BGIOSGA028250

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Revision as of 07:55, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028250| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028250, complete gene.| tag = OS08G02...")
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Gene Name

BGIOSGA028250

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028250, complete gene.

LocusTag

OS08G0239300

Ensembl Transcript ID

BGIOSGA028250-TA

Ensembl Protein ID

BGIOSGA028250-PA

Length

9171

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:9072156..9081326

Sequence Coding Region

9072156..9072381,9072541..9072562,9079268..9079385,9079697..9079787,9079961..9080050
,9080147..9080250,9081186..9081326

Genome Context

<gbrowseImage1> name=IndicaChromosome08:9072156..9081326 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:9072156..9081326 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCACCAGCGTTGCTCTACCCGACCATCCTCTTCCTCGCAGCGGCCGCCGTCGGCGCCGCCGCTCCGCCGCACTCGCAGTGTCTCGACAACCCGCCGGACCTGACGACGGCCGGTGGCGGCGGCGAGGCCGGCGTGGTCGTCCACGATCTTGGAGGATTCGAGGCCTACGTCACCGGCGCCGTCCATTCCAGGCGGACCATCCTCTTGGCCACCGACATCTTCGGATTCGAAGCGCCATTGCTGAGGAAAATAGCTGATAAAGTTGGTCTAGCCGGATATTACGTCGTTGTGCCTGATTTGTTCCATGGACAACCCTACACATTTGACCAGAACCGTACAGAATGGCTCAGTGCTCATTCTCCGGTAAAAGCAGCTGAAGATGCTAAACCAATCTTTGCTGCTCTAAGCAAGGAAGGGAAATCTATTGTTGGAGTTGGAGGTTATTGTTGGGGCGGGAAGTTCGCAGTGGAGGTAGCAAAAACTAACGAGGTTGAAGCAATTGTCATCTCCCATCCTGCAGCGGTGACTGCTGATGACATGAAAGAGGTCAAATGGCCCATTGAGATCCTTGGAGCTCAGAATGACACAGTTACACCACCAAGATCAGTTTACCAGTTTGTTCATGCCTTGCGTCAAAGAACTGATCAGATTGATTATTTTGCCAAGGTCTTTCAAGGAGTGAACCATGGCTTCGCTTGCAGGTATAACGCCAGCAACCCTTTCGAGGTCAAAAAAGCTGAGCAAGCACTTGCGTTAATGCTTGACTGGTTTCACAAACACTTGAAATGA</cdnaseq>

Protein Sequence

<aaseq>MAPALLYPTILFLAAAAVGAAAPPHSQCLDNPPDLTTAGGGGEAGVVVHDLGGFEAYVTGAVHSRRTILLATDIFGFEAPLLRKIADKVGLAGYYVVVPDLFHGQPYTFDQNRTEWLSAHSPVKAAEDAKPIFAALSKEGKSIVGVGGYCWGGKFAVEVAKTNEVEAIVISHPAAVTADDMKEVKWPIEILGAQNDTVTPPRSVYQFVHALRQRTDQIDYFAKVFQGVNHGFACRYNASNPFEVKKAEQALALMLDWFHKHLK</aaseq>

Gene Sequence

<dnaseqindica>1..226#386..407#7113..7230#7542..7632#7806..7895#7992..8095#9031..9171#ATGGCACCAGCGTTGCTCTACCCGACCATCCTCTTCCTCGCAGCGGCCGCCGTCGGCGCCGCCGCTCCGCCGCACTCGCAGTGTCTCGACAACCCGCCGGACCTGACGACGGCCGGTGGCGGCGGCGAGGCCGGCGTGGTCGTCCACGATCTTGGAGGATTCGAGGCCTACGTCACCGGCGCCGTCCATTCCAGGCGGACCATCCTCTTGGCCACCGACATCTTCGGTTAGTGCATGCCTGCCTGAGCTGCCAGCTTATCTGTCTTTGAAATATTCTTTGATGATATATTGTGGATTCATTTATTACTAACCATTAATTAATCTTGAATTCTTGCTGTTGCATGTGAGTGGTTGCGTGGTTGTTAATTGTGGGTCTCTACTTCAGGATTCGAAGCGCCATTGCTGAGGTACAATCTTCTTCTTCGTTTGTATAATAGGGAAATTGCTGTATGTACGATAAACTTGTTATGATTTTGGTACGATCCAGTCATGCATCGTACACTTGCATGAACATTAGCATTCACTTGTCATGCAAGTTACAACAATAGAAAGGTGACTGGTTATTTGAAGGGATCGGATATGGTTTTTGGTCAACTCTCTCTGTCTTTTTTATAGTGATCTTGCGAGAAATTAAGTCACACATAATATTCAATATTACTGATTATATATCTGCATGATTTATCAGTATAAGACTTGGATGGCGACAGGCCACTCCTGTATCGAGAATCATTATGTACTACTCCCTCTGTTCCATATTATAAGTCATTTGATATTTTTCTCAGTGAAACTATTTTAAGTTTAATCAAATTTATAGAAGAATATACTAATATTTTTAATACAAAACAAATTAACATATTACCAAAATATATTTAATGTTAAATTTAATGAAACTAATTTAGTATTGTAGGTGTTGCTAACTTTTTCTATAAATTTGGTCAAAACTAAAGAACTTTGAGTAAGAAAAGAGTAAAACAACTAAAAATATGAAACAAAGAGAGTAGTAAATATCGATATATATGCCAAGATACTCTAACGTCCTATTATTCCTATATAATACACATCTATCTATTATATTATTAAAGGAATAGAAAAAGGAGCCTCTACGTTGGCTCTCATGGCCTAGAAATTCTCACATTAATCGGAGAAAAAGAAAAAGTAGAATCCATATAAAAATACAATTTAGAAATAGCTGAAATTCGGAATTAAAAAATAAGGAATATAGAAGAGGAGACTAGAGTCCATATAGAAATACAATTTAGAAATAGTTGAATTTCGGAATTAAAAAATAAGGAATATTAGAAGAGTAGACTAGAGTCCATATAGAAATACAATTAGGAAATAACTGAAATTCTGAATTAAAAATAAGGAATATTAGAAGTAGAGTATATAGTCCATATAGAAATACAATTAGGAAATAACTGAAATTCGGAATTAAAAATAAGGAATATTAGAAGTAGAGTATAGAGTCCATATAGAAATACAATTAGGAAATAACTGAAATTCAGAATTAAAAATAAGGAATATTAGAAGTAGAGTATAGAGTCCATATAGAAATATAATTAGGAAATAACTGAAATTCAGAATTAAAAATAAGGAATATTAGAAGTAGAGTATAGAGTCCATATAGAAATACAATTAAGAAAAAAATAGCAAATTTAGAATTAAAAAATACGGAATATTAGAAGTAGAGTATAGAGTGCATATAGGAATTTAAAACTAACTAAAATTTGGAATAAACATAATAAAATTAAAAGTAAAGTTTAGAGTTCGTATAAAGATACAATTTACAAATAACTAAAATTCCAAATTAAGAAAAACATGGGAAGAAGAGTTTAAAATCAATATAGGAGTACAATTTAGAAGTAACTAAAATTCGAAATTAAAAATTAAAGAATACTAAAAGATGAGTTTAGAGTCCACATAGAAATACAATTAGAAATAATAAAAATTTAAAAATAAAAATAAATAATATTGGAAGAAGAGCATAGAGTCTATATAGAAATACAATTTACAGAAAATTTGGAATTAAAAAAAAGAAAATATTAAAAGATAAGTCTAGAGTCCATATAGGAATATATATAATTTACAAATAACTAAAGTTCGATATTAAAAATAATTAATAACTAACACGTATATAAAATATAATATAAATATTACCCATTAGTAGTTTTGTAAAGTTATTGCAAAATTTAAAATTATGTTGTCATTTTAATATATTTGAATAATATAATGAGGAAACATATATGCTATTATATGAGAGAAAATATAATGATACTAGCCGCGCAATCTGTGCAGGCCACTGTGCTAGTTTTGAGAGTAATTTCTTAGGGTTTTCAATATGTTATCCCCACATGGAGATAATCAGCAGCATAGCGACATATATATATTGGAATTGTTTCATATTCTATCCTCCTACAGCTAATCTCTACTACTTAAAAAGGTAAGACATTTCCGTTGTCCGTACCGATAAAAACCACGCGAAAAAAAGGTTTCCGCATGTAAAAGAAGCAAAAAAAAAAGTGTGAAAAAAGTTTCTGCCCGATTAAAAAAAATCATCTGTATAAACCGTTGTCCAAAAAAAAAAAACAATGTTAGTGGGAAAAAAAGTTCCGTCGTCCATACTGGAAAAAGGAAAAAACGTGCAAAGAAAAGGTTTCCATCTTCCGTAAAAAAGAGTAAAAAGTAGTGCGAAAAATTTTTTGTTCCGATTCTTAAAAAAAAACCCTTCTCCCATAAAAAAGGAAAAAATTATAGTGCGAAAAAAAAAAGTTTCGTTCCGATTCTAAAAACAAAGTCCGTATAAACCGGTCATCAGAAAAAAAAAGATTAGTGTCCGATTCTAAAAAAACGGGTTACTTTTCCAAAAATTCCTAAAAAAATAGGTTGCCAGAAAAAAAATGTTCCTCACACCGTTAAAAAAAAGTCCGATTCTAGTTAAAGAAACTGGTTCGACATTTTCAGCTTTTCCAAAATTCCTCAAAGTATATTTGAAAATTTAAAAGCAAATTCAATTTTCCCCTTTTGAATAATTCTTTTATTCATTCAAATTATCATATATCAAAATCCACCTAAACATGTCAAAATTTATATAAACCGCGTGAGGAAAAAACATCGCCATTTATAAAATAACCGATTTGAAAAAACTGTCTGACTCAACGTGAGAAAAACGCCACCTTTTATAAAAGAATCTGGTTTGGCACCATGCAATGCGAAAAAACTGTCTAAATTTAGAAAGAAAAAACATCCAATTCCGTGAAAAGGATTCGTAACGTTTGTATTGTTCATCGTCTACCACGTCGGTTTGGTTTTTTTAAAGCGTAAGTCGAATTCTGACATCTGGAACTAAGACAAGTCTTGCTTCGGTTTTTTTTTTTCTGAGAACGAGATCAAATTAATGGACGTTTGGGTTAGATAGGATCCATCGATTTTTTCCATCTACACGGCTTCTCTTTCCTCATCTATTCTCTTGTATTGATAGCCCTGCATGTCTGTGTAGGCAATTATCATACTACCATAGCTACTATTCTTTATAACATATTATATGGAAATAATATTAAAAATAAATATGTTTTTAATTGATATTTAGAGAAGAGTGCACGTGGCTCTATTTTGTGTAGACTTAATTATGCGAGGCAATATAGGATTTGATTGATCCTAATTTTGATTGCAAGAATAAGACTGAAAAGTATTAATTTTAGATTTTTATGCATGTTGTTAGATGAACAATCCAATTCTTTTGGGTAAAGCAAAACATTGGTAAGGTTGCCAGCACCGAGGTTGGGCCATTGATTAAAGATGTTCCACTTTTCTTTATGATATGTTAAAAATATTATCATTGACACTATGATATGACATTCACTGCTACGGGATGGGTTTTTCTGTGCGGTCAAAAAAAATATCCACGTGCGGATGAATGGCCCGCACGCAACACTTCGTCTGCGAAAGTCATGATTTTTGCGTGCGGGTGGCCCTCCCACACGCGAAAATCGGATTTTTCCGTGCGGTTGCTTATGTCGCTCGCACAGAAAAATAAAAATCCAGAAAAAAATAAAATTCACAAATTACCGAACCCTAACCCTAGATCCGCCACTCCCCGCCGTCACCGCTGGCCGGCTCCAGGCGGGGGACTGTGTCGCCGCGAGATCCGTGCGGAGTGCAGCCGCCACAGCCGGATGACGGATCCTGGCGTGGGGAGGGCGGTGCCGCTCCTGGCCGCCTTCTCCTCGTCGTCGTCGGCGGCCGCATGAGGTGGGGAGAGCGGCGCTGCTCCCGGCTGCCGCCTCCTCCTCTTCAACGGCAGCGGCGGCCACCGCGCCGCCTCCACCAGCAGCCGCGACGGGCGCCTCCACGTCGGCGCATGGCAGCGGCGCCACTTCCTCCTCCTCCTCCTCATCGGCGGAGGCCTCCGCGCCGCCGCCCGTCGGATCCGCGCTCCCCTCCATGCCGCTGCCCGCCGGATCCACCCTCCCGTCCGGCTGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGCGCGCCAAAAGGAGACGAGAGGAGAGGCGTGAAAGAGAGAGGAGGAGAGGAGAAGAGAGATAAGAGGGGAAGGGATGTGAGGAGAAATTAAAAGAGATAAATGAGGAAAAATTTTGAAATGGGTGGGAGGGAAAATAGGGAATACTATTTTCGCGTGCGGCTCTCTTAATAGATACGCACGGGAAAATCGGCTCATTTTCCCGTGCGGTCCGTTTAGGAGGACCGCACGAGAAAATCGATTTTCCCATACGGGCAACAGCCCAGCCCCGGTTCCCCTATTTTTCCGTGCAGTTCCACTTAAGAACTGCATGGAAATAAAAGGGGGTAACGTCCACGAAAATCTATCGTTTAGTAGTGATTATCATGAAAAGTGTGAGGGTTATGGATAAGGTATACCCTCTACCCTTGGATACACGTTGTATACTGATACGGTATACCCGCGCCTATACGGATATTTCCTATGTACGTTAAGGAAATTCGTCACGAGATAGATGCGGAATCCACAGATAGAAGGAGTCCTACTCAGACAGAACTGGGTCGTTACTGTATCGTGTGGGGTCCGATGTCTCCGAGTTCTACTTGGAGACCAACTGACCTGCGGTATAAAAAGGACCACCCCGGGAGGACCTAAGACATCAAATCTTACCGCCAACACATCCACCACAGCCTACAAAGCCGGAGCCTACGGGAGCCAAGTCGCCGGGTGATTTAGTTGAACCAACTCGACTACGATCTCGTCGGTATCATTGAGTTCCACTATTCCCTTTCTAATATGTGATTTTCATTATATAATCCCATATCACTAGATTAGAGCTATTACCTATCAAGGGGCCTGAACCAATATAATCCCTGTTTCCTGTTTGCTTGATGTCGTACTACGTAGATCCTCATATCAGCGTACCCCAATACCCTCTATATCCGGTCTACGGGTATCCCCCGTCGACAAAAAGCATATATTGTTATTAGAATTTTTCACCCGTTATAACGCACGGGCATATTTGCTAGTAATAAAAATATACCAAGAGGTTCAAATATACCATTTAATAGTGTGGTAATCATGGTTTAATATCTTTAACTAGTACTTAGATAGCACATATAATTGGACAGCAATTTAAAATGGGCGAGTATATGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGGAGGAGAGAGAAGAGAGATAAGAGGGGAGGGATGTGAGGAGAAATTAAAAGAGATAAATGAGGAAAAATTTTGAAATGGGTGGGAGGGAAAATAGGGAATACTATTTTCGCGTGCGGCTCTCTTAATAGATACGCACGGGAAAATCGGCTCATTTTCCCGTGCGGTCCGTTTAGGAGGACCGCACGAGAAAATCGATTTTCCCATACGGGCAACAGCCCAGCCCCGGTTCCCCTATTTTTCCGTGCAGTTCCACTTAAGAACTGCATGGAAATAAAAGGGGGTAACGTCCACGAAAATCTATCGTTTAGTAGTGATTATCATGAAAAGTGTCAGGGTTATGGATAAGGTATACCCTCTACCCTTGGATACACGTTGTATACTGATACGGTATACCCGCGCCTATACGGATATTTCCTATGTACGTTAAGGAAATTCGTCACGAGATAGATGCGGAATCCACAGATAGAAGGAGTCCTACTCAGATAGAACTGGGTCGTTACTGTATCGTGTGGGGTCCGATGTCTCCGAGTTCTACTTGGAGACCAACTGACCTGCGGTATAAAAACGACCACCCCGGGAGGACCTAAGACATCAAATCTTACCGCCAACACATCCACCACAGACTACAAAGCCGGAGCCTACGGGAGCCAAGTCGCCGGGTGATTTAGTTGAACCAACTCGACTACGATCTCGTCGGTATCATTGAGTTCCACTATTCCCTTTCTAATATATGATTTTCATTATATAATCCCATATCACTGGATTAGAGCTATTACCTATCAAGGGGCCTGAACCAATATAATCCCTGTTTCCTGTTTGCTTGATGTCGTACTACGTAGATCCTCATATCAGCGTACCCCAATACCCTCTATATCCGGTCTACGGGTATCCCCCGTCGACAAAAAGCATATATTGTTATTAGAATTTTTCACCCGTTATAACGCACGGGCATATTTGCTAGTAATATAAATATACCAAGAGGTTCAAATATACCATTTAATAGTGTGGTAATCATGGTTTAATATCTTTAACTAGTACTTAGATAGCACATATAATTGGACAGCAATTTAAAATGGGCGAGTATATGCGCCATGATAAGAATTCCATATTGTGCTTACTTAAACTAAAATATGTTTTTCATGACACATATACTATTGTACATCATTGTATAGTGTGCACATCTGCTTAGGGACAATTAATATATGTAAGATTGTGAACCCAATGTTAATTCAGAACTTATTATGTGATCTTCCATTGCCAGGTTGTACGTCAAGCTATTTCTCCATGGCTTGCAGAAACTCTGTTTATCTGCCAGTACTTTATTTTAATTTTACATTTGAAAACAATGTAAAAGCAGATGTTTGATTATAAGGTTGCTGACAATTTCAGGAAAATAGCTGATAAAGTTGGTCTAGCCGGATATTACGTCGTTGTGCCTGATTTGTTCCATGGACAACCCTACACATTTGACCAGAACCGTACAGAATGGCTCAGTGCTCATTCTCCGGTAATTCATTTCACCATATTAATTAATTTGATCTAATATTCCCCTGTAACTTTACCTTGAAATCGTGATATATGATTGAGACGATAGAGTAAAAGAAAACTCGACAGCTGCACCAAGGATATACACAAAGCCACAAAACAAAACTTTATCCCAAAAATGTAACTTATGCGGGATGCTTATAAAGATAATATGTTAAAGTTCTAAGAAAAGATAATATATAAACAGTTATAAACGATTCAAGATAATAAATTAAAGTTCTAAAGAAAGAATATATAATTAATATTGACAAGCATTTTCAATTGATCTTGCAGGTAAAAGCAGCTGAAGATGCTAAACCAATCTTTGCTGCTCTAAGCAAGGAAGGGAAATCTATTGTTGGAGTTGGAGGTTATTGTTGGGGCGGTGAGTCACATCTATCAATCAATATAAGAAAATGTAGTTGTAATATCCTGAACTTAATGGTCAAAATCTTTGATATGGAATTCCAGAATATATAATTCCTAACCCCATATATTCAACAAGCAGTTATTTAATTCATATTGAAGTCTCTGAAAACAAATTTGTTTTACTGACAGGGAAGTTCGCAGTGGAGGTAGCAAAAACTAACGAGGTTGAAGCAATTGTCATCTCCCATCCTGCAGCGGTGACTGCTGATGACATGAAAGGTGAACTTTCTTTCTTTTGTTGCGCTGTTCGTTGTTACAATAGAAAATAGCTAATAATTGTTTTCTTATTCCAAGCTCTCCTTGATTAATTAACAGAGGTCAAATGGCCCATTGAGATCCTTGGAGCTCAGAATGACACAGTTACACCACCAAGATCAGTTTACCAGTTTGTTCATGCCTTGCGTCAAAGAACTGATCAGGTGAGTTCCTGTTGATTTTATTGACGGTTGGTCCCAAATACATCCATGTTTTTTACTTCTAAACTCCATCTCGCTCTTCAAATACTTGTTACTGGATTCTATTTACTCTCTTTGTTCTAAAATAAACAAACCTTAGATAAAATAAGTCTTTACCTATTACAACGAATTTAAACAGGCAATTGTTCAGATTTGTTGAATAGGTAAAAGCTCGTCCTATTTAATATTTGTTTATTTTAGGATGGAAGAAGTAGTTTTTGACGTTGACCATTCATCCTATTTGCAAAAATAATTATATTACATATTAACGATGTGTGTTCTGCCATAATACAACTACATAAGTTAACTTCATTAATCTTTAAAAAGTTATTAATCTGAAAAAATGATAGTCAATAGCGACAAGCAAAATAATAGTTTCTAAATACAAGTTGCATGTACAAAACACACAAGCTAGCTCTCACTAACTGAAACTGAACCAGTGTTTAATATGCTAAAAAAATTGCAACTGTAAACATAAAAGAGAATTAATTTTTACTGATGATGAGATGTTAAAAGACCTTGCTAGCTCTATTTGCATTTTTTTTTTGAGAAAGAATGCTAGCTCCAATTTGGAAGAATAAGTGCTATAACATTGCATATTACTTCCTTCGTTCCAAAATAAAAAGGCAAAATCATACCTTTTTATGTTGTAGTTAACAATCATCTCCATCTTCCCTAAATTTGTTTTTTTCAATCCTCCACCCCAAGATCTTTAATCACATTAGATGCATGCATCGTATTATATTGAGGTAATCCAAATGAGAAGGTGATAATATTTTTTTTCTTGGTTTTCGTGTTAGTGGTGGTTTGTACCTTATATTTTTATATTTTATGATTGCGGGAATAATATATTATGTTTTATAACTAAATAACCTCTTATATATGAGTTATTGTTGCAGATTGATTATTTTGCCAAGGTCTTTCAAGGAGTGAACCATGGCTTCGCTTGCAGGTATAACGCCAGCAACCCTTTCGAGGTCAAAAAAGCTGAGCAAGCACTTGCGTTAATGCTTGACTGGTTTCACAAACACTTGAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028250