BGIOSGA028273

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Revision as of 07:56, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028273| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028273, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA028273

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028273, complete gene.

LocusTag

OSJNBB0070J06.25

Ensembl Transcript ID

BGIOSGA028273-TA

Ensembl Protein ID

BGIOSGA028273-PA

Length

4620

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:9461555..9466174

Sequence Coding Region

9461555..9461914,9462670..9462729,9462850..9462926,9463157..9463298,9463412..9463448
,9463528..9463597,9463697..9463888,9463997..9464089,9464221..9464449
,9464537..9464620,9464717..9464868,9464955..9465051,9465252..9465401
,9465489..9465566,9465658..9465780,9465878..9465991,9466094..9466174

Genome Context

<gbrowseImage1> name=IndicaChromosome08:9461555..9466174 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:9461555..9466174 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTGGTGGCGGCGCTGCTGCGGGGGCTGACGCCGCGGGCGGAGCAGCTGCTGCAGCTGTCGTCCGGGGGAGGGGAGGCCGCCGCCGGTGGCGCGGCGGAGGCGAGGGCCGCGGTGGCCACGGTGNCCGCCGCGCTGCTCGGGTGCGCGTTCTTGGTGTTATGGAGCCGGTTCTCGCCGGGTCGGAATCGGAAGAGGGAGGAGTCGGAGAGGTCGTCGTCGTCCGTGTCTGGGGTGGGGAAGGGCGGGAAGAATGCCTCCGCGGCGGCCGGGGAGGAGGCCGGCGGCGCCGACGGGAGGAAGCGGGTCACCGTCTTCTTCGGCACGCAGACCGGCACCGCCGAGGGCTTCGCCAAGGCACTCGCTGAGGAGGCTAAGTCAAGATACGACAAGGCGATATTCAAAGTTGTGGACTTGGATGAGTATGCGATGGAGGATGAGGAGTACGAGGAGAGATTGAAGAAGGAGAAGATATCGTTGTTCTTCGTTGCAACGTACGGAGATGGTGAACCGACTGACAATGCTGCTAGGTTCTATAAATGGTTCACTGAGGGAAATGAGAGGGGTGGTTGGTTGAATGACTTCCAGTATGCTATTTTTGGTCTTGGCAATCGGCAGTATGAGCATTTCAACAAGGTTGCCAAGGTTGTTGATGAGCTCCTAGTTGAGCAAGGTGGAAAACGTCTTGTTCCGGTTGGTCTTGGAGATGATGATCAATGCATTGAGGATGACTTCAACGCATGGAAAGAAACTCTCTGGCCAGAATTGGATCAGTTACTTCGGGATGAAAATGATGTTTCAACAGGCACTACCTACACAGCTGCCATTCCTGAATACCGGGTTGAATTTGTTAAGCCTGATGAGGCAGCCCATTTGGAGAGAAATTTCAGTCTTGCAAACGGTTATGCGGTTCATGATGCTCAGCATCCTTGCCGGGCCAACGTGGCTGTGCGAAGGGAACTCCACACTCCTGCTTCTGATCGTTCATGCACTCACTTGGAGTTTGACATTGCTGGCACTGGTCTTACGTATGAAACCGGTGACCATGTTGGTGTATACACAGAGAACTGCCTCGAGGTTGTAGAGGAGGCAGAGAGGTTGTTAGGCTACTCCCCAGAGACTTTTTTCACCATCCATGCAGACAAAGAGGACGGTACACCACTAGGTGGTGGTTCTCTGGCTCCTCCATTCCCTTCCCCGATTACTGTGAGGAATGCGCTTGCTAGATATGCGGATCTTCTGAATTCACCGAAGAAGAGTGCTTTGGTTGCATTAGCTACTTATGCTTCAGATTCTACTGAAGCTGATCGTCTGAGGTTCTTGGCCTCTCCTGCTGGAAAGGATGAGTATGCTCAATGGGTTGTTGCGAGTCAAAGAAGTCTATTAGAAGTGATGGCAGAGTTCCCTTCAGCAAAGCCTCCACTAGGAGTCTTCTTTGCAGCCGTTGCTCCTCGTCTTCAGCCGAGATACTACTCAATTTCATCTTCACCTAGCATGGCACCTACCAGAATTCATGTTACATGTGCACTTGTCCATGAAAAAACACCTGCTGGAAGGGTACATAAGGGAGTCTGCTCAACATGGATTAAGAATGCTATTCCATCAGAAGAGACAAAGGACTGCAGCTGGGCTCCAGTTTTTGTGAGACAATCAAACTTCAAACTGCCTGCTGATCCTTCAGTACCGGTTATCATGATTGGCCCAGGAACTGGTCTTGCTCCTTTCCGCGGATTCTTGCAGGAGAGGCTGTCTCAAAAACAATCAGGAGCTGAGCTTGGTCGCTCCGTATTCTTCTTTGGATGCAGAAACAGCAAGATGGACTTCATCTATGAGGATGAGCTGAACACTTTCCTTGAGGAAGGAGCATTGTCCGAGCTGGTTCTCGCCTTCTCTCGTGAGGGCCCTACGAAGGAATACGTGCAGCACAAAATGTCGCAGAAAGCTTCCGAAATCTGGGACATGATCTCCCAGGGTGGTTACATTTACGTCTGTGGTGATGCCAAAGGCATGGCCAGAGATGTACATAGAGTTCTCCACACCATTGTACAGGAACAGGGATCACTTGACAGCTCTAAGGCTGAGAGCTTTGTGAAGAGCCTCCAAACGGAGGGTAGGTATCTGAGAGATGTGTGGTAA</cdnaseq>

Protein Sequence

<aaseq>MELVAALLRGLTPRAEQLLQLSSGGGEAAAGGAAEARAAVATVXAALLGCAFLVLWSRFSPGRNRKREESERSSSSVSGVGKGGKNASAAAGEEAGGADGRKRVTVFFGTQTGTAEGFAKALAEEAKSRYDKAIFKVVDLDEYAMEDEEYEERLKKEKISLFFVATYGDGEPTDNAARFYKWFTEGNERGGWLNDFQYAIFGLGNRQYEHFNKVAKVVDELLVEQGGKRLVPVGLGDDDQCIEDDFNAWKETLWPELDQLLRDENDVSTGTTYTAAIPEYRVEFVKPDEAAHLERNFSLANGYAVHDAQHPCRANVAVRRELHTPASDRSCTHLEFDIAGTGLTYETGDHVGVYTENCLEVVEEAERLLGYSPETFFTIHADKEDGTPLGGGSLAPPFPSPITVRNALARYADLLNSPKKSALVALATYASDSTEADRLRFLASPAGKDEYAQWVVASQRSLLEVMAEFPSAKPPLGVFFAAVAPRLQPRYYSISSSPSMAPTRIHVTCALVHEKTPAGRVHKGVCSTWIKNAIPSEETKDCSWAPVFVRQSNFKLPADPSVPVIMIGPGTGLAPFRGFLQERLSQKQSGAELGRSVFFFGCRNSKMDFIYEDELNTFLEEGALSELVLAFSREGPTKEYVQHKMSQKASEIWDMISQGGYIYVCGDAKGMARDVHRVLHTIVQEQGSLDSSKAESFVKSLQTEGRYLRDVW</aaseq>

Gene Sequence

<dnaseqindica>1..360#1116..1175#1296..1372#1603..1744#1858..1894#1974..2043#2143..2334#2443..2535#2667..2895#2983..3066#3163..3314#3401..3497#3698..3847#3935..4012#4104..4226#4324..4437#4540..4620#ATGGAGCTGGTGGCGGCGCTGCTGCGGGGGCTGACGCCGCGGGCGGAGCAGCTGCTGCAGCTGTCGTCCGGGGGAGGGGAGGCCGCCGCCGGTGGCGCGGCGGAGGCGAGGGCCGCGGTGGCCACGGTGNCCGCCGCGCTGCTCGGGTGCGCGTTCTTGGTGTTATGGAGCCGGTTCTCGCCGGGTCGGAATCGGAAGAGGGAGGAGTCGGAGAGGTCGTCGTCGTCCGTGTCTGGGGTGGGGAAGGGCGGGAAGAATGCCTCCGCGGCGGCCGGGGAGGAGGCCGGCGGCGCCGACGGGAGGAAGCGGGTCACCGTCTTCTTCGGCACGCAGACCGGCACCGCCGAGGGCTTCGCCAAGGTATCCATCCATCGATTGCTTCCCCATCATGATGATGATGAATTGACGGTGAATTGTTTCGAATTGTTCGCGTTCGAAATAATTCCAACAATATTGGGATGATTCTAATTTCTAAGTAAATACTCCTTTCAAAATAAAAAAATAAAAAAAACGAATTCTATTGTAAGGGACGCGTAGTTGTTGCTGATTTGATCGATGGAGACTTTTGAAGATCTTTCAATCGTTTTCCTACACGGGGACCACCTTCGCGGGAGTAATATTTCTCGAGTCCATGAAAAATTGCTCTGATGATATTTCTCCAGTTTGTGGTGAATCCATGGAAGAAGGACAGATTTTATCACATTTTCTGGTGTGGTTTATGCCACGTCTAATCACTTATTTAGCGCCAGAAAAAAAATGTGTGTACAAAAGAGAGAAAGTACAACCTCATGGGCTAGCGTCAAGGACATGTGGGAATTGAGATGGCGATTTTTTTTTAGTTGTTGACCAAAACTAAGCACTAGAAGCGTCCTGGTCTGGTAGGGAGGACGATAGGTTATCAAAGTGTCAACTGTCAAGGAGGTTGGTGGCCTAAAACGCCTTCGGCTCCACCACTCATTTACCATTTTCTTCTTTGATTGCAATCGTGTCTCACCAGAAACTCATGGCGTGTGAATAAGGAAGACAAGGAAAAAAAAATGAAAAGCAATTGCCTTTTTTGTATTTTGGTACCCTGTTGTAGCTAATAATGTTCTTATTGTTCTCCTGACTTACAGGCACTCGCTGAGGAGGCTAAGTCAAGATACGACAAGGCGATATTCAAAGTTGTGGACTTGGTAAGATACAGCTGACAATTCAGAAAAAAAAAAGTCAAACAAGAACTGCTGTCCAGTATTATTGAGTAGATAGAAGTGTCATCTCAGATGATCTTATGCACAATGTGATGATTGTTATAGGATGAGTATGCGATGGAGGATGAGGAGTACGAGGAGAGATTGAAGAAGGAGAAGATATCGTTGTTCTTCGTTGCAACGTAAGACACTTGTTCTTTGGATCTTATCTTTCATACACTTTCTTTGAATATTATATATACTTCACAGATATTATACATAATCAACTTATGCTAATGGTTGCCCTTCCCTAAGTGATAGAAAGTACAAAGACTTTCAGTCAAAAGAAATACAAGGAACATCAATCTTCTTCTATTTATGTTGGTATACTGTGTTAGGAAACCTTTGTAATATTTTTTGGTTGACATTTCAGGTACGGAGATGGTGAACCGACTGACAATGCTGCTAGGTTCTATAAATGGTTCACTGAGGGAAATGAGAGGGGTGGTTGGTTGAATGACTTCCAGTATGCTATTTTTGGTCTTGGCAATCGGCAGTATGAGCATTTCAACAAGGTACCACACTTATCATCTGTTTGAATTTCCTAACCCTTGTTGCCAGTCTGTAAAAACCTTGTCATGTTCTTATATATTAATTAGATTGCTTTGTTTTTTGCTTCTGATGACAGGTTGCCAAGGTTGTTGATGAGCTCCTAGTTGAGCAAGGTGTGCCTCATGACTGCCCTGCCCTACAGACTTTTGATATATCTGTTCAGTTTATCTCAAGCATTTTGTGTTTGTTTAGGTGGAAAACGTCTTGTTCCGGTTGGTCTTGGAGATGATGATCAATGCATTGAGGATGACTTCAACGCATGGTACGCATTATCTTGCTCTTTCAAGCTTATTTTAGTTATTTTAGGCATTTCCGCACTTGTGTTACTTACATTCCTTTCTGAACTTTTACATATCACCAGGAAAGAAACTCTCTGGCCAGAATTGGATCAGTTACTTCGGGATGAAAATGATGTTTCAACAGGCACTACCTACACAGCTGCCATTCCTGAATACCGGGTTGAATTTGTTAAGCCTGATGAGGCAGCCCATTTGGAGAGAAATTTCAGTCTTGCAAACGGTTATGCGGTTCATGATGCTCAGCATCCTTGCCGGTAAGTATGCGGCTATAAAGTCCATTTGTTTTCTTAATAGTATGGTTGTCTGTATTTGTAATGGTGGAATCGAAGCTAACAATCTGCAAATTTCTTTTGAATCTGTAGGGCCAACGTGGCTGTGCGAAGGGAACTCCACACTCCTGCTTCTGATCGTTCATGCACTCACTTGGAGTTTGACATTGCTGGCACTGGTCTTACGTAAGTCATCTGATTCCATTCATTATCCTTGACAAATATCAGGCCTTGGCAACAAAATTAAGTACATCAAAATTCCAGTCCATATCCTTTTCTTCATTTATTCTAACATGTTTCTCCATGCTTCTTATCAGGTATGAAACCGGTGACCATGTTGGTGTATACACAGAGAACTGCCTCGAGGTTGTAGAGGAGGCAGAGAGGTTGTTAGGCTACTCCCCAGAGACTTTTTTCACCATCCATGCAGACAAAGAGGACGGTACACCACTAGGTGGTGGTTCTCTGGCTCCTCCATTCCCTTCCCCGATTACTGTGAGGAATGCGCTTGCTAGATATGCGGATCTTCTGAATTCACCGAAGAAGGTGAGCATTTCAGTAGTTCAATATACTACGAGTTCCACAACTGTTGACTATTGTTTCTCTGATTTCTAATGTGTGTATGTTTTGCAGAGTGCTTTGGTTGCATTAGCTACTTATGCTTCAGATTCTACTGAAGCTGATCGTCTGAGGTTCTTGGCCTCTCCTGCTGGAAAGGTCAGTTCTTTTTTCTTTCAGATATCTGCTCACGCTTTCATCATCCTATGGAATACAATAATCGAAAATCTTAATATCATGCTTTTCATGATTCAGGATGAGTATGCTCAATGGGTTGTTGCGAGTCAAAGAAGTCTATTAGAAGTGATGGCAGAGTTCCCTTCAGCAAAGCCTCCACTAGGAGTCTTCTTTGCAGCCGTTGCTCCTCGTCTTCAGCCGAGATACTACTCAATTTCATCTTCACCTAGGTAAAATATCCTACTTATGCTTTTTCTTCCTCATTTTAAAATTGTTCCTTACCTTTTTATTGACATGCATTTCCTTCTTCCATCAGCATGGCACCTACCAGAATTCATGTTACATGTGCACTTGTCCATGAAAAAACACCTGCTGGAAGGGTACATAAGGGAGTCTGCTCAACATGGATTAAGGTAACTAATCAACGTCATATCAACCCCTATTGAGTATTCTAGGTCGGATTATTTACCTATATATCATCTGAAGTTCTAAGTATCCTGCAAAGTACAGAACCCTTGCTGCAACGTTGAATTGAAACACCTGAGTTGACAGTAAATCCCTCAGACCATAAACATGTCTTCTGATATTTCTCTATCACTATTCAATTTCGCAGAATGCTATTCCATCAGAAGAGACAAAGGACTGCAGCTGGGCTCCAGTTTTTGTGAGACAATCAAACTTCAAACTGCCTGCTGATCCTTCAGTACCGGTTATCATGATTGGCCCAGGAACTGGTCTTGCTCCTTTCCGCGGATTCTTGCAGGTTTCTTGCTGTTCAATGATAATTTTACATCACTACTGATATTTATTATGAGAAGTAACTAATATATAAATGCATTCATGATATCAGGAGAGGCTGTCTCAAAAACAATCAGGAGCTGAGCTTGGTCGCTCCGTATTCTTCTTTGGATGCAGAAACAGCAAGATGGTACGCACCAAATAGACACACTGCATAACATGAATATCCTTAAAACACTAGAGGGTTCTTTAATGTAGCTGACATATTATAAACTTTGCAGGACTTCATCTATGAGGATGAGCTGAACACTTTCCTTGAGGAAGGAGCATTGTCCGAGCTGGTTCTCGCCTTCTCTCGTGAGGGCCCTACGAAGGAATACGTGCAGCACAAAATGTCGCAGAAAGTAATTGAGCTACTTGACATTTTCATACATGTTTGTTGATCTGCAAATTCATGTTTTTGTTCAGCGTTGCTCATATTTCCTACCTTTGTCTGTCCAGGCTTCCGAAATCTGGGACATGATCTCCCAGGGTGGTTACATTTACGTCTGTGGTGATGCCAAAGGCATGGCCAGAGATGTACATAGAGTTCTCCACACCATTGTACAGGAACAGGTATTTTTCTCACAGCCATTACACACTTGCTGATAAAATTTGTTTCATTCTGTCCGTCAGTATATTTCCGGCATAAATTGATGACGGTTTTTTGCGTTACAGGGATCACTTGACAGCTCTAAGGCTGAGAGCTTTGTGAAGAGCCTCCAAACGGAGGGTAGGTATCTGAGAGATGTGTGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028273