BGIOSGA028311

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Revision as of 07:56, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028311| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028311, complete gene.| tag = OJ1112_...")
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Gene Name

BGIOSGA028311

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028311, complete gene.

LocusTag

OJ1112_D12.6

Ensembl Transcript ID

BGIOSGA028311-TA

Ensembl Protein ID

BGIOSGA028311-PA

Length

2688

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:10435368..10438055

Sequence Coding Region

10435368..10435709,10436356..10437242,10437575..10438055

Genome Context

<gbrowseImage1> name=IndicaChromosome08:10435368..10438055 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:10435368..10438055 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGCGGCGGCGGCGGCGTGAGGCTGAAGGCCGGGACGCGGCCGCCGTGGGTGGGGCTAGCGGCGGCGGTGTGGGTGCAGATGGCGGCGGGGAACGCGTACACGTTCCCGCTCTACTCGCCGGCGATCAAGGCGGCGCTGGGGTACACGCAGCAGCAGCTCGCCGTGCTGGGCGTCGCCAAGGACGTCGGCGAGAACTTCGGCGTCGTCGCCGGCGTGCTCTGCAACAGCTTCCCGCCCTGGGTGGTGCTGCTCGTCGGCGCGGCCTTCTGCTTCGTCGGCTACGGCGCGCTCTGGCTCGCCGTCAGTGGCGCCGTCGTCGCCATGCCGTACTGGTTGCTATGGATTGTGCTAGCAATGGCAACAAACAGCAACGCGTGGTTCCTGACAGCCGTGCTGGTGACCAACATGCGCAACTTCCCGCTCCGCCGCGGCGTCGTTGCCGGCCTCCTCAAGGGCTACATCGGCGTCAGCGCCGCCCTCTTCACCCAGGTCTTCTCCGGCGTGCTCCACCGCTCGCCGACGAGCCTCCTCCTCCTCCTCGCCACCGGCCTCCCCACCATATGCCTCGCCACCATGTACTTCGTCAGGCCCTGCACGCCGGCGACGCTCGACGCCGCCACAACCGACGCCGACACCGAGGAAGACGGCCATTTCGCCTTCACCCAAGCCGTGAGCGTCGTCCTCGCCGTCTACCTCGTGACAACCACCGTCCTCGGCAACGCCATCAAACTCTCCGATGCAACCAGCTACACGCTTTTCATCGTCACCGTGCTTCTGCTTCTTGCGCCGCTCGCGATCCCGGTGAAGATGACATTGTTCAGGAGTTCGCCGCGGCGGCGGAGTACAGAAACAACGGAGGAGCCATTGCTGATCCCGCCACATGTGGTCGTCGACAGCGGCGGCGATGGCGACGAGGAGGAATCTGACAAGGTGGATTTGCTGCTAGCGGAAGGGAAGGGGGCGGTGGTGAGGAGGACGAAGAGGCGGCGGCCGAGGAGAGGGGAGGACTTCGAGTTCAGTGAGGCGCTTGTCAAGGCTGATTTCTGGCTGCTGTTCGTTGGATACTTCATTGGAGTTGGAACGGGTGTCACCGTGCTGAACAATCTGGCACAGATTGGTGTTGCTGCTGGTATTGGTGACACTACGGTTTTGTTGTCCCTGTTTGCGCTTGGTAACTTCTTTGGCCGCCTCGGTGGAGGTGCAATTTCAGAGAAATTTGTCAGGTCGACATTGTTGGTTCCTAGGCCAATATGGATGGCGTTGACGCAAACCGTCCTCGTCGTCGCTTACCTCTGTCTGGCCTATACTCTCGGCCCAGCCGTCGCCTACGCTTGCACGGCCGCCGTTGGCCTCTGCTACGGCGTGCAATTCTCAGTGATGATTCCAACGACCTCAGAGCTGTTCGGGCTCAAGAATTTCGGTCTCTTCTACAACCTCATGTCCCTAGCGAACCCGCTCGGCGCGGCGCTCTTCTCCGGTGAGCTCGCCGGTCGGCTATACGACGAGGAGGCCGCGAGGCAACAACATTCTGGTGGTGCGTGCCTTGGCCCGGGATGCTTCAGGGCTGCGTTCATGGTGCTCGCTGGTGCCTGCTCAATGGGGACGGCGGTGAGCTTGGTGTTGGCGGCGAGGATACGACCGGTTTATAGGGCTCTTTACTCTGGCGGGTCGTTTAGGTTGCCTAATGCGTCACAGCAGCATTGA</cdnaseq>

Protein Sequence

<aaseq>MASGGGGVRLKAGTRPPWVGLAAAVWVQMAAGNAYTFPLYSPAIKAALGYTQQQLAVLGVAKDVGENFGVVAGVLCNSFPPWVVLLVGAAFCFVGYGALWLAVSGAVVAMPYWLLWIVLAMATNSNAWFLTAVLVTNMRNFPLRRGVVAGLLKGYIGVSAALFTQVFSGVLHRSPTSLLLLLATGLPTICLATMYFVRPCTPATLDAATTDADTEEDGHFAFTQAVSVVLAVYLVTTTVLGNAIKLSDATSYTLFIVTVLLLLAPLAIPVKMTLFRSSPRRRSTETTEEPLLIPPHVVVDSGGDGDEEESDKVDLLLAEGKGAVVRRTKRRRPRRGEDFEFSEALVKADFWLLFVGYFIGVGTGVTVLNNLAQIGVAAGIGDTTVLLSLFALGNFFGRLGGGAISEKFVRSTLLVPRPIWMALTQTVLVVAYLCLAYTLGPAVAYACTAAVGLCYGVQFSVMIPTTSELFGLKNFGLFYNLMSLANPLGAALFSGELAGRLYDEEAARQQHSGGACLGPGCFRAAFMVLAGACSMGTAVSLVLAARIRPVYRALYSGGSFRLPNASQQH</aaseq>

Gene Sequence

<dnaseqindica>1..342#989..1875#2208..2688#ATGGCGAGCGGCGGCGGCGGCGTGAGGCTGAAGGCCGGGACGCGGCCGCCGTGGGTGGGGCTAGCGGCGGCGGTGTGGGTGCAGATGGCGGCGGGGAACGCGTACACGTTCCCGCTCTACTCGCCGGCGATCAAGGCGGCGCTGGGGTACACGCAGCAGCAGCTCGCCGTGCTGGGCGTCGCCAAGGACGTCGGCGAGAACTTCGGCGTCGTCGCCGGCGTGCTCTGCAACAGCTTCCCGCCCTGGGTGGTGCTGCTCGTCGGCGCGGCCTTCTGCTTCGTCGGCTACGGCGCGCTCTGGCTCGCCGTCAGTGGCGCCGTCGTCGCCATGCCGTACTGGTTGGTAAGCACTCATCTGATTCCAACCAGAATTCAATCTTTGGTATTTTCAAAACTTGTATTGGGATGCTGATATGGCGATATTTTCAAAACTTTGGTCCAAAATTTTAAACAAAATTTAGTAACAAATATTACCAAAATTCATGAAAAATTAAAAATTTTGGCCGAAATAATATCATATCGAGGATGGTGATATGACCGAAATTTCAGACCCTGATTCCAACTCCATCAGGTTAAACTACATGAAATAGTTTCTTTAAATGATTTTTCGAGAAATATTAATTTCACTCTTATTTTCTATAGCAAGTTTATAAAAATAAGACTATATAAGTACAACCGAAACTATTTTAGCAAATCTAGCCATACCATTTTTAACTATTAAAAATAATTCTCCATTTTATATTATAAGATGTTTTATTTTTTTAAAAAAAATTATTTGAGTATGATTAAATTTATAAAGAAATGTAGGAAACAAATATACTATCAAACTATAGTCAATATATTAGATTTAATGAAACTAATTTAATTTAATGATATAAAGAGTAAATCATCAATTTTTCTATGATCAAATCTTTTACCTTAACAAAATCTCAATTAAGTGCAACAAAGGTTGTATTAATTCCGATGCTATTGATGACATCACATAACAGCTATGGATTGTGCTAGCAATGGCAACAAACAGCAACGCGTGGTTCCTGACAGCCGTGCTGGTGACCAACATGCGCAACTTCCCGCTCCGCCGCGGCGTCGTTGCCGGCCTCCTCAAGGGCTACATCGGCGTCAGCGCCGCCCTCTTCACCCAGGTCTTCTCCGGCGTGCTCCACCGCTCGCCGACGAGCCTCCTCCTCCTCCTCGCCACCGGCCTCCCCACCATATGCCTCGCCACCATGTACTTCGTCAGGCCCTGCACGCCGGCGACGCTCGACGCCGCCACAACCGACGCCGACACCGAGGAAGACGGCCATTTCGCCTTCACCCAAGCCGTGAGCGTCGTCCTCGCCGTCTACCTCGTGACAACCACCGTCCTCGGCAACGCCATCAAACTCTCCGATGCAACCAGCTACACGCTTTTCATCGTCACCGTGCTTCTGCTTCTTGCGCCGCTCGCGATCCCGGTGAAGATGACATTGTTCAGGAGTTCGCCGCGGCGGCGGAGTACAGAAACAACGGAGGAGCCATTGCTGATCCCGCCACATGTGGTCGTCGACAGCGGCGGCGATGGCGACGAGGAGGAATCTGACAAGGTGGATTTGCTGCTAGCGGAAGGGAAGGGGGCGGTGGTGAGGAGGACGAAGAGGCGGCGGCCGAGGAGAGGGGAGGACTTCGAGTTCAGTGAGGCGCTTGTCAAGGCTGATTTCTGGCTGCTGTTCGTTGGATACTTCATTGGAGTTGGAACGGGTGTCACCGTGCTGAACAATCTGGCACAGATTGGTGTTGCTGCTGGTATTGGTGACACTACGGTTTTGTTGTCCCTGTTTGCGCTTGGTAACTTCTTTGGCCGCCTCGGTGGAGGTGCAATTTCAGAGAAATTTGTCAGGTATGTGTGTTATATGGAAAAAAATAGCTAATTTTTAGAAAATTTTGTTGAAAAGAGACCGAAATTTTTATAGAGTTATTGGCCCATGCATTGTAACGGTTTTTTTATTCGGTTTAGTAAAAAGGATTTGGACAGAGTGGGTTGATTGGTCTTCTATACTATGGTTGGGTTTTTTAGAAATCGGTTTTATAAGATGGAAGTATTTTTAAAGGATGAAGTGCAGGAGAGGAATGGAAGGTCTATTATTTTAAAAGTAGTTGAGGAAATCAAAACAGCCCAAATATTTATTACCAATTCTTTTTTGAAAAAGTGTTATTTTGTTTTGTGGTTAGGTCGACATTGTTGGTTCCTAGGCCAATATGGATGGCGTTGACGCAAACCGTCCTCGTCGTCGCTTACCTCTGTCTGGCCTATACTCTCGGCCCAGCCGTCGCCTACGCTTGCACGGCCGCCGTTGGCCTCTGCTACGGCGTGCAATTCTCAGTGATGATTCCAACGACCTCAGAGCTGTTCGGGCTCAAGAATTTCGGTCTCTTCTACAACCTCATGTCCCTAGCGAACCCGCTCGGCGCGGCGCTCTTCTCCGGTGAGCTCGCCGGTCGGCTATACGACGAGGAGGCCGCGAGGCAACAACATTCTGGTGGTGCGTGCCTTGGCCCGGGATGCTTCAGGGCTGCGTTCATGGTGCTCGCTGGTGCCTGCTCAATGGGGACGGCGGTGAGCTTGGTGTTGGCGGCGAGGATACGACCGGTTTATAGGGCTCTTTACTCTGGCGGGTCGTTTAGGTTGCCTAATGCGTCACAGCAGCATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028311