Os11g0153900

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Revision as of 09:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0153900| Description = Ribonuclease HII/HIII family protein| Version = NM_001072315.1 GI:115484242 GeneID:4349811| Length = 2849 bp| Defin...")
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Gene Name

Os11g0153900

Description

Ribonuclease HII/HIII family protein

Version

NM_001072315.1 GI:115484242 GeneID:4349811

Length

2849 bp

Definition

Oryza sativa Japonica Group Os11g0153900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:2512956..2515804

Sequence Coding Region

2513131..2513215,2513553..2513624,2514408..2514531,2514599..2514686,2514795..2514932
,2515080..2515167,2515256..2515376,2515482..2515662

Expression

GEO Profiles:Os11g0153900

Genome Context

<gbrowseImage1> name=NC_008404:2512956..2515804 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:2512956..2515804 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggcagcggtggcgccggagtgggccaccaaggagccctgcctcatgggaatcgacgaggctgggcgcggccccgttctcggtccaatggtgtatggctgcatgtactgcgctcgttcctaccaagacactcttgcaacccttaaatttgcagattcgaagaccttgaaggaagaacaaagggaggagctgtttgaaagtctaaaagacaatagttcaattgggtgggaagtggatgtcatatgcccaaaggagctatctgctaaaatgttaaaaagatcgaaagttaacctgaatgaaatatctcataactctgcaatgggtctggtcaaaagagctcttgacatgggagttctactagcagaggtctacattgatacggttggagatgcggagaagtacaggatcaaattgactgaaaagttcccaggcatcaaatttgtggttgccaagaaggctgatagccttttcccagttgttagtggagcaagtatagtttcgaaggttaccagagacagagccttgagaaactgggtatttgatgaaacggctcagaatatgcacatgaacactgggtctggttatccaggagatccttccactaaacaatggttagaagatcacaaacatccgatatttggattcccgtctttggttcgttttagctggggaacttgcacgcccttcttcaatgacgcaattgaagttacctgggagtccaatgaacttgaagaagatgcaggtagcaacggtagtgttaagagacaggtcaagctatcaagcttaggctttactggattcaaaaggaagtctgaggagatcgactcaagtgggaaaggccgttgcaagttcttccaggctcgcaaacttgaacttgtcaggaagtttcagtga</cdnaseq>

Protein Sequence

<aaseq>MVAAVAPEWATKEPCLMGIDEAGRGPVLGPMVYGCMYCARSYQD TLATLKFADSKTLKEEQREELFESLKDNSSIGWEVDVICPKELSAKMLKRSKVNLNEI SHNSAMGLVKRALDMGVLLAEVYIDTVGDAEKYRIKLTEKFPGIKFVVAKKADSLFPV VSGASIVSKVTRDRALRNWVFDETAQNMHMNTGSGYPGDPSTKQWLEDHKHPIFGFPS LVRFSWGTCTPFFNDAIEVTWESNELEEDAGSNGSVKRQVKLSSLGFTGFKRKSEEID SSGKGRCKFFQARKLELVRKFQ</aaseq>

Gene Sequence

<dnaseqindica>176..260#598..669#1453..1576#1644..1731#1840..1977#2125..2212#2301..2421#2527..2707#ctcgccccgccccgcccgccgctctcctccgcgccgccgcccgccgccgtctactcctctcccgcgccgccggccgccgtgttccatcctttccccggcgccacaagcttccggcccctagatagcccgcgaagccaagctgccggcccctcgctcgcccgcgcagacggccgagatggtggcagcggtggcgccggagtgggccaccaaggagccctgcctcatgggaatcgacgaggctgggcgcggccccgttctcggtgaccaccctttctcctaagatttttctgttaattttagctttcggttgggcataggttcttgtactgtatctctcgatgaaattttaccctattttccttgttgatgtgttgctccgctttgtattgtttcttaaagctattgttacgcaaatctgcagtaagtagagtttcaagcaaatactgaatctttcttgaaatcttagctcgtgtcggcacgttccgtttctgacatttcccccaacttgtgttgaactgaactcggatctgctcgtctggagcagaaatgttgcaatttgactgaaatcgtgacctctccgtgatgttgctgcctcaggtccaatggtgtatggctgcatgtactgcgctcgttcctaccaagacactcttgcaacccttaaatttgcaggtattcatgtcggttttcctgtctcttagtatatatttagtagtacttcacttcgccttgttgctggtggcgctgcacattactattaactcatgaagtaggataagattccgagatacataattttagtttcatcaacatacaaagtggtgatttggaagttggaacacatacaactatacaaggctaaccagcattgtgcctcatcatgtgttatgacctacttatggaataagaactttggttgacttggccagaaggaaggaaataatcttttcttttaagagcctgatactaattcttacaaagtctgtgcagaactggacttttgaatatactactataggatacaaacatctcaccttttctgctgataatagttgttatgttcttcttggttctctatctcataaaattttctccttccccttcatctcattcttgtaagatttaactgctttcatttccacatacttccaccctattaattcaaaacactacaagcgtcgcttatatgtggtacaatctcgtttttattttgtcataatgcatgaatgctaaacaatagtcagtcaaatctcgaacatgttttggtaattccatcatgtttgcatttaatattcaaatcctatagttggtaaaaaaaatgtgacttcccttgagtactggataatatgaagagtaaaacatgaatagtaactcataagttggcagtcagccataccacgtagagaattttaccaccagtgaacttacttagtttgttgttcttctcctgggcagattcgaagaccttgaaggaagaacaaagggaggagctgtttgaaagtctaaaagacaatagttcaattgggtgggaagtggatgtcatatgcccaaaggagctatctgctaaaatgttaaaaaggtgtatctgacttttgtacctaaactgcaaatctttgttctgtgactaatagtttctttgttttcagatcgaaagttaacctgaatgaaatatctcataactctgcaatgggtctggtcaaaagagctcttgacatgggagttctactagcagaggtatgagcttatattattggataaaagtttatcttgtatgcagttaacctttgtaaacccaaaaaatactcacaaattgtttcaacaattgtctacctccttgcaaaggtctacattgatacggttggagatgcggagaagtacaggatcaaattgactgaaaagttcccaggcatcaaatttgtggttgccaagaaggctgatagccttttcccagttgttagtggagcaagtatagtttcgaaggtaattccatatatgatttttttccaccaattatactttaatgtgtaaactagacatgcatgtatgtagacaatttatgcagcaaacattaacttgtctgagtgtaaaccaattataaagttgtgacctcttgatatgttagtgcaggttaccagagacagagccttgagaaactgggtatttgatgaaacggctcagaatatgcacatgaacactgggtctggttatccaggaggtaatgtattcatcattgtaagtgatctattatcaatgtatatagtcataaagactgttttgttaaagaccttcaattaatggtgcagatccttccactaaacaatggttagaagatcacaaacatccgatatttggattcccgtctttggttcgttttagctggggaacttgcacgcccttcttcaatgacgcaattgaagttacctggtgagttttaattttgaagccttatggtactgtgcgtttcataagacgccgcaaactgtgattctcgcgacaattaaaatttgtgccatatgcaatcatatgtagggagtccaatgaacttgaagaagatgcaggtagcaacggtagtgttaagagacaggtcaagctatcaagcttaggctttactggattcaaaaggaagtctgaggagatcgactcaagtgggaaaggccgttgcaagttcttccaggctcgcaaacttgaacttgtcaggaagtttcagtgatgcgtatcagcttcgttgtctgtactactaactttaagtcagagtagaaggctcttatggggttatggcttgtatttcagctgtgacacttgtgagttcagtataatgaaggctcttatggtgatattgtatttcagctatg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0153900, RefSeq:Os11g0153900