BGIOSGA028318

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Revision as of 07:56, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028318| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028318, complete gene.| tag = B1015H1...")
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Gene Name

BGIOSGA028318

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028318, complete gene.

LocusTag

B1015H11.141

Ensembl Transcript ID

BGIOSGA028318-TA

Ensembl Protein ID

BGIOSGA028318-PA

Length

2999

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:10873495..10876493

Sequence Coding Region

10873495..10873827,10874479..10874634,10875442..10875537,10875896..10876016,10876324..10876493

Genome Context

<gbrowseImage1> name=IndicaChromosome08:10873495..10876493 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:10873495..10876493 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGGCGTCGCGGCTGCTGCCGCCCACGCCACCTCCCCACTCCGCCGCATCCCCTCCTGCCCGCCACCGCCACCCCGCCCTCGCCGCCCCGCGCTCCCGCCGCCCGATCAACCCGCCGCGCCTCCGGTGCCGCGCCGCCGCGGGGGCCGCAGCCACCACCACCACCACCACCGGCGGAGGCGGGGGTGGCGGCGCGCTGGTGCTGGAGGGGAGCGGCGCGGGCGCGGTGGCTGTGCGGGAGTTCGTGACGCTCGACGAGCTCCGCGCTGCCGTGCGACTCCGCATCCGCACTTTCTACGAGTACGCCACCGACTCCTACGGGGCCGAGGATCTCAGAAAATCTCTGGCGGACCGGGAGTATGACGCATTACAGGATCGAATTTCTGGGAAGATGATCAATTTTCAAAGAGTTTCATGTATAAATGGAACAGTCCCACTGTTGCCTTCTTTGGTGTCAGCAGAGGAGCTTTGTTCTACATGTAAGTTTGTTGAAGATGGAGAAGAGAGAGTTGTAGTTGGTAGTTTAGACCTTAATCAGTGTCTTTGGCTACCAGATGAACTGACCGGAAAGAGGCCTGGGGTAAATGAGTCCAGCCATACAAGGGCTTATCTGAGCAATGTTTGTGTTGCTAAGGAGCTTCAAAGAAATGGATTGGGTTATGCCCTGGTTGACAAGTCTAAGAAACTAGCTCGTGAATGGGGTATAACTGATCTGTATGTCCATGTTGCCATCAACAATGAGGCAGCACAGAAGCTGTACAACAAATGTGGATTTGTCTATGAGAGTGAGGAGCCTGCATGGAAGGCTAGATTTCTTGGCCGGCCTCGAAGGCTGCTTCTTTGGCTCGATCTGAAGAAAGACGCTTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MASASRLLPPTPPPHSAASPPARHRHPALAAPRSRRPINPPRLRCRAAAGAAATTTTTTGGGGGGGALVLEGSGAGAVAVREFVTLDELRAAVRLRIRTFYEYATDSYGAEDLRKSLADREYDALQDRISGKMINFQRVSCINGTVPLLPSLVSAEELCSTCKFVEDGEERVVVGSLDLNQCLWLPDELTGKRPGVNESSHTRAYLSNVCVAKELQRNGLGYALVDKSKKLAREWGITDLYVHVAINNEAAQKLYNKCGFVYESEEPAWKARFLGRPRRLLLWLDLKKDAL</aaseq>

Gene Sequence

<dnaseqindica>1..333#985..1140#1948..2043#2402..2522#2830..2999#ATGGCGTCGGCGTCGCGGCTGCTGCCGCCCACGCCACCTCCCCACTCCGCCGCATCCCCTCCTGCCCGCCACCGCCACCCCGCCCTCGCCGCCCCGCGCTCCCGCCGCCCGATCAACCCGCCGCGCCTCCGGTGCCGCGCCGCCGCGGGGGCCGCAGCCACCACCACCACCACCACCGGCGGAGGCGGGGGTGGCGGCGCGCTGGTGCTGGAGGGGAGCGGCGCGGGCGCGGTGGCTGTGCGGGAGTTCGTGACGCTCGACGAGCTCCGCGCTGCCGTGCGACTCCGCATCCGCACTTTCTACGAGTACGCCACCGACTCCTACGGGGCCGAGGTGATTGATTTGATTTGATCCCCTTTCCTGCGCGATCATCTGCTAGGTGGGGAATGTGATGGCCGACACGACCACGAATTTGTGCTAAAACTTTTCAACCTTCAATCCCCTGCGTAACATTGGGTGTGTATTAGTTTGTGATTGTCTGATTGACGAAATGCATGTTTGCAATCGTTCAGACTTTCTTTGAGTTTTAGTTTGCTAATTAACTAAATTCCGTAGCAAGGAATTTCTTGCCTGTTGCGAATAAGTTCTAAATTTGAGGTTCCCAGTGATGAATTTATTAGGTAATGGAGCCACTTTTCTTATCTGGTAGGCCATTCAAAACTTATCTTTTGCAAAGATGCAAATGTAGCGATGATTGTTACAAATATATTTCTAAATACAAATATAAATTTAGTTTTCTGTGTGTTGAAATTATCCTTCTGGTCAAGTCTTAAACAGTTAGCATAAAGGACTTCTTTTAGTTGCAAAATGATGCCACATTGTACGAATCATAATGTTTTCTTTAACCTTTTTAATAAATCTTCATTCTATATCGACTATACTCCCAGTGCATGCCTATCTTTTTCTGTTTTACCTGGGTCTGCCTGCGAACCATCAAAACGGTTAAATAATAATTTTAGTTTTACTTATTTAAAGTTCTATTAGGATCTCAGAAAATCTCTGGCGGACCGGGAGTATGACGCATTACAGGATCGAATTTCTGGGAAGATGATCAATTTTCAAAGAGTTTCATGTATAAATGGAACAGTCCCACTGTTGCCTTCTTTGGTGTCAGCAGAGGAGCTTTGTTCTACATGTAAGGTATAATGCTATATAGATATCATGCCATCAAATGAATGTTTCTTTTTGTGCAAATCCATTTCATGTGACTAAAATATTTAATTCTGAATGACAAAAAGTTAAATTCATTGCCCCAAGAATTTTTATGTATTCCATTTGCATATAATACTTACACATGAAGGGCTTGCCGCCTTGATCTAGGTGTTGAAATGGTTCGACCTGGCTCTGAGGCTAGGTTAAGAAGAGAAGAGACTAGGAACTTTTTTCATTCTTAATGAGAAGAGGTTTAGTGGAGCAGTGGACGACCTCATCATTATACATATAAATAGGATGAATTGACTGTTTAGAAACATATGCCCAAAATAGATAAGCAACCTAACATCAACTTTATCTTTAAGTAAGGAATATAAGTCATGGGCATATTGTTGGTCCTATTCGCATTAACAATTACTGCATGTGTACAAAGCTCGAGGTCCACAGGGCTTAAAGTTTACAACAGCAAGAAATTTGGAGAAGGGCATTTCTAGGCTCACTGTGTTTCATTTTTATCACAAGCAGAGTGCATAGAAAAAAAGTTCCAAATTACGGTATGAAGTTTGGCAGTAGTTATCTTTTTTGTTTTCCAGATGAGTCTGGTGGTAGTTGTATGTTCTATTAGATCAAAATTGCACTATTCATCATAAGTTTTACATATTCACCTCTCTTGGCCCGCATGTTATTCTTAGAGCTTTACACTATATCTGGTATTCATCTCTAACAGGATTAATCCATGAAATACTAGAGTTTGTCCACTGAATCTGATGTCTTATTTTTTTTGTGCACTTTCAGTTTGTTGAAGATGGAGAAGAGAGAGTTGTAGTTGGTAGTTTAGACCTTAATCAGTGTCTTTGGCTACCAGATGAACTGACCGGAAAGAGGCCTGGGGTAAGGTTATTGAGTTCTTTTGAATTGTATTCTATTAGAAATTTCATGTAATTAAGGATGAAGCTTGATTAAAGTCATAACTTAGATTAGTTGCTTTTATTTCATCGGTTGTCATTTTCTATAGTTTCAAACAGAGTTAACTGATTATACTTAACTTAATATCTGCAATGCTTGCTTTCTGACGACACATACATTTAACTTACTACATATTTTCTCATTTTGTTGTCAAATAAACATGAGTTGCATTTGGAAGTGTAGGTGAAGATATGATCCAAAATACTGATTTGTTTTAATTAAAAAAATCATTTTCTTACTTCATCAAAGAATTATAGTTATGTTTCATCATATATATGAATAGGTAAATGAGTCCAGCCATACAAGGGCTTATCTGAGCAATGTTTGTGTTGCTAAGGAGCTTCAAAGAAATGGATTGGGTTATGCCCTGGTTGACAAGTCTAAGAAACTAGCTCGTGAATGGGGTGAGTCGATTTCTGTTTGCTTTCTTAACTCATTTGCTTTCATGATGATCATATACTTATGATCATCAACATACATGAAATTGTGACTCGGTAAATGCATGGAAATCAGACCTGTGACTTGTGAGAATGTCCAGCACAACAATACCTTCTACAAACTGATAGTTATTATTTTTTTTATGAAGTCCTGCTAACTTCTGATGAGCTTAAACAGTCCATGACCTGATTAGCAGACCTATTATTTCCCTTCTTTTCCCTGATTAACGCCCTTTTTGTTCACCAATGCTCATGTTGCGCAAAATTGTGACAGGTATAACTGATCTGTATGTCCATGTTGCCATCAACAATGAGGCAGCACAGAAGCTGTACAACAAATGTGGATTTGTCTATGAGAGTGAGGAGCCTGCATGGAAGGCTAGATTTCTTGGCCGGCCTCGAAGGCTGCTTCTTTGGCTCGATCTGAAGAAAGACGCTTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028318