BGIOSGA028268

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Revision as of 07:56, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028268| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028268, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA028268

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028268, complete gene.

LocusTag

OSJNBB0070J06.9

Ensembl Transcript ID

BGIOSGA028268-TA

Ensembl Protein ID

BGIOSGA028268-PA

Length

4545

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:9384873..9389417

Sequence Coding Region

9384873..9385003,9385411..9385590,9387155..9387224,9387313..9387414,9387520..9387675
,9388654..9388752,9389089..9389209,9389311..9389417

Genome Context

<gbrowseImage1> name=IndicaChromosome08:9384873..9389417 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:9384873..9389417 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCACCACCGCCTCCTCCTCCGCCGCGGCGCGATGCCCGTCCCCCCGCCGCTGCCCCCGCGGACGCCGCCGCCGGGGGTCGCGCGCCCCTTCGCCTCCCTCCCTCCCCCGCCGCCTCTCCAGTCACGCAGGGAGGTGCATGTTTGGTATGTTTGCCCTGATGAGCTGAATGATCACTCCCACCTGGATATGTACATGGAACTCCTTTCTCCCTCCGAAAGGAAGAACGCGCTGTCTATGAACGGGCCGAGGCTGCAGAAAGATGCTATGTTGTCGCGTGCATTGCTGCGCACTACCCTCTCAAGATGTATACTAGATACAAATTCTAAAATTGATCCAAGATCATTTGAGTTTAAGAAGAATAAATTTGGTAAGCCTGAGATATTGTGGCGGTCTGATGATAGCAATATGGAGTGGCCTTGGCATTTTAATATTTCACACACATCTTCTCTGATTGCCTGCGGCATTGCGATGGATGCTCCTATTGGCATTGATGTTGAAGAAAAGAAGAGAAAGACAACCAAGAGTATTTTATCTCTTGCTCGCCGTTACTTTACCCCTTCAGAAGTTGATTCTCTAGCTAAAATTGCTGATTCTGATGCTCAGCAAAAGGAATTCATAAAACTATGGACCCTAAAAGAAGCATATGTTAAGGCTCTTGGAAGGGGGTTTTCAGGTGCTCCTTTTAATAGGTTTTCAATCCAATTGAAAACAAATAGCCGAATTCAGATTACTAAGGCACCAAAAGTGTGTAATGATTCTGATTCTGGTGATTATCTTTCTGAGAACTGGCGGTTTGCACTTACAGAGCTAAACAGTTCTTATTATATGGCGGTTTGTATAGAGGACAACTCAAGAGGTTCTGAAAATGGTTCAGTACCACTAGGATTGAAAGTATGGAAGACCGTTCCATTCATAGAAGATACACTTGTTTCTGGAACAGATGCCGTAAAACTTATTACGTGA</cdnaseq>

Protein Sequence

<aaseq>MHHRLLLRRGAMPVPPPLPPRTPPPGVARPFASLPPPPPLQSRREVHVWYVCPDELNDHSHLDMYMELLSPSERKNALSMNGPRLQKDAMLSRALLRTTLSRCILDTNSKIDPRSFEFKKNKFGKPEILWRSDDSNMEWPWHFNISHTSSLIACGIAMDAPIGIDVEEKKRKTTKSILSLARRYFTPSEVDSLAKIADSDAQQKEFIKLWTLKEAYVKALGRGFSGAPFNRFSIQLKTNSRIQITKAPKVCNDSDSGDYLSENWRFALTELNSSYYMAVCIEDNSRGSENGSVPLGLKVWKTVPFIEDTLVSGTDAVKLIT</aaseq>

Gene Sequence

<dnaseqindica>1..131#539..718#2283..2352#2441..2542#2648..2803#3782..3880#4217..4337#4439..4545#ATGCACCACCGCCTCCTCCTCCGCCGCGGCGCGATGCCCGTCCCCCCGCCGCTGCCCCCGCGGACGCCGCCGCCGGGGGTCGCGCGCCCCTTCGCCTCCCTCCCTCCCCCGCCGCCTCTCCAGTCACGCAGGTGCGCCCCGCCCTCCCTGCTTCTCCTTTGTGAGGGGAAGCACTGCCCTTCTCTCTGGTGGTGGTGGTAGATCTGGTGGGATGCAGGTCGGGAGTGGGAGAATCTTGGGGAGGCTTAGAGCTTAATCTCCTTCATTTGCTGCGCTCCCCAGATGCTGTCTTCAGGCGCAATGATGATTAGCTTGCTACTAGTACTACCTAACTATTTTGATTGTGGGTTATTGAATTGCTGCTATTTTGATTTTTTTTTTGAGGGCATGAACAGTCATCAACAACTCAAGAAACAAGCTGAAGATGTAGTACCACTTAGTGTATTTTTTTTCTCTTCTGTTGGGGGAAGGATGTGATTTTGGTGAGAGAATGACCTGTGCCTTTTCTTTTTTACATGTGGGAATGGGGATGTTGCAGGGAGGTGCATGTTTGGTATGTTTGCCCTGATGAGCTGAATGATCACTCCCACCTGGATATGTACATGGAACTCCTTTCTCCCTCCGAAAGGAAGAACGCGCTGTCTATGAACGGGCCGAGGCTGCAGAAAGATGCTATGTTGTCGCGTGCATTGCTGCGCACTACCCTCTCAAGATGTATGTAACCATCAACTGTCTCTCGAGTCTCGATGAGTGCATATCTTTCATTTTTGTTTTCATGCATGTTGTTATCATTTAATAAAGCATTTTGGTGTTTAGAATTCTTCAATTCAGAAATTATTGACTGATTATGCCAGATTTTACATAAGACTTGTTCCTGTAGTAACCCTGTGTCTGATTATGGGACAACACTTTCTTAATCCTTACTAATGATGGCAAGAATTAGGCCTATTTGGAGCAAAAATTGTGCTTCTAACACGAAAATTGAGCTGTTTTATACACTACAGTTTAGATGCAATCAATTGTTTCATGCAAACTTTGCTTGAAAACTGGACTATTAGCCTGCACCTTTCATTGTGTATTCATGTCTGTTATATTCCCAAATTCATATTCAGGATCAATCGTGTAGATTTCGCCCTGTTGTGTCAACTTATATAGCTTCATTGCTTAAGTAACAACCTAGGGCCTGCTGGCTATAGCCAAATACTCATGATCCAGTGGCCTCAACTTGCAAAGGCCCTAAGTACTGATGCATATGGAACATGATATGATATAAACACGATAAAGTGTAAATGTTGCTCAATATCATTGGAAGATCACAAATTGGGATATACCGTCTGTCATGAGCATTGGGCTGTAAGGCCAAGGCCCATAGGCAGCCCATACCAGTTAAGTTAGAGATAAGATTATTAGTTAGTTAGTGATAAGATTAATTCCTTACTTAGGGGTTAAGTTATACCATCTATATAAGGATGTGATTGTGGCTATTATCAATTAAGTAATGAATATCAATTAGTCTAATATCTCCCTCCTAATAATGTTCTTCTCCCTAGCCTAAATCTACATCCCTTCTCCAGGAGCCGAGGCCGCCCGGTTATCCTCCTGGTGGTGGTTATCCCGTCATGGCCTCGGGTCGTGACATTGCCCCATGTGTTATTGACAATTTTCCCTTGGGCCCCAAATTTGATTTGCGCATTGTATGTTTGATTTACAACTGTTTGCGATGGGACTGAGCTAATCCCATTTATTATAAATGAAAGTTATGAAATGATACTAGCACTCCCCTGATCCCAATTAGGTGTTTTATACAATAACCAATAACTAGGAGCACCTAGCAAATAGCGTGCTGCCCTCATTCAAATCCTTTATTTACCTTTTTTTTAGCATAAAGGGTTTATTTACCAGTTGTTGCTCTTGGAATTGTGTATATTGCTCTTGTTTAGAGTAGTAAATGACCATGTAAATAAAACTTGTCACTAAAAAGCAAGGGGTATATAACAGCTAAATTGTGAGAAGTCATCTTGAAGTTTGAAATTGTAGAGTAACACATATGCAGGAACAAATTTGAAAGCTAGATTGACATGTATTCGGGAACAGATGGGATATTGAAATAGGACAATGAGAATCATCATTTATTCAACCTGCCATATGAAAATTTCTGTTTGAATTTATGCACTATCTTGTCTACAAAAAGCATACTTTCTTGTTATTAGTTAGCTTCAAACATATCATGGGATAGCACTACAAGATTACTGATATGATTACTGCTTGTTTGTTTGGACTAGACTAGATACAAATTCTAAAATTGATCCAAGATCATTTGAGTTTAAGAAGAATAAATTTGGTAAGCCTGAGGTAAGAAGTTGCTCTTTACAATGTTTTGATTTTAGAGATCAAAACTTCGAAAATTTTTGTCTTAGATTATTTTTCCTTGTTTAATCAGATATTGTGGCGGTCTGATGATAGCAATATGGAGTGGCCTTGGCATTTTAATATTTCACACACATCTTCTCTGATTGCCTGCGGCATTGCGATGGATGCTCCTGTATGCTCCTTTTCCATATGACCACTAAAAAAGGGAGAAAAGGAAATCTTTGTACTTTTGTTCACGTGAAAATAGTTTTTTAATTGTTGCTCTTATCAATTTCAGATTGGCATTGATGTTGAAGAAAAGAAGAGAAAGACAACCAAGAGTATTTTATCTCTTGCTCGCCGTTACTTTACCCCTTCAGAAGTTGATTCTCTAGCTAAAATTGCTGATTCTGATGCTCAGCAAAAGGAATTCATAAAACTATGGACCCTAAAAGTATGCGAGTCTCTCGTTGTCCTCATTTATTATTATTTCTTTTGCAGTCATTGATAGTGCTGATCAATCTCTTTCTAGAACATTGAGTGGTAATGGTATTTATTGTCCTCTACTTTGGAATCAGTCCATTGGATCTCACTCAACTATTGCTGTAGTTTAGTTTTCAAGTTTCAACCCCTGAGCTCCAAAAGTGGGTATCCTATCCAACACTCCTGAACTATCAAAACTGCCACTAGGTTGGTTTATTAGTTGTTTTCATCACTTTGATATGATATCAGCCAGCACATGACTGGACTGCGGTGCAACTTCATCTTTCAGCGGCCATGAGCTGCTTGAAGTGTTTTCTTTGGGAAGTTAGATCTGTTATGTGTGAGATGAGATGCTGGCACCATCTGGATGGCAAACATCTAATAAACAAGCCTTGGGGTGAATGAGTTGTTGACAGATGAGATGAGGGTGTCAACTACCTGGTTTAAACAGACTGATTTGTTCTTCTTTCTAGTTGTATGCTAGAGATCAACTGACAAGATCGCTTAATCTTATACAGCCGCAAAGTACACTGTAACTTACTGTGCTGGTTTTATGCAATAGACAAGTTGGTAAATATATCATACCTAGGGCAAACAGTTTAGATGCTAACACCGTTGGATGTGTTTTAAATGATGATTGACAGGGGAGGTAGTGGTTTTATGAACAATTCCTCTGTGGAACACTAAATTGTTGAGGACGCCTTCTCACCATTTGAATTTAGTTAATTGGAATATCGTAGAACAGTTAACGTGGAGAGGTAGCAACAAGAAATATGAATTTGGTGAAAATATTTTAAAGTGCACAAATCAAAATGGGTTCACATAAATTTCTGGATATAAAATCGATCCATGTAGAACATAGAGAGGTTATTAACACTGATTTGGCGATATGATGTTGCAGAAGATATGATTACATGGATTACTTATTTCTTATGCCTTGAACTTTTAGGAAGCATATGTTAAGGCTCTTGGAAGGGGGTTTTCAGGTGCTCCTTTTAATAGGTTTTCAATCCAATTGAAAACAAATAGCCGAATTCAGATTACTAAGGTATGTAACTGTACTTTCTTCTTTCTTGTTATCTCATGTACACCAATGTGAAGTTGAGAACCAGGATTGTGCAAATGGATAAAATATAACATGAATTATCTTAGCACACTGTTGTATGACACTCCTGGATCTCTAGCATATGTTATGGCTTAACTGTCAGCTGGAAAATTTCATCTGGAAAATTTCATCCTGGATCTCTAGCAAATTTCATCTGGAAAATTGTCTTAGGTTTTTATTGCTCTGTTTCTTCAACTTATAATAGATCATTTTATACCAACGAAGCAAACACTTGAACATAGCGATTAATCTGACTTGATATCCATTGAATTCCTCCAGGCACCAAAAGTGTGTAATGATTCTGATTCTGGTGATTATCTTTCTGAGAACTGGCGGTTTGCACTTACAGAGCTAAACAGTTCTTATTATATGGCGGTTTGTATAGAGGACAACTCAAGAGGTTTGTACTTTTTGTTTTCCATAAGTAGGAGAGATTTGTGCAGAACTTTTTTTCTCTCTTGTTCTTACAATCACTGCATTATTTATTGTTTTATGTTGCAGGTTCTGAAAATGGTTCAGTACCACTAGGATTGAAAGTATGGAAGACCGTTCCATTCATAGAAGATACACTTGTTTCTGGAACAGATGCCGTAAAACTTATTACGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028268