Os11g0155500

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Revision as of 09:01, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0155500| Description = Amino acid/polyamine transporter I family protein| Version = NM_001072321.2 GI:297611264 GeneID:4349818| Length = 81...")
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Gene Name

Os11g0155500

Description

Amino acid/polyamine transporter I family protein

Version

NM_001072321.2 GI:297611264 GeneID:4349818

Length

8173 bp

Definition

Oryza sativa Japonica Group Os11g0155500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:2579797..2587969

Sequence Coding Region

2579797..2580238,2581664..2581886,2583224..2583575,2584296..2584527,2585085..2585662
,2587793..2587969

Expression

GEO Profiles:Os11g0155500

Genome Context

<gbrowseImage1> name=NC_008404:2579797..2587969 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:2579797..2587969 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaagggcgcgctggtggtgcaggtgatggacgactcgtcgaacggcggcgtcggcgccgccgccgccggcggctcgttctcgagcctgcgcgcctacggccgcgcgctggcgcagacgccgcggcggctggcgcggcgcgcgtgcgccgcgacgtcgccgggggaggagatgagccgggtgcgcgcgcgctccggcgcgcgcatggcgcggaggctgcggtggcacgacctcgtcgggctcgggctcggcggcatggtgggcgccggggtgttcgtcaccacggggcgcgccacgcgcctctacgccgggcccggcgtcgtcgtgtcgtacgccattgccggcctctgcgcgctcctctccgccttctgctacaccgagttcgccgtcgacatgcccgtcgccggcggcgccttcagctacctccgcgtcaccttcggggagttggcggcgttcttgaccggggcgaacctgatcatggagtatgtcttctccaacgccgccgtggcgaggagcttcacggcgtacctcggcacggcggtgggcgtcgacgcgccgagcaagtggcggattgccgtgccgggcctccccaagggcttcaacgaggttgaccttatcgctgtcggcgtcatcctcctcatctccgtctgcatctgctacagcaccaaggagagctcggtggtgaacatggtgctaacggcggtgcacgtggcgttcatcctgttcatcatagtgatggggttctggcgcggcgacacccggaacctgacgcggcccgtcgacctggcgcacaacccgggcgggttctttcctcacggcgcagccggcgtgttcaacggagccgccatggtgtacctgagctacatcgggtacgacgccgtgtccaccatggccgaggaggtggagcggccgtcacgcgacattcccgtcggcgtctccggctccgtcgtgctcgtcacactcctctactgcctcatggccgcctccatgtccatgctcctcccctacgacgcgatagacacggaggcgccattctcaggggcgttcaaggggagctccggatgggggtgggtgtcgaacgtgatcggcgccggcgccagcctcggcatcctgacgtcactcatggtggcgatgctaggtcaggccaggtacctctgcgtcatcggccgctccggcgtcatgccagcgtggctcgccaaggtgcacccctgcaccgccacccccgtcaacgcctccgccttcctcggtgtgttcacggcggcgctggcgctgttcacggagctcgacgtgctgctcaacctcgtctccatcggcacgctcttcgtcttctacatggtcgccaacgccgtcgtctaccgccgctacgtcgccgccgacgacgacgacgccgaccaccgccgcgcgtggccgacgctcgtgttcctcgccgccttctcgctcgtggcgctctgcttcacgctgctgtggcagttcgcgccggcggggcgcgccaggacggggctcctcgcggcgtgcggcgcggccgccgtggcgacggtcggcgcgttccgggcgctggtggcggaggcgcggcggccggagctgtggggcgtcccggccatgccgtgggtgcccgcggcgtcggtgttcctcaacgtcttcctcctcggctccctcgaccgcccctcctacgtccgcttcggcttcttcaccgccgccgccgtgctcgtctacgtgctctacagcgtgcacgccagctacgacgccgaggagggcggtggcgccggcgccggcgccgccgcgctcgacggcgccaaggtgcaggacgaggctgcagacttcaagttgagaagcccaaatggccactgctcactaactgttaaacattacctcggcaggcagaaattcagatctcacctacgtcttcttcaaaccttttctcatcatttgacttgcactgaagataagattttgggggcaatgcagtggagtggacttcactttcagagctcaaaacaataa</cdnaseq>

Protein Sequence

<aaseq>MDKGALVVQVMDDSSNGGVGAAAAGGSFSSLRAYGRALAQTPRR LARRACAATSPGEEMSRVRARSGARMARRLRWHDLVGLGLGGMVGAGVFVTTGRATRL YAGPGVVVSYAIAGLCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGELAAFLTGANLI MEYVFSNAAVARSFTAYLGTAVGVDAPSKWRIAVPGLPKGFNEVDLIAVGVILLISVC ICYSTKESSVVNMVLTAVHVAFILFIIVMGFWRGDTRNLTRPVDLAHNPGGFFPHGAA GVFNGAAMVYLSYIGYDAVSTMAEEVERPSRDIPVGVSGSVVLVTLLYCLMAASMSML LPYDAIDTEAPFSGAFKGSSGWGWVSNVIGAGASLGILTSLMVAMLGQARYLCVIGRS GVMPAWLAKVHPCTATPVNASAFLGVFTAALALFTELDVLLNLVSIGTLFVFYMVANA VVYRRYVAADDDDADHRRAWPTLVFLAAFSLVALCFTLLWQFAPAGRARTGLLAACGA AAVATVGAFRALVAEARRPELWGVPAMPWVPAASVFLNVFLLGSLDRPSYVRFGFFTA AAVLVYVLYSVHASYDAEEGGGAGAGAAALDGAKVQDEAADFKLRSPNGHCSLTVKHY LGRQKFRSHLRLLQTFSHHLTCTEDKILGAMQWSGLHFQSSKQ</aaseq>

Gene Sequence

<dnaseqindica>1..442#1868..2090#3428..3779#4500..4731#5289..5866#7997..8173#atggacaagggcgcgctggtggtgcaggtgatggacgactcgtcgaacggcggcgtcggcgccgccgccgccggcggctcgttctcgagcctgcgcgcctacggccgcgcgctggcgcagacgccgcggcggctggcgcggcgcgcgtgcgccgcgacgtcgccgggggaggagatgagccgggtgcgcgcgcgctccggcgcgcgcatggcgcggaggctgcggtggcacgacctcgtcgggctcgggctcggcggcatggtgggcgccggggtgttcgtcaccacggggcgcgccacgcgcctctacgccgggcccggcgtcgtcgtgtcgtacgccattgccggcctctgcgcgctcctctccgccttctgctacaccgagttcgccgtcgacatgcccgtcgccggcggcgccttcagctacctccgcgtcaccttcggtgagctgccagccatggccgttatatcagttatagatatcgttgccattgacgccaattttaacggatcctatctctttccatgcatatatactcaaaactaacaatgcaaaatctttttcttttctgttcgtttatcttttggtatcaaaattagtttgttattactgattctgctggttttcaattcgttcgtgcgattattttcatgggcattgtgaaatgacatgccgaaaattttaagagagagagagagagagatttccttttctcaaatatttgatggttatatatctctatctttttttttcttcctcttgtccagttgatcaaagcctcacaagaagcgtaccttttttttttgcgcattttcatgtgcaagtgcgatgtcgtctcatgaacatgacgcttctgagcctgcttcttctgtgttgtcctttcgtatctcacgagtcatttggagtatatttatgataaaaatttgtagtacctgtgttgtcattgattggtacatttttgtgatctagcagttgttgtttgctttttaaaaactaattttgagtttttcaaaaaagtaccatatgctggacactttggctcttcatttacttttaaggttggatttgtttccccttttttcttccaagagaatatctgtttttccttgtctgcttactggttttctttgtgtttgtcaaaagctttctttctttcttttttgccgccagggtaaagaattaaaaaaaaaactcatttccaactgtaaaataaaatgcgtccaaatcgtcaaaaagagagagagagacaccgtaattaaggagggaagcaatcgttcaacagtacaaaactcccttgtgatttaaaagatttacaatatcctaatttacacaagctttgctggttgacactgatttgtcaactgatgctggagtaaaacagtagtagattctactagcatggagaacaacagaagaaaaaaaagagaagtattattgctctctctatctctcgaaaaaagttgagtgtgactttcaactaattttaatgcacacgcacacacatacatacggacatccatatccaaataatgttggtagtccctttcttgcatctcccaaaggccttgctcttttcgtccaaatgcacacaagaccccactcattttcaccatccaccatgcaacaccaagatgaagatcctgacattcctctgtaattttgcatgcaattgatttcctttcacaatgctctgaaaattttctttcctaccatgcttgtaattaattaactgattctctctgaaaactactcatcaaagtagtaacttgatttgtagcatttggcattcttcgatgagttttgatcatgttcttcttttgtgaatctcaagtgtggttcttttttttgttggtgaataataattcaggggagttggcggcgttcttgaccggggcgaacctgatcatggagtatgtcttctccaacgccgccgtggcgaggagcttcacggcgtacctcggcacggcggtgggcgtcgacgcgccgagcaagtggcggattgccgtgccgggcctccccaagggcttcaacgaggttgaccttatcgctgtcggcgtcatcctcctcatctccgtctgcatctgctacaggtaataacacagagagctctatcttttcgcttatgcttatgcttatcagccaaaatttgaatttttaactttaaatttagagttgattttgggatttttttatcaaagtttatttttcagcatttgcttttagatcgttaaaaacatgtatataaaatttatattcataaattatttttttttgcaaatataccgtttggcttattttccgaataagcaaaatgatggagccgcaagttcctctctttctttttcttccaaataaatgtgcatctgttttgttgtttagctttatcgtttgtctttcaacttattagtattagttaaaatttaaattttacaacctaattctaattttagagttggaattagaattttttttcatcgtagttcatattttagccttggcttttaataatttggtattaaagttgttttcatgaattgttattttggtttttatcagctactatatattaaaggttttttgttgcttgtgttgtcctctctgcttcttgtcacgatacttgttttgaccatggtgttcctcttgacagaagactccaaagtacgaattacgaagcaagtaggcttcctattttatctatgtgtaggagtatcaatctatggttcccatgttaatttttttttctcctttctttggactttgttcttgcaagtgtgctgtattcatccaatgatcagcctttggggttttttcttggttactggtgtaggttggttctggtggttgctgcttgtttttcctttctctgcaaccaactgctcttggaacctagttttctttgaaatggctacattccaaaaggttgagagcaagtgggggctaattaaaattcctcaagttctatccattcttgaaaaattttgagatatttgttatgggcagaggaaagaatcttcctgtgtgcatgcccatcactattctaattcagtgtgtgcaatgtatgcaagtctacaaccaccatgccttcttttctcttctctctgacttgtgtaggtaacatgagcaatcctttctccagaaaaggaatctcaaaagtttttattataggggttgcttatcagttacaacaaacagcccatttcccaagcaaacttgaacgataaaatatttaaaaaatggtttctataagcactcgtttttaccatgttttctaacaaaagaaaattagtagctctcagtacctcgttgccaaaatgtgggatttgtttcgtaaactctttcaagtgttttgacagattagttacagtatttgtttcatgcctaatttgaattgtatttttgacaaaatttatatcatatacgttctcagcaccaaggagagctcggtggtgaacatggtgctaacggcggtgcacgtggcgttcatcctgttcatcatagtgatggggttctggcgcggcgacacccggaacctgacgcggcccgtcgacctggcgcacaacccgggcgggttctttcctcacggcgcagccggcgtgttcaacggagccgccatggtgtacctgagctacatcgggtacgacgccgtgtccaccatggccgaggaggtggagcggccgtcacgcgacattcccgtcggcgtctccggctccgtcgtgctcgtcacactcctctactgcctcatggccgcctccatgtccatgctcctcccctacgacgcggtaagtaattttcttttctactttatgcaatatactaataatcttaagagtaattaattagctctactgttgttttgcatttatttgcatgattacacgtaaggcatacacatattattgtacacgtgcatccacatgcacacacccgtgaatatgttcctttgacaaaggctcgaaaatacgaagaccaacggtaaatccgtgtacaatcgatatatgcataagcttttgagagaaaccaaatcctgaaatgttccaggattccgtctacggcaaagtcgggattcctggataggcatgtagaggtagctcgtggtgttgtctgaacttttacttgggataattctgggaatatgttggggagctatggtgaagtggcgcagtagagaccatgcagctcagcttctgttttattttttctcactgcctttttgggatgtttgtcctgcctgcctgcgacttcattcgtggtgaatctgctgtccccatcagaagacaccccacagtgagaggccactgtactttcctagctagtatagatgaccgatcactgaagcatctcaaaattcaccttttctatgccccctacttcttttttatcctctcctgtgtggaccatagaaataactgacactattacggtgctaataaccgtgcagtaataattttcggattaagcaatttgttaatcataagtatgtttttgttttggtggtgcagatagacacggaggcgccattctcaggggcgttcaaggggagctccggatgggggtgggtgtcgaacgtgatcggcgccggcgccagcctcggcatcctgacgtcactcatggtggcgatgctaggtcaggccaggtacctctgcgtcatcggccgctccggcgtcatgccagcgtggctcgccaaggtgcacccctgcaccgccacccccgtcaacgcctccgccttcctcggtgagctcatctctctaccaccacaaaacacatttcaccataataatcgcacggcactagtcaactaaaaggaagaggatcagaaaaaaaaagtaaaaatatggataggaattgggagttctaccaaacgagagcgatgagccgttgcaactatatatgctactgctacacatagtggttgctttttgtggactttttttttcgtgaccttgcaactgtttttactcatgggaggcttgcttgataattgaaaaggcagcagacatggacacgggttttttggggctccaaatatcgatcaacaggagaaacaaatactacagaaactggttaatttgtacttagtgcgctgcttgggtctattctggctcaatcgaaaccgacgatgagaacgcctacttctcctcgtggatgtctactaggattcaacgccaaaatgatccaaaatagttgaatcattttccttttcttctatttttttctaaaaaataaaacagtggtttcccgcgctttttgggggtgttttcgtaatattggcggtttggtgtgttcgtcaggtgtgttcacggcggcgctggcgctgttcacggagctcgacgtgctgctcaacctcgtctccatcggcacgctcttcgtcttctacatggtcgccaacgccgtcgtctaccgccgctacgtcgccgccgacgacgacgacgccgaccaccgccgcgcgtggccgacgctcgtgttcctcgccgccttctcgctcgtggcgctctgcttcacgctgctgtggcagttcgcgccggcggggcgcgccaggacggggctcctcgcggcgtgcggcgcggccgccgtggcgacggtcggcgcgttccgggcgctggtggcggaggcgcggcggccggagctgtggggcgtcccggccatgccgtgggtgcccgcggcgtcggtgttcctcaacgtcttcctcctcggctccctcgaccgcccctcctacgtccgcttcggcttcttcaccgccgccgccgtgctcgtctacgtgctctacagcgtgcacgccagctacgacgccgaggagggcggtggcgccggcgccggcgccgccgcgctcgacggcgccaaggtgcaggacgaggctgcagacttcaaggtgtagcagggtgtgtggttgaccgttgacttatgcacagctcaatctcgacctacctttttctttttcttttttgtttgttgaatttttttttttgtgttgcctcaatcattaggagattaggggtatgatgactatcacgttaattagtagagaagaatctaacatggttacatggggaagaaaaacacgagagaaaaaacaagggaaactttacttgtaagtgcaagatgaaatgtacatgcattttgccaatttttctctgccaaaattaattactggatagtattgtttttctcttattttttatatatgatctgtttatataggtacaatttcatcttctgttcttgtactcttgttaaattcattagtttctcggaaagcaccagtggtatggtgtggtggtggaatcgtagatacatgactaaaaaacaagttaattaatactagagcacatgacatcgctatcttccgatcctaagtcgatatttccatttctatcatgtaagaaatctcttgggctttcttttatataaagttggatcgaataatcttttcatcgagaaaactgtaaaacaccgaagaaaaatttcacggccgcgccggtgaagggaatcttgacctggaatttcactgaacaatgtcaatgtccagattcccctcaaacagcccaacacctaatccgaatcttaatgctgttatgcagaggagacgacagagacctccatttccaagagaccttttggcaatgcaatgtctctctcctctgacttgtgaaatggttgttgccgtgtgacattttttctgctgctaatttgcatcggaaagtgcagaagaaaaatggatgaatgaatcatatctgaatcatggtctttttctccttatgcttatctcgtaaagatggcacgattagtagaactgtaggagatgtggtgaactggtgatctgaaagcttctgatgcatgcatggatccactagcttttctctgtaaaatggatgaacactgaaatatatatatatgctcgtggaaaaatttggtggattgcaacgagcatatgaaatcactcacgcatgcttgctgctcgcgtctctgtctgaaaatggcgcacattgcgcgtgcagaaatgtgcaacgacggcatgaaattgtgagtggtcaggaagagagaagagaagcgaatgatcaccaatttcatcctcctttctcctgaaaagagaagagtgatggatggattcagacaaaaatcgaagttctttttcttcttcagacttttttcagaatgttgcaaactaatgacaattattcagtgatatgattgacactgtgttcaatgtgcaccaacagttgctagatcctgtcgtggcggaaacactgtgttcgatcctgtttctgagaaatgatgagaatcaaatccagcgtccactgacactgaggagaaggcggctgaagaaatcttctttctttcatccgaattccaatcgcattaatcaaatcctcccttcacctaattaaatctctgaaagtgcagcgtgacaactacggcgcacaaagctctctgctccattttgctgaaattttttttggctcgttttattccatttgccgacactccgtttcgaggtgaatctactgtataggctttggaaaattggtgattggtgagtgtaggttccatttctagcaagcgacctcatggtaatcacctttttctattttctacatttcttttttgtgagtgcatatctgatctcagtgtgctagaatgctttgcaccttaagaaaaggtggcaggtgtcggatacgcaaactcctgatcaaaatgcagtttgcatttttatgactcctttggagcacaagaattttactggatttcggcaaaattactttgtaattaatgagtttgtactagctaattttacatgaagaagggcactagctaaagtttacagagcaattcaaaggtttacaagagcactagctaactgctgaaactacttttttttgctacatcgtgaacaccttttaacttgatgatcattatgttgtcatgatactgtaatactttgtaccagtaacctttaccagctcatgtcagttgacaacatctgatctctccttttctgcagttgagaagcccaaatggccactgctcactaactgttaaacattacctcggcaggcagaaattcagatctcacctacgtcttcttcaaaccttttctcatcatttgacttgcactgaagataagattttgggggcaatgcagtggagtggacttcactttcagagctcaaaacaataa</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0155500, RefSeq:Os11g0155500