BGIOSGA028334

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Revision as of 07:57, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028334| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028334, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA028334

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028334, complete gene.

LocusTag

OSJNBA0023I13.36

Ensembl Transcript ID

BGIOSGA028334-TA

Ensembl Protein ID

BGIOSGA028334-PA

Length

4139

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:11285843..11289981

Sequence Coding Region

11285843..11286453,11287701..11287770,11289435..11289669,11289752..11289825,11289907..11289981

Genome Context

<gbrowseImage1> name=IndicaChromosome08:11285843..11289981 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:11285843..11289981 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGACCCGCCGTCCTTCCGCCGCCACCCGCACCCCTTCTCCATCGACCTCATCCGCTGGCTCCCCTGCTCCTCCTCCTCCTCCTCCGACCGGCTCCTCGCCGCCGCCGTCCACGACCCGGCGGCGCCCTCCTCCTCCTCCTCCCAACTCCANCTCCNTCCGCTCCACGAACCCTCCTCCCCGCTCGCCGCCCTCCCCCTCCCCTCCCGCGCCGCCTCCCTCCGCTGCTCCCCTTCCGTCCTCGCCGCGGCCACCTCCTCGGGGTCCCTCCACCTCCTCCCCTCCTCCCTCGACGCCGCCGGATCGGCCGGGGTGTCCGTCCCTGCCGGCGCCGGGTTCCACGTGGGCCCCGTCCGCGGCCTCGACTGCGGCGGCGGCGGGGAGGAGTGGGTGACGGCCGGGGAGGACGGCAGGGTGCACGTGGTGGGCGGTGGCGGGGATGGGAGGGTGGTGGCGAGGAGGCTGTGGGATGGGAAGGGGATGGCCGGGTACGAGGCCGCCAGGTGGGCGTCGGCGGCGGAGTTCGCCACCGGTGGCGCCGGCTGCGGCGTGCAGTGGTGGGACAGGAGGAAGGGGGACGCCGTGGTGGCGCAGTGCAAGGGCGTTTGGGGCCGTGGCATTGTCACTGGTATGGTTCATTCCATTGACATCCATCCATCAAGAAAGCATATCTGTGTGGTGGGAGGGTCCTCAGGGACAATATTTGCTTGGGATCTGCGGTGGCCGCAGCAACCAATACCACTCTCTGGTTTAGGCCTTAATGGAACAGCACAGCCTGTGTCTGAGAGTGAGGTCTGGGAGGTTCTTTTTGACAATTACACTCAGTCTACTGATATCATCTCATCTGCCTCGACGAGAATATTACCTGTGATGATGTGCTCAGAGGATGGGATCCTTGCAGTCGTCGAACAAGATGAGAGGCCCCTTGAATTGCTTGCTGAACCTTGCGCTATCAACTCCTTTGACATAGATCCTGAGAACCCTTCTGATGTGGTTTGTGCCCTGGAATGGGAATCAATTGGTGTACTAACACGTGGTAGAGATACAATGGCTGAAGAATGA</cdnaseq>

Protein Sequence

<aaseq>MADPPSFRRHPHPFSIDLIRWLPCSSSSSSDRLLAAAVHDPAAPSSSSSQLXLXPLHEPSSPLAALPLPSRAASLRCSPSVLAAATSSGSLHLLPSSLDAAGSAGVSVPAGAGFHVGPVRGLDCGGGGEEWVTAGEDGRVHVVGGGGDGRVVARRLWDGKGMAGYEAARWASAAEFATGGAGCGVQWWDRRKGDAVVAQCKGVWGRGIVTGMVHSIDIHPSRKHICVVGGSSGTIFAWDLRWPQQPIPLSGLGLNGTAQPVSESEVWEVLFDNYTQSTDIISSASTRILPVMMCSEDGILAVVEQDERPLELLAEPCAINSFDIDPENPSDVVCALEWESIGVLTRGRDTMAEE</aaseq>

Gene Sequence

<dnaseqindica>1..611#1859..1928#3593..3827#3910..3983#4065..4139#ATGGCGGACCCGCCGTCCTTCCGCCGCCACCCGCACCCCTTCTCCATCGACCTCATCCGCTGGCTCCCCTGCTCCTCCTCCTCCTCCTCCGACCGGCTCCTCGCCGCCGCCGTCCACGACCCGGCGGCGCCCTCCTCCTCCTCCTCCCAACTCCANCTCCNTCCGCTCCACGAACCCTCCTCCCCGCTCGCCGCCCTCCCCCTCCCCTCCCGCGCCGCCTCCCTCCGCTGCTCCCCTTCCGTCCTCGCCGCGGCCACCTCCTCGGGGTCCCTCCACCTCCTCCCCTCCTCCCTCGACGCCGCCGGATCGGCCGGGGTGTCCGTCCCTGCCGGCGCCGGGTTCCACGTGGGCCCCGTCCGCGGCCTCGACTGCGGCGGCGGCGGGGAGGAGTGGGTGACGGCCGGGGAGGACGGCAGGGTGCACGTGGTGGGCGGTGGCGGGGATGGGAGGGTGGTGGCGAGGAGGCTGTGGGATGGGAAGGGGATGGCCGGGTACGAGGCCGCCAGGTGGGCGTCGGCGGCGGAGTTCGCCACCGGTGGCGCCGGCTGCGGCGTGCAGTGGTGGGACAGGAGGAAGGGGGACGCCGTGGTGGCGCAGTGCAAGGGCGTTTGGTGAGTGTGAGAAATGGTGGATCTCTCCTGTTCCTGGTTGTTGGTTGATGTGCTTGTAAATGCTAGTAGGAGTAGTACATTATTAGTGGTTCAATTAGGATCAAGGAAATCTTCTTTGCTTGTGATTGGTGAGTAGAGACTCAATGCGCGCACAATGATTTGATTGGTGCTAGTACATTACATGTTGTTTGCTCTGTAGATATGTATGTTCCTGCTGTTGTTATGAACATGCTAGATGTATATTTATGGTTACTACGGTTATTTGCTTATGGGTTGATGAAAATTTTGGCAAGGAGAGCTTCCTGTAACTCTTTGATGGGATTCTAACATCTCAAGACATCTCTGCTTTCCTAAAATTTGGTGCACTCGAATCTGATATGGATGAAATGTACCTGTTACACAGGAATTTGATTCAAAAAATTTCAGGGTAACAAGCAACTCAATTCTTGAACTTCTCTACATTCCATTTCTGAAAGGCTATAGCTCAATAGTTATCGTTCTATTTTTAGAAGCTCAGACTAAGCTTTACTAGTGCAGATTTTGATTAATTGTGTGATCCTTTTTTGTTGTGTACTTTTAAGATATTTACATGGCTGTTTATACTTGAGTAAAAAGGGTTGGGTCTGTATGCTGATAATTGCAAAATTCAAAGTTCTGTGGTTTTTTTAATTAAATTGTCAAGATTTAGGTTTAAAAATAATCATGCAACAAATCATATAGATTCATCTCTACTCTCCAGTCTTCCTCAAAAAGCATATGGACTCCTACGTCATAAGAAAAAAAAGATAAAAATGATTTAGGCTTGTGATTATTTTTATTATCATGGTGATGAATCGAGATGTTTCATGTTTGGCGGATTTATTTGCTAAAACATCAAGATCTGATGTCCCAGAAAATAGGTTTTTTTTTTTCTGAATGGCTGCACATCTTGAACTCATGTGCTAGACGATTCAGGTTCTTTTATATAATGGATTGTTATGTTAAGTGGAATACAAGGCTGGATGGCTGAACCTTATGTGCTAGTATGCTGCAGACAATGAGTGGTTTTTGTATCACTACTTGATGGAAAAGCATAAAACTTCTGAATTACTGTTAATATCTAATTCATGATCAATTGTAAACATGTAAAGGTACCAATCTTAGCAATGTCATGTCATATAATTATGCCAGCGTTTATATTATTCCAGAAGTTGGTAATGTGCCATATTTGCTTGTTATGCTGACTTGATGACCTTGTGATTTTGCAGGGGCCGTGGCATTGTCACTGGTATGGTTCATTCCATTGACATCCATCCATCAAGAAAGCATATCTGTGTGGTAAGTTCAATGTCTTAGAAAATATGTGTAGACTCGCGTGAATAGAAGAATTAAAAAAGTGATGAGTGTCATGGGCCAGGAGTCCCAAGCCCAATGGGAACAATATCCACGACCCACGCAACTTACGTATCTCAGTTAGATAGAGTCAGAGTCTGTTGGGATTAGGTTAGAGTCCTCGATCTATATAAAGAGGGATCTTATCCCAGGTCAGAGAGGCATTAGATTGAGTTATCTCTTAGGCTGTGTTCTTCCCCCCATTTTCCCAACCCACCTCTCTTGTTTTCCACGCGCACACTTTTCAAACTGCTAAACGGTGTGATTTATGCAAAAACTTTTTATATGAAAGTTGTTTTAAAAAATCATATTAATCCATTTTTCAAAAAAATTAGTTAATACTTAATTAATCATGCAATAATACGAGCTTAGTTTTGCATGCCGGGCTCCTCCTGAACACAGCCTTAGTGCCCACCGGCCCTGCCTTTCCTGCACAATGTGCTCTAGCTCCGTTGCGCTGTTTAGGTCCAGGGCCAGTCCTGTTACTTCCTCTATTATAATCCAATTTATCCCCCTTCACCCCCTTTCATCTCAAATAATCCTCGCCCTGACAATGAGCCAAGGTATATAGCTTAATCAAACAGCTGAATGTTGCGTACACACCAAGAAGCCTCTGTTTGGACTTTGGACCATGAAGTTGGTATGATAGGGTGTCCGCTGTTCACTGAGAGTGATAGTTTCTGTTTTCTCCAAAAATCTTATAACCAAATAGAATACACGTAAGAGGAAACAACCATATATCAGTGTATTGACAAAATTTCAGCACAGGTGGAAATCTGGATTTGTTCTCAAAGTCTTTTTTTCAAAAGAAAAAGTATATCCATGTCGGCTGTTTTATTGAAATAATTAGAACTCCTTCAGAGTTAATGGCAACTAATTCCTTGATAATATCCTTAGGTCAGATGTATTTACTGATTTCTTGCAGCTCTTCTTAGTTATGTACAAGGGTTTCCATGTTATTCATACCCCCCCCCCCCCCCCACACACACACACACACAAAAAGGGAAATGGCAATGTAACTAATAATTCATTGTAATGAATGAATGCTGTCGAGTCATTGGCTACAACTCTTGCTTCTTATATTTGCCAAAGATCGGAAATTTCCAATCAGAACAATCTTTGCTGTGACAACTAAAGTCAGTTATCTGTATTGCTTAACATTGATCAAGTTATCTTCTAAAATTATCTTCAAATTACATATTGACATGTTAGTATATATTGTGAAATCCTAGTGTTGACATAAATATGTTATATCATAGTTAACTAGGGATATTTGGTCAGGAAGCGGTTATGTTGCACTTTTGTGCATCTGTGCTGTACATGCCAGAGAATTAAGATGTCTATAATGGTGGAGTGGACCTAGACGACTTTAGGGGTACGTTCTCACTGTTTACATGATGGGGGAACTGTGGGAGAATGGTGACAGTTTTAAACCTGGGATACTGGTCTCTGGACTGTCTACCAATTAGTGTCAGACCACTCATGTTCTCACAACTGCCAAATAGACCTATACTGGTCCATCACTGCGGAACTCAGAGTTGAGATGAGTTGAAAAGCTGTGTTTACAGGAGAGTCATAACTGCAATTTGAACCAGCTCTGATGTTTTTAGGTGGGAGGGTCCTCAGGGACAATATTTGCTTGGGATCTGCGGTGGCCGCAGCAACCAATACCACTCTCTGGTTTAGGCCTTAATGGAACAGCACAGCCTGTGTCTGAGAGTGAGGTCTGGGAGGTTCTTTTTGACAATTACACTCAGTCTACTGATATCATCTCATCTGCCTCGACGAGAATATTACCTGTGATGATGTGCTCAGAGGATGGGATCCTTGCAGTCGTCGAACAAGGTAAGCCTATATGAAGAAACTTGTGCCATTTTTTTTGTTGGCTATTATTCAAATTGCTGAAAAAGTTACCTTTTTGTTGCAGATGAGAGGCCCCTTGAATTGCTTGCTGAACCTTGCGCTATCAACTCCTTTGACATAGATCCTGAGAACCCTTCTGTAAGTTCAAGGTTTCTCCAGTTTGAATAGTTTTTTCTTTATTGGAAATGAGATATTAAAATTGTTTTGCTTTTTGCGCAGGATGTGGTTTGTGCCCTGGAATGGGAATCAATTGGTGTACTAACACGTGGTAGAGATACAATGGCTGAAGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028334