Os09g0315700

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Revision as of 07:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0315700| Description = Similar to Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| Version = NM_001069382.2 GI:297609214 GeneID:4346...")
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Gene Name

Os09g0315700

Description

Similar to Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)

Version

NM_001069382.2 GI:297609214 GeneID:4346699

Length

5104 bp

Definition

Oryza sativa Japonica Group Os09g0315700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:9258007..9263110

Sequence Coding Region

9260766..9260975

Expression

GEO Profiles:Os09g0315700

Genome Context

<gbrowseImage1> name=NC_008402:9258007..9263110 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:9258007..9263110 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcactctaaatttcaaatgacctttacaggaaatccaagagtcacaccagaggttacaagggatgtctgcttgcttgcaagaatgatggcagcaaacttgtattgctcacaaattgaggatctcatgtttgaggtacaatttgatttgactattttaaagtacagtaattattatgcatatgattgttggatattgataaagctttaa</cdnaseq>

Protein Sequence

<aaseq>MHSKFQMTFTGNPRVTPEVTRDVCLLARMMAANLYCSQIEDLMF EVQFDLTILKYSNYYAYDCWILIKL</aaseq>

Gene Sequence

<dnaseqindica>2136..2345#accaagttcgcagcagcaatcgtcttcctcttcttcttgttgttgttggcgatgtcggcgatgtcggcggcgggcggcggcggcggcgtggggaaggtggagcggctgtcgtcgatcgacgcgcagctgcggcagctggtgccggcgaagctgtcggaggacgacaagctcatcgagtacgacgcgctcctcctcgaccgattcctcgacgtcctccatggcctccacggcgacgacctcaaggatctcgtaatttatccaacccttttcttcttcttctttttctttttcttttttctttttttggttgcaatcttggattggagcaatactatgtatgagtgtgagtatgtgaatccagctgagcttttcgttccagggcaacacgtggcattgttttgattgggatttttagttcagtaggttttacttttaagtgtgcagattgggtttggatttgttactactctttaatctttagtggggggtaaatttgtgtatggttaattctgtgctttattaattattagtatgggtttagtgtaaagcttgaatcttggaggtgaattagtgttctctgatttgttcagttgtttgtgtgctgatttagtgttctgggtactgagactgagcataccagtggattctgttcttgattaggccccttcttttttttttcctaaactcgtggttagcttaggggttaataatagctgatctgtaaattgtgtcagtcaaactttacctcatctgtttgggatctcttgttgaatcaattaaaataactgtttttttttttactgacaaggatctatactagtaatgaagcctgcagagtttgaccgtatcaattaattttggttctcagtaaaaacacactgttcaagtatgcatggggttatgggtgtgttgtttctcaggaaacagagttgattgcagagtcttcttcctttatataccttcctgtaaactgaacctgaatccatacaaataattttagcaaatgtacaaataattttgattctttccgtgttcatcttttcattgttgtttattacgatttaattagaagggattgccacctttaaactgaatttgcgtgctacatgataggttcaagaatgctatgaggtggccgcggagtatgaaacaaagcacgacgtgcaaaagctcgatgaactcggcaacatgataacaagcttggatccgggcgactcgattgttattgcgaaagccttttcgcacatgcttaacttggccaacttggctgaagaagtccagatcgcatacaggaggaggatcaagctcaagaagggtgatttcgctgacgaaaactcggcaatgactgaatccgacattgaggaaacactcaagaggcttgtttttgacctgaagaaatcccctgctgaggtctttgatgccctcaagagtcagactgttgaccttgttttgactgcacatccaacacagtctgtgaggaggtcactgctccagaaacactccaggttagtcggcgaaacagcgcgatttgctcacaccacatgatgtagtttctagtctctaatctcgattgtaacattcttatttcaggattcggaactgtctggttcagctttattcaaaggatatcactccagatgacaagcaagagcttgatgaggctctccagagagaggtacttgttgcaaacattatgttcatttacaaaatgctttgcattattttcagcatgaggtcagaaagatccataatccattcttatgcttcacctgacatcctattattttagatccaagctgcctttagaaccgatgagatccgaagaacacagcccactccccaagatgaaatgcgtgctggcatgagctacttccatgaaacaatatggaagggtgttccaaagttcttgcgccgtgtggatactgcattgaagaacatcggtatcgacgagcgtgttccttacaatgctcctcttattcagttctcgtcttggatgggaggagatcgtgatggtgagaaacatatctattttgttgttggttcttagcactatgccttataaataattacagcacaatgaatcctctttagatgttgtctttaaattactaccacttaggagataccatgtctgtatgcactctaaatttcaaatgacctttacaggaaatccaagagtcacaccagaggttacaagggatgtctgcttgcttgcaagaatgatggcagcaaacttgtattgctcacaaattgaggatctcatgtttgaggtacaatttgatttgactattttaaagtacagtaattattatgcatatgattgttggatattgataaagctttaaatgatttcagttatctatgtggcgatgtaacgaggagctacgctcacgagctgatgatctgcaccgctcttctaagaaggacgcaaagcattacataggtacagttacagcattttgggcttaactaatgatgtaggttgctacaagaggccatttttggaaaaaaaaaaagattctaattgttgtttttttgttgaatcttggatgcagagttttggaagaaggttcctctgaatgaaccataccgggtgatactgagtgatgtgagagataagctttacaatacacgtgaacgatcacgggagttgttgtccagcggatattgcgacatccctgaggaagcaactctgacaaatgttgagcaggtatagaaattcccagcaaaaatcaataatttccatgtataacatatgttcaacgattttttaacacatatttatcttctgtttcagctattggagcccttggagctatgctacaggtcgctgtgcgcctgtggtgaccgtgccatcgctgatggaagccttcttgatttcttgcgccaagtttccacctttggactctcccttgtgaggcttgacattaggcaagaatccgacagacacaccgatgtccttgatgccatcacgacatacctgggcataggatcttaccgtgagtggtccgaggaacgccgtcaagagtggctgttgtccgaactcaacgggaagcgaccattgtttggcccagaccttcccaggacagatgaggttgctgatgttctagacacattccatgtgattgccgagctccctgctgacagttttggagcctatgttatttccatggcaacagccccctcggatgtccttgctgttgagctcctccaacgcgagtgccatgtcaagacaccgcttagagttgtccccctgttcgagaagttggctgatcttgagtctgcccctgcggcattgaccaggctcttctcaataagttggtacaggcagaggatcaatggtaagcaggaggtcatgattgggtattcagattcaggcaaggatgctggccgtctctcggcagcttggcagatgtacaaggctcaggagcagctcgtcaaggtagcgaaggatttcggggtcaagttgacgatgttccatggacgaggtggaaccgttggtaggggcggtgggccgactcaccttgccatcttgtctcagcctccagacacgatcaacggatcgctccgtgtcactgttcagggtgaagtcattgagcagagctttggtgaggagcacttgtgtttcaggacactgcagcgtttcaccgctgctacacttgagcacggcatgcatccacccagtgcaccgaagccagaatggcgagctcttcttgatgagatggctgtggtggcaaccaaggagtatcgatccgtagtgttccaagagccacgctttgtggagtatttccgccttgtaagtcctttctcccatttatcatcttcaattcttcatcagactagtaaaacctctaaaatagattgaaaagtgaaaacttaaacttaaaagtaattatttgctttgtgcaatgatttaccatgacaatcttatactttgatgaaataattgtaagatagtgaactaatgcaacttaggagtagcataccgtgccactgttatttttgtgatggaacagtgtaaactagactaaagataaccttggagccattgaattagacttattagactttttcaaaattataatttgtgttgtttgtggttggcaggcaacacctgagacagagtatggaaggatgaacataggaagcaggccatccaagaggaagccgagtggaggcattgaatcactccgtgcgatcccatggatcttcgcatggacgcagacccgcttccaccttcccgtctggcttggattcggtgctgcattcaagcacgcccttcagaaggacatcaggaatctccacatgctccaggagatgtacaacgagtggccgttcttcagggtcactctcgacctgattgagatggttttcgccaagggtaatcctggcattgctgccctttacgacaaactcctcgtttctgaggatctacagccactgggtgagaagctgagagccaactatgtagagacacaaaagctgcttcttcaggtatgttcactaaaaacttcaaccagtacaattccaacttgtacagtactctgaactcctgattactccttgttatcatacaaaagatagtacaatgattggcttttttttttttacttcaggttgctggccatagggatcttcttgaaggtgacccctacctgaagcagcggctccgactccgcgacgcctacataaccaccctgaatgtctgccaagcctacacgctgaaacggatccgcgacccggattaccacgtcacgctgcgccctcacctgtccaaggaggtgatggatgggagcaagccggccgcggagcttgtgaagctgaacccgggtagcgagtacgcgccagggctggaggacaccctcatcctgaccatgaagggcattgctgcagggttgcagaacactggttaagacttaggagagattgcctgagtgccatcttttttgtatctttcctttgatcatttgccttgggccctgttattttggatactgctgaatattggtctccttactgagggaggggtaacaaataccggcgtttttttgcctatgtatattattactgaaataaaaggagaccatgatcattataataacct</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0315700, RefSeq:Os09g0315700