BGIOSGA028216

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Revision as of 07:55, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028216| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028216, complete gene.| tag = P0494D1...")
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Gene Name

BGIOSGA028216

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028216, complete gene.

LocusTag

P0494D11.3

Ensembl Transcript ID

BGIOSGA028216-TA

Ensembl Protein ID

BGIOSGA028216-PA

Length

5085

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:8162238..8167322

Sequence Coding Region

8162238..8162389,8163332..8163501,8163599..8163713,8163799..8163967,8164097..8164231
,8164320..8164639,8164903..8165038,8165135..8165383,8165478..8165698
,8165817..8166075,8166175..8166882,8166993..8167322

Genome Context

<gbrowseImage1> name=IndicaChromosome08:8162238..8167322 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:8162238..8167322 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCGGTGATGGTGAGCTCGGCGAGCGGGCTGCTGGCGATGCTGCAGGAGCCGGCGGCGGAGCTCAAGCTGCACGCGCTCGCCAACCTCAACTCCCTCGTCCACGTCTTCTGGCCCGAGATCTCCACCAGCGTCCCCGCCATTGAGAGCTTATATGAAGATGAGGAATTCGACCAGAGGCAGTTGGCAGCATTGGTTGTTTCCAAGGTGTTTTACTACCTTGGTGAATTAGATGACTCTCTGTCTTACGCACTCGGTGCTGGACCACTATTTGATCCCTCCGAGGGTTCAGACTATGCTCAAACACTTTTAGCAAAAGCTTTAGATGAATATGCCAGCATCCGATCGAAGTCCTTGAAAGCAGCAGGTGAAGGGGATGAAAAAATGGACCCAAGATTGGAGGCAATTGTAGAGAGAATGCTGGATAAGTGTATACTTGATGGAAAATATCAACAGGCCATGGGTATGTCTCTTGAATGCAAGAGACTTGATAAGCTAGAGGAAGCGATATCTCGATCCGATAATCTTAATGGATCTCTTTCTTATTCCATCATTCTATCTCATCAATATGTTAGTCACCGTGAATATCGCTGTGAGATTCTCCGATGTCTTGTAAAAATATACCAGACACTGCCAAATCCGGATTACTTAAGCATTTGCCAGTGTCTTATGTTCTTGGGTGAGCCTGAAACTGTTGGAAACATCTTGGGCAAGCTGCTTTCTGGAAGCAAGGATGATGCTCTCCTTGCATTCCAAATTGCTTTTGATCTTGTTGAAAATGAAAACCAGGCCTTCCTCCTGAATGTGAAAAATCACCTTGACACGCTGAGTTTGCAGACTTCTGCCCAGACTTTACCTAGCGATCAAACTGCTGCTACAGAACCATCTGGAGATGCCCAAATGACGGATGATGCTATCACACCAAATGGAAATGCGCACACTGTAGATCCAAATGAAGTAGCGCACGCTGATAGGCTGACCAAAATTAAGGGGATACTGTCAGGGGAGACGTCTATTCAGTTGACATTGCAGTTTTTATACAGTCATAATAGGTCTGATCTTCTGATTTTGAAGACTATAAAACAAGCTCTGGAAATGAGGAATAGTGTTTGTCATAGTGCAACTATATGTTCCAATGCAATCATGCATGCAGGAACAACAGTTGATACCTTCCTAAGAGAAAACTTGGAATGGCTAAGTAGGGCAACCAACTGGGCTAAGTTCAGTGCAACTGCTGGATTAGGTGTCATTCATAGAGGCCATCTCACACAAGGCAGAGCTTTAATGGCCCCATACCTTCCTCAGAGTGGTGCTGCAAGTGGTGGTAGTCCATATTCTGAAGGTGGTGCCCTTTATGCTCTGGGTCTGATCCATGCAAACCATGGTGAAGGAATCAAACAATTTCTTCGTGAGAGCCTTCGCAACACTAGTTCTGAGGTCGTTCAGCATGGTGCTTGTCTGGGACTTGGACTTGCAGCTTTAGGCACAGCCGACGAGGAAATATTTGAGGATGTAAAGAATATTCTTTACACTGACAGTGCTGTGGCTGGTGAGGCTGCTGGCATTGGCATGGGCTTGCTTATGGCTGGAACAGCCAGTGAGAAGGCTGGAGAGATGCTTGCCTATGCACATGATACACAGCATGAGAAAATTATTCGGGGCTTGTCACTTGGAATTGCATTGACAGTTTATGGCAGGGAAGAGGAAGCTGACACCTTGATTGAACAAATGACTAGAGATCAAGATCCCATACTCCGTTATGGTGGTATGTACGCATTGGCTCTAGCGTACAGGGGAACTGCAAATAACAAAGCTATCCACCAGCTTCTTCATTTTGCGGTGTCGGATGTGAGCGACGATGTCCGGAGGACTGCAGTATTGGCTCTTGGTTTTGTCCTGTACAATGAGCCTGAGCAGACTCCAAGAATTGTGTCTCTGCTCTCTGAATCATATAATCCGCATGTCCGTTATGGTGCCGCTTTAGCTGTTGGAATATCCTGTGCAGGAACAGGATTAAGTGATGCCATCTCCTTGTTGGAGCCTCTTACATCTGATGTTGTTGACTTCGTGCGGCAAGGTGCTCTCATTGCAATGGCAATGGTCATGATCCAAACTAATGAATCATATGACTCTCGTGTTGGAACATTCAGGCGTCAGTTGGAAAAGATCATTCTCGACAAGCATGAGGACACCATGAGCAAAATGGGTGCCATAATGGCTACTGGTATCCTTGATGCTGGTGGTAGGAACGTTACCATCAGGCTTCAGTCCAGGTCAAAGCATGACAAGCTGACTGCTGTTGTTGGCCTTGCCGTCTTCACCCAGTTCTGGTATTGGTACCCGCTGACATATTTCATCAGCCTGGCCTTCTCTCCGACGGCTTTTATTGGCCTCAACTCTGACTTGAAAGTGCCGAAGTTTGAGTTCCTGTCAAACACTAAACCATCGCTCTTTGATTACCCAAAGCCGACAACCCAACAAACCACGACTGCTTCAGTTAAGCTGCCTACGGCCATCCTATCAACATATGCCAAGGCAAAATCTAGGGCAAAGAAGGAAGCCGAAAGCAAAGCTCAGGAGAAAGCAGAAGCACCACCAAGTGAAGATGCTTCTACTTCAATGCAGGTCGATGGTGTGGCGGAGAAGAAAGCCCCTGAGCCCGAACCGACCTTCCAGATCCTGACTAACCCGGCCCGGGTTGTCCCGGCCCAGGAGAAGTTCATAAAATTCCTGGAGGGCGGCAGGTACGAGCCTGTGAAGCTGGCGCCCTCCGGATTTGTCCTCCTACGGGACCTCAAGCCCACCGAGACGGAGGAACTAGTCCTCACCGACGCCCCGGCAACTCAGGCGACGAACGCCGCAGCCGCCACCGCTGGCCAGCAAGGCTCAGGCGCCGCCGCCATGGCCGTCGACGAGGAGCCCCTGCCACCCCAGCCATTTGAGTACACCTCGTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAAVMVSSASGLLAMLQEPAAELKLHALANLNSLVHVFWPEISTSVPAIESLYEDEEFDQRQLAALVVSKVFYYLGELDDSLSYALGAGPLFDPSEGSDYAQTLLAKALDEYASIRSKSLKAAGEGDEKMDPRLEAIVERMLDKCILDGKYQQAMGMSLECKRLDKLEEAISRSDNLNGSLSYSIILSHQYVSHREYRCEILRCLVKIYQTLPNPDYLSICQCLMFLGEPETVGNILGKLLSGSKDDALLAFQIAFDLVENENQAFLLNVKNHLDTLSLQTSAQTLPSDQTAATEPSGDAQMTDDAITPNGNAHTVDPNEVAHADRLTKIKGILSGETSIQLTLQFLYSHNRSDLLILKTIKQALEMRNSVCHSATICSNAIMHAGTTVDTFLRENLEWLSRATNWAKFSATAGLGVIHRGHLTQGRALMAPYLPQSGAASGGSPYSEGGALYALGLIHANHGEGIKQFLRESLRNTSSEVVQHGACLGLGLAALGTADEEIFEDVKNILYTDSAVAGEAAGIGMGLLMAGTASEKAGEMLAYAHDTQHEKIIRGLSLGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYALALAYRGTANNKAIHQLLHFAVSDVSDDVRRTAVLALGFVLYNEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSDAISLLEPLTSDVVDFVRQGALIAMAMVMIQTNESYDSRVGTFRRQLEKIILDKHEDTMSKMGAIMATGILDAGGRNVTIRLQSRSKHDKLTAVVGLAVFTQFWYWYPLTYFISLAFSPTAFIGLNSDLKVPKFEFLSNTKPSLFDYPKPTTQQTTTASVKLPTAILSTYAKAKSRAKKEAESKAQEKAEAPPSEDASTSMQVDGVAEKKAPEPEPTFQILTNPARVVPAQEKFIKFLEGGRYEPVKLAPSGFVLLRDLKPTETEELVLTDAPATQATNAAAATAGQQGSGAAAMAVDEEPLPPQPFEYTS</aaseq>

Gene Sequence

<dnaseqindica>1..152#1095..1264#1362..1476#1562..1730#1860..1994#2083..2402#2666..2801#2898..3146#3241..3461#3580..3838#3938..4645#4756..5085#ATGGCGGCGGCGGCGGTGATGGTGAGCTCGGCGAGCGGGCTGCTGGCGATGCTGCAGGAGCCGGCGGCGGAGCTCAAGCTGCACGCGCTCGCCAACCTCAACTCCCTCGTCCACGTCTTCTGGCCCGAGATCTCCACCAGCGTCCCCGCCATGTGAGTTGCTCCACCCCCACCCACCTTCAGCTGTAGTTTTCCCTCCCCGCCGGCCCGCTGCGCCCGATGCGGCGTTTCGCGCGATTCGGTTCGATTCGTGGAGTGGGGGGTTGGGGTTTGGTGCTCTATGTATGTGATGATGATGATTTGGATGAGAGGTGGGGTTCGGCTAGGAAGGTGCCGTGTGGAGGGAGGATTCATGCGATTAGTGTCGTTTGGCCTGGTTAGATTCGATCTGGCGATTTTTTTGGATGAACCCTAGGTTGGTTTGATCTGTTAGGCTGGAGATTTCGGGAGGGGATTATAATGGGCGGTTAGTTTCACTGGTACTAGAAAACCTAGGCTTTGTGTATGGATTATAGATAGCTCAAACTTCCCTAACTGTTGTGGTTCATTCATGTATTATTCTTCGAGGAGTTGCTGTGGTCGAGAAAAAATATTAATTTTTTAAAAATAATTTGCGTTTAGGCTCGGATTGCCAAGGCTTTTGTTTGAAGGGTTCTAATGAAGCATAATTTTAATCTGAAAACGAGCAGGTGGAGCCTAGGTTGAGACTTCTTTTTTTCTGTTTATTATGGTTGGTTTGAGGAATATGCATAATCCTTGACTTTTAAGTGTCTGAATTGCAAGACTATACGCAGGAACATTTTGTTTGATCTTTAGCGCTTGTCCTGTCAAGTAAAAACATTGAGCTAAGACATGTGTCGTCTCGTTTCTTGTTTATGATTTGTTCATGGGATTTAATGGGAGCTAGATACATCAGAAGAGGCATGTCCATTAAATGTTTTGGCAGTTGCAATTTGGTATTTTAGTTTCTGGAAATTATGTTCTTTATTCATTGTCACTTAATAACTTGGTAGAACTTAATATTTTCAAGGACTTCTCTATTAAGCATGAAGTGTTTCTGGTTACTTATTTTATAATGTTATATACTTGTTACAGTGAGAGCTTATATGAAGATGAGGAATTCGACCAGAGGCAGTTGGCAGCATTGGTTGTTTCCAAGGTGTTTTACTACCTTGGTGAATTAGATGACTCTCTGTCTTACGCACTCGGTGCTGGACCACTATTTGATCCCTCCGAGGGTTCAGACTATGCTCAAACACTTTTAGGTGAGGAATTGACTAAATTCATTGCAATCTTCTTATTTTCATGTTCCAAAGAAACAATATTGACATAGTTTTAAAATTTGTTTGTTCCTTTCTTCAGCAAAAGCTTTAGATGAATATGCCAGCATCCGATCGAAGTCCTTGAAAGCAGCAGGTGAAGGGGATGAAAAAATGGACCCAAGATTGGAGGCAATTGTAGAGAGAATGCTGGATAAGTATGATAGAATCCTCTTATATCTTCTAGTAGCTCATCTGTAATTAAATGCAGTTCTCATCTCATTGATACGGAAACTGTTTCAGGTGTATACTTGATGGAAAATATCAACAGGCCATGGGTATGTCTCTTGAATGCAAGAGACTTGATAAGCTAGAGGAAGCGATATCTCGATCCGATAATCTTAATGGATCTCTTTCTTATTCCATCATTCTATCTCATCAATATGTTAGTCACCGTGAATATCGCTGTGAGGTAAGATTACATCATGGCAGATTTCAATTGTAAAGTCTGTCTCTTAGATTTCTTATTGGTATATACAGCATTCTTCATAAATTTTGGAATGCCATAAAATGACCAAGAACTTATGTTTGATCTATTCAGATTCTCCGATGTCTTGTAAAAATATACCAGACACTGCCAAATCCGGATTACTTAAGCATTTGCCAGTGTCTTATGTTCTTGGGTGAGCCTGAAACTGTTGGAAACATCTTGGGCAAGCTGCTTTCTGGAAGCAAGGTATGCTGGAAATATCTTGTGTTTTTTTTAGTTGTTTAACTGCTGCTTAGTGTGTTTATTTGTCCTAACATGTGCTTTTGCTCTACAGGATGATGCTCTCCTTGCATTCCAAATTGCTTTTGATCTTGTTGAAAATGAAAACCAGGCCTTCCTCCTGAATGTGAAAAATCACCTTGACACGCTGAGTTTGCAGACTTCTGCCCAGACTTTACCTAGCGATCAAACTGCTGCTACAGAACCATCTGGAGATGCCCAAATGACGGATGATGCTATCACACCAAATGGAAATGCGCACACTGTAGATCCAAATGAAGTAGCGCACGCTGATAGGCTGACCAAAATTAAGGGGATACTGTCAGGGGAGACGTCTATTCAGTTGACATTGCAGTTTTTATACAGTCATAATAGGTACTACCTCTATCCCAAAATATAGCCATTTCTAGAACAGTACCTTGTCTCAAAATAAAGTTATTTCTCCAACTACCTCCTCTCAACCAATCACACATTTTCTCCATCATTCCCACCTACTTTCTTAATATCCGTGCCAACCTCAAAAATGCTTTACACTTTGGCACGGAGGAAGTAATGTGATAATATCTGACAAAATTATTGCAGCTGGTCATGCATTTAAGTTTTGAATCTTATGTTGATTTTGGTAATTGATTTGACAGGTCTGATCTTCTGATTTTGAAGACTATAAAACAAGCTCTGGAAATGAGGAATAGTGTTTGTCATAGTGCAACTATATGTTCCAATGCAATCATGCATGCAGGAACAACAGTTGATACCTTCCTAAGAGAAAACTTGGTACATTTCATAGTTTACCTATTTGTTAATGCAGTTCTATGCTCATGCATTTTTCTCCCTTTGTGATCTTCATTTGCATATAACCATCTTTTACAGGAATGGCTAAGTAGGGCAACCAACTGGGCTAAGTTCAGTGCAACTGCTGGATTAGGTGTCATTCATAGAGGCCATCTCACACAAGGCAGAGCTTTAATGGCCCCATACCTTCCTCAGAGTGGTGCTGCAAGTGGTGGTAGTCCATATTCTGAAGGTGGTGCCCTTTATGCTCTGGGTCTGATCCATGCAAACCATGGTGAAGGAATCAAACAATTTCTTCGTGAGAGCCTTCGCAACACTAGTTCTGAGGTATTTTTTCAGGGTCATGGTCTCTTATTTTGTTTAGACAGTCCCTATCACTGTCATGAAAAAATATTCTAAACTTTCAAATATTATTGTACAGGTCGTTCAGCATGGTGCTTGTCTGGGACTTGGACTTGCAGCTTTAGGCACAGCCGACGAGGAAATATTTGAGGATGTAAAGAATATTCTTTACACTGACAGTGCTGTGGCTGGTGAGGCTGCTGGCATTGGCATGGGCTTGCTTATGGCTGGAACAGCCAGTGAGAAGGCTGGAGAGATGCTTGCCTATGCACATGATACACAGCATGAGAAAATTATTCGGTAACTATTTTTTAAACTCTTGGCAAGCAAGTTCCCACTGTAATCTAGTACTAGGAATTTGTTTCTCAAGACGGTAAATATGTTCATGTTCTGATACACTGACTCCTCTTTTCTCCAGGGGCTTGTCACTTGGAATTGCATTGACAGTTTATGGCAGGGAAGAGGAAGCTGACACCTTGATTGAACAAATGACTAGAGATCAAGATCCCATACTCCGTTATGGTGGTATGTACGCATTGGCTCTAGCGTACAGGGGAACTGCAAATAACAAAGCTATCCACCAGCTTCTTCATTTTGCGGTGTCGGATGTGAGCGACGATGTCCGGAGGACTGCAGTATTGGCTCTTGGTTTTGTCCTGTACAATGAGCCTGAGCAGGTTAGCTTTACCTTATTGATTCTTTTTATTGTCAAGATTCTTGTTTGATTTGAGTCACTTAATTTGAGCCTGACTTGCCTAGAATTATTTTCAATGCAGACTCCAAGAATTGTGTCTCTGCTCTCTGAATCATATAATCCGCATGTCCGTTATGGTGCCGCTTTAGCTGTTGGAATATCCTGTGCAGGAACAGGATTAAGTGATGCCATCTCCTTGTTGGAGCCTCTTACATCTGATGTTGTTGACTTCGTGCGGCAAGGTGCTCTCATTGCAATGGCAATGGTCATGATCCAAACTAATGAATCATATGACTCTCGTGTTGGAACATTCAGGCGTCAGTTGGAAAAGATCATTCTCGACAAGCATGAGGACACCATGAGCAAAATGGGTGCCATAATGGCTACTGGTATCCTTGATGCTGGTGGTAGGAACGTTACCATCAGGCTTCAGTCCAGGTCAAAGCATGACAAGCTGACTGCTGTTGTTGGCCTTGCCGTCTTCACCCAGTTCTGGTATTGGTACCCGCTGACATATTTCATCAGCCTGGCCTTCTCTCCGACGGCTTTTATTGGCCTCAACTCTGACTTGAAAGTGCCGAAGTTTGAGTTCCTGTCAAACACTAAACCATCGCTCTTTGATTACCCAAAGCCGACAACCCAACAAACCACGACTGCTTCAGTTAAGCTGCCTACGGCCATCCTATCAACATATGCCAAGGCAAAATCTAGGGCAAAGAAGGAAGCCGAAAGCAAAGCTCAGGAGAAAGCAGAAGCACCACCAAGTGAAGATGCTTCTACTTCAATGCAGGTAAGAGCTACAGTGCTAACTACCTACCTTATTCCTTTTCATGTCTTTGCTACACAATGACATGTTATAGTCTCCAAATTACTCATGCTGGTCTCAATCCATGAATTCAGGTCGATGGTGTGGCGGAGAAGAAAGCCCCTGAGCCCGAACCGACCTTCCAGATCCTGACTAACCCGGCCCGGGTTGTCCCGGCCCAGGAGAAGTTCATAAAATTCCTGGAGGGCGGCAGGTACGAGCCTGTGAAGCTGGCGCCCTCCGGATTTGTCCTCCTACGGGACCTCAAGCCCACCGAGACGGAGGAACTAGTCCTCACCGACGCCCCGGCAACTCAGGCGACGAACGCCGCAGCCGCCACCGCTGGCCAGCAAGGCTCAGGCGCCGCCGCCATGGCCGTCGACGAGGAGCCCCTGCCACCCCAGCCATTTGAGTACACCTCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028216

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA028216&oldid=34473"