAATCAAGTGCTGAACTGTCGAGCAGAGGCCCATGGACGATCGAACGAACGTGCAGCAGAGAGGATGCATGGCTTTAGATCGGATCTGTAATATTTGCATTGTCAACAATCCGCACTTTTAATTTCACCAATAAATGTACAAGTCAAAATCTCAATTTTCCAAATCTCAAAAGAAATTGATAGAAAGTACAAGTCTGGAAGCTAATAATTTACTAAAAGTACTTCTTAAAATAAGCAGCAGATCGAAGGGCTGCCGTTTTCATTAATTAGAACAAGGTGAAAGTTACTAGTTTATTAAACTAAGTTTAGTACAATACTCCACAAGGGGGAAGGGGATGAAAACAGCATTAATGAATAAATAATGTTCGATTACATGCCGATGGTCTACTCTAGGAATGCTGCACCAGCAAGTACCTAGTTGCGTGCTTTCTCCCTGATTTTTTTTTTTTTTTTTGAAAAAGGTTTGTGATGGCTTCATCATCCACATCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028184