BGIOSGA028218

From RiceWiki
Revision as of 07:55, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028218| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028218, complete gene.| tag = OsI_282...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028218

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028218, complete gene.

LocusTag

OsI_28287

Ensembl Transcript ID

BGIOSGA028218-TA

Ensembl Protein ID

BGIOSGA028218-PA

Length

5208

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:8197711..8202918

Sequence Coding Region

8197711..8197817,8198206..8198261,8200800..8201230,8201709..8201807,8202736..8202918

Genome Context

<gbrowseImage1> name=IndicaChromosome08:8197711..8202918 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:8197711..8202918 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTTATACTTCATCATCAAATTGTGAACCATTGGATGAATGCATTAGATCGCTTCTCAGACGTTGGATGGAATAACAGCATAGAGCCCAACCCATCAGTCACCGGGTGTGCTTTTAAAAATATTTTTGTGAAGATAGAAATTGATGGCTTGGAGCTCACACGTCCGGTGAATTCTGAGAGAGATGAAGGTGCGGAGCTGTACTGTGAGAGGAAGAAAAGAGTGAAGTGGCATCAGCTGTGGCCATCAAGTGCCAAGGATATGAAGGTTGTTCCAGTGCCGCGTGCAAGAGCAGCTCCAAGAAGGCACATATGGATACCAGTGATTCTAATTCTTGTTGCCGTCACCGTGCTATGGATTTACTTATACCCTCCACAGGATTATACCTATCCTGTTAGGGATTGGTATCCTGTTAGGGACTGGTTTCCTGCAGAACCTGCCCGGGAACTGACCGATGAGGAGACTGCCGCTCGAGTTGTCTTTAGACAAATCCTCTCAACGCCTCCATTCCCATCCAGGAACCCCAAAATCGCTTTCATGTTCTTGACTCCTGGCAAGTTGCCATTTGAGAAATTATGGGAGTTATTTTTTAAGGGCCATGAAGGGAGGTACACTATATATGTTCATGCTTCACGTGAGAAACCCGAACATGTCAGTCCTGTATTTGTTGGCCGAGACATACACAGTGATAAGATGTGTGTCACCATCCTCGAATGGAGGGCATTCATCTCGGGGGAATTGCGAGGCCGAGCTGAGCACTTGGTACAACACCTCGATGCGCTTGACGGTGAGATTGAGGGCTCGGACCTGCTACAAATACTCGAAAGCGGATGCCTGGACTTGGGTAACGTGATCGGGCAGGCCATTGAGCTTTGA</cdnaseq>

Protein Sequence

<aaseq>MLILHHQIVNHWMNALDRFSDVGWNNSIEPNPSVTGCAFKNIFVKIEIDGLELTRPVNSERDEGAELYCERKKRVKWHQLWPSSAKDMKVVPVPRARAAPRRHIWIPVILILVAVTVLWIYLYPPQDYTYPVRDWYPVRDWFPAEPARELTDEETAARVVFRQILSTPPFPSRNPKIAFMFLTPGKLPFEKLWELFFKGHEGRYTIYVHASREKPEHVSPVFVGRDIHSDKMCVTILEWRAFISGELRGRAEHLVQHLDALDGEIEGSDLLQILESGCLDLGNVIGQAIEL</aaseq>

Gene Sequence

<dnaseqindica>1..107#496..551#3090..3520#3999..4097#5026..5208#ATGCTTATACTTCATCATCAAATTGTGAACCATTGGATGAATGCATTAGATCGCTTCTCAGACGTTGGATGGAATAACAGCATAGAGCCCAACCCATCAGTCACCGGGTAAGTCTCTTCGCCTCCTCAGTGCCAAATGTAGCCCACATGAACACATTGGCCTATCTCCACACACATCTACATGCATCCAGCCCCTCAATCCATATAAAAGAGCTTTATGGCTGAACGCCCCTTCAGTTCATATGTGCTATCTAAATTATCTATAAATTTTGGATAGGGTTGCTAAAAAAAATTTCTCCAAGAAAGCTATTTGTTTCTTCTGTTTTTTCTTGAGATTGTACCTCCTATCTAACAAATTGATGTTAACCAAGTCCCACAGCAACACGCGGGGTATCCTCTAGTTATTTTTATTTTTCATAACCGTTTAGTGGAGTGGTATAGGGTGTATTTCACTTGGTTTCAAATGTTATTGCTCACAATTTTTATTCACACGCAGGTGTGCTTTTAAAAATATTTTTGTGAAGATAGAAATTGATGGCTTGGAGCTCACACGTAAGCAAGGTAATAAATAGCAAACAGGTGGTTGGTAGCAAATTAGTGTCTGTGATAATTAATAGTGGTTGCTATTGCGGACGCTAAGTTTCAATAGCGGAATTCGATTGTAACCATAAATGTAGATTATATACCAATACTAATACCAAGATTACTTAAAATTTAGAAAATTATAAGAATTATAAACAACATAAATAAACAATATATTAAGAAGCCACATTAAGTTGTCATGAACATATATGAACAATAACTGTGCAATAGTGACCACACAAAGCCAATAACATATTACAATAGCAATAGCTTAATTCCGACCGATATCTCAATCCACTATCGTTATACCCACCGCTACAAACACTATTTATTATTCTGCACGTATGTACGTCACCGTTACAAACACTACTCCCTACGTCCTTAAATATTTAACGCCGTTGACTTTTTTAAACATATTTTGACTGTTCGTTTTATTAAAAACTTTCGTGAAATATGTAAAACTATATGTATACATACAAATATTTTTAACAATGAATCAAACGATAGGAAAAAAATTAATAATTACTTAATTTTTTAATAAGAAAAAGGTCAAACATGTTTAAAAATTTTAACAGCGTCAAATATTCAAGGACGGAGGGAGTATTTATTACTCCATCTATTTTTCATAGTCATATTTCATCTTGGCACATAGACCAAGGATAAGTAATTCTATTTATCATCCATTTAAACATGCTACTAGTCATTTCTCGTAAACAAACGATTCATTGATATTTACGTTTCTCGATGTCCATATAGCCAATCATGTGTGAAAAAATAGAGAGTCATGCATTAAATCCGAGAAAGTCATTAATATGATAGGTTATTAGAGTGAAATATGCCTATCAAAAATAAAATTTTTAGATTTTAAAATATAACGGAGTATTTTACACGCATATGCATTTAGTGTGGTGGCTGTGCATACATTTTCCACTACTTCATCGAAACGAAAATCCGCATGCGAGAATTACAAGAACACACTTTTTGAGCGGGGACGATGCCCATTTTCCATTTTCCATTTCCCCCCTTGCCCGCGCGCGCGCGTTCTCCGCAGCGGCCGGGAAACAGGAGGAGAAAGAAGAAGAAGAAGAAGAAGAAGAAAAAAAGGAGCAATTTTTCTCGGCCTCCTCCTCCTGCCCTGCGCCACTCACTCCACCCGGATCCTGCATGCGCACGCCGGGCGCTTCCCTCTCGGATCGGCCAATCGGACGCACAGGTATGGGCACACCGCGTTTCTTTTGATTCCCCGCCTTGTGATCAATGATGCTTAATTGATGGAGGTTCTTGGAGATGGTCGATTTGGTCTAATGATTGATTGAATCGTTTTGGGGAGGATGGATGGATTTTGCCTGGGGGTTAGAGGGGGATGGATTGAGCTGCGTGATTTTGCCACATGATTCTGAATCCTTGAGGGGTGTGAAATTCTGGTGGATTTTGGTGTGCATTGGTGTTCCTGGGTATAAAGATGTCATCTTTAGGTGAATGCATATTGCATATGCTAGATGAACTGTTCGTCTTCTTGCTTGTTGTTTTTTCGGCAAGAGGGGAATTTGGGGATGTAAGAAATCTGTGATTCCCTTCAATGTTTGGTTCATTTCGCGATTGCATACTTGCAAATTTATGGTTGTTTACGCACATGTCTAAGGAGTTCTGAATTCCTGATACATATTGGGACCATTTGGGATATGACACATCGTATCACACGTTTTGTTTGATTAGAAGAACACAGACATTTTAATTCCCAAGACAACTATATATTATTCTCTTTATATATGATTCTGAACAATTCTTGGCATAAGGGAATATGCAGTGGTAGAACATGAGCTATTGAAGGTTATACCAGAAGGGGAGCAAATGATGTATACAAGTATGGGCACTTCAATAGTAACATTCCAGCTGAATCGACCTATTTAGATTGCTCATTACTACAGTTATCCCACATGATACCTTGGTAGCCATGCATTACTACTGTTTGGTTTGCTTTCCGCGCTTTTAGGTGTGCAGCATTCTATTAGCCTGCATAACGCTCTACTTGTCATAGACATAGCTCAATCATATCTGTGTTGCACAACTTATTATCTTCCGCAAAGACTGGCACAACTTACCCAGGGGAGGAACAGAAAGTGAATTTTGAGTAATTCTCATCTCTATTGAATATTGATGACCGCAATATGAGAATTCAATCACGTGGAAATGTAAATTCCAAGGTTTCCAATATTTGGTTCTTTTATAGAAGTACAAACATGTATAGTGAAATCTGCAAACGGATTGACCTGTTTATGGACGTTTGCTGATAAGCAACATGCATGATTTCGTCATCCATTTTCCTATTTGTAGAACAGGTCAAATCTTCTGTAAGCAATATTAGTTTCCTTTTCATAACCAGAGTGAATCATGTTATCAATTTGATTTGCAGTGGTATGTCTCATAATTCAATTGACATCGCCCCATTTTTGTTCTGCAGAGCACTTGCAGAAGCAAGGTGGAAGCTGTGTTAAGATTGTTTTCTAGGTCCGGTGAATTCTGAGAGAGATGAAGGTGCGGAGCTGTACTGTGAGAGGAAGAAAAGAGTGAAGTGGCATCAGCTGTGGCCATCAAGTGCCAAGGATATGAAGGTTGTTCCAGTGCCGCGTGCAAGAGCAGCTCCAAGAAGGCACATATGGATACCAGTGATTCTAATTCTTGTTGCCGTCACCGTGCTATGGATTTACTTATACCCTCCACAGGATTATACCTATCCTGTTAGGGATTGGTATCCTGTTAGGGACTGGTTTCCTGCAGAACCTGCCCGGGAACTGACCGATGAGGAGACTGCCGCTCGAGTTGTCTTTAGACAAATCCTCTCAACGCCTCCATTCCCATCCAGGAACCCCAAAATCGCTTTCATGTTCTTGACTCCTGGCAAGTTGCCATTTGAGAAATTATGGGAGTTATTTTTTAAGGTACACCATGAGTTCCCCCTTTTTTGTGCACTCATGCGTATGTACTATATCATGATTTCTGTTACTGATACTGAGTTTGTTATTCCTGGTGTACAACCTTTGTGGGTTTTATGAAGTAAATAAAATGAAAAACTTAAAAATAATGGTTGTTGATTTGTTCTGTTGCCACTCACCGGTTATAAGGAAGACAGTTGAGTTGAGTGGATTGGATTGAATTGGTTGGTATCAAAGGCACATATATCGTTTTCCTTTGAAGCATTAATAGTTAATAGTCATGCAAATTGAACATAATAGGGATATAAATTTTATTCTACCCCCATAAATATTGGGCCACATTTGTACCTTTCTACTTGATCTTTCATGCCATGAAGCATGCCAGTTTGCTTCCTTTTAATTTCCTTTTATGCGTGGTATTAGACAATGTCATACACCTTTATTCGATTTGCCTTTTCTGTGGCATTTCCCATAATTTTTGCAGGGCCATGAAGGGAGGTACACTATATATGTTCATGCTTCACGTGAGAAACCCGAACATGTCAGTCCTGTATTTGTTGGCCGAGACATACACAGTGATAAGGTAATCATTTTCTCAGTATGAAGCCTTGGTGAACTTGTAAGGCATGTGCATTTAGGACTTCTGAGGTGGTAAGATGCAGAGAATTATCCATATTTCATTCAATTGTGCTACTCACATAACAAGGTTCTCTCCCATATTGTACTGGTAATATATTCTTTTCCTCATGATCCTGCTTACACTAAAATTTCATAGGGTAATGTAATCTATGCCACGAGCTAATTGGAAGGAGGGATTCAACAAAGATTGTATTAAAAAGAAGTAGCAGGACGCGGTATTGGACCTTGTCGGCGCCGCGGAGCCGTGATTAGCGATGCACCCATGAGGCGTAGTGGCATCCCCTCATGACATCTTTCCCTCCCTCGAGGAGCAGCTCGTCTTCTAGCTGAAAATCTGGATACAAAGCACGAAATTCGTCCAGGCACATCCAAGAAGCCTCTGCCGCCGGCTTATCTTTCCATTCCACCAAAACTTCACGAACACCTCGTGCCAAATGACCGAGGAACGGCTGCTGGTTGCAGACAAACCCGACCATGTTGCGTCGGAGGCAAGGCAGAGACACTTCAGGCGGCTTGAGCAATCCAACGTGAAACACATTGTGGAGTTGAGCCCCAGGTGGTAGGAGAAGCCGGTAGGCTACCAAGCCAATTCATTTGACAATCTGATATGGGCCAAAAAATTTAGGTCCCAACTTGCCGCGCCCTTTAACGCCGAGGATGATGTAGCCGAGTGGGCATAGAAGACGATGATGAATGCGTGCGCACCGATGGTGACGTGCTGGGGTGGGCACTGTCCTTGCGAGTTGACGCGGTCGACGTTCGCCACTGCGGCGCTGAGGCCGGAGTGAGGTTGGAGGGGAACGTTTGCCCGATGCACTGCGCAGTCGTTGATGAAGTTGTGGGTGGCGTGACGACGAGTGGTGGCGATGAAGATGTGTGTCACCATCCTCGAATGGAGGGCATTCATCTCGGGGGAATTGCGAGGCCGAGCTGAGCACTTGGTACAACACCTCGATGCGCTTGACGGTGAGATTGAGGGCTCGGACCTGCTACAAATACTCGAAAGCGGATGCCTGGACTTGGGTAACGTGATCGGGCAGGCCATTGAGCTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028218