BGIOSGA028360

From RiceWiki
Revision as of 07:57, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028360| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028360, complete gene.| tag = P0026A0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028360

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028360, complete gene.

LocusTag

P0026A08.24

Ensembl Transcript ID

BGIOSGA028360-TA

Ensembl Protein ID

BGIOSGA028360-PA

Length

3354

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:12245478..12248831

Sequence Coding Region

12245478..12246343,12246883..12247106,12247276..12247466,12247840..12248121,12248391..12248536
,12248672..12248831

Genome Context

<gbrowseImage1> name=IndicaChromosome08:12245478..12248831 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:12245478..12248831 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGCCCGCAGCCGCCGGCGACCTCCGCTTCCTCCTTGTGGGGTTGTTGTTGGTGGTGGTGGTGGGATCCCGCCTCGTACGGCCCCCCGATGGCGGCGGCATTCCGACGAAGCTGGACGGTCCGTTCGAGCCGGCGACGCGGGCGTTCGACCGCGCGCTCCGGCAGGGGAGCGACGAAGTGCCGATCACCGAGCCGCGCCTCGCGCCGTGCGCGCGGACCCCCGCGCCCGAGCAGATCGCGCTCGCCGCCTCCTCCGACGCCACCTCGGTCTGGGTGTCGTGGGTCACCGGCGAGGCGCAGGTGGGATCCCACCTCACCCCGCTCGACCCGTCCACCGTCCGCAGCGAGGTCTGGTACAGCGAGAGGCCCTCCCCGACGGCCGCCGCCGCCGGCGACGTCTCCGGCCACTACCCGCACGTGGCGAGGGGGAAGGCGGAGGTGTACAGCCAGCTCTACCCGTACCCAGGCCTCCTCAACTACACCTCGGGCGCCATCCACCACGTCCGCCTCCGGGGCCTCAGGCCGGCCACGCGCTACTACTACCGCTGCGGCGACAGCTCCGTCCGCGGCGGCGCGGGGCTCAGCGGCGAGCTATCCTTCGAGACGCTCCCCTCCTCCGCCGCCGCGGCGTACCCTCGCCGGGTGGCGGTGGTGGGGGACCTGGGGCTGACCGGCAACTCGACGTCCACCGTCGAACACCTCGCCCGCAACGACCCGTCGCTGGTGGTCGTGGTCGGCGACATGACCTACGCCAACCAGTACCGCACCACCGGCGGCAGAGGCGTCCCCTGCTTCTCCTGCTCCTTCCCCGACGCGCCGCTCCGGGAATCCTACCAACCGCGATGGGATGGCTGGGGAAGGTTCATGGAGCCGCTCACTTCGAGGATCCCAATGATGGTGATCGAAGGGAACCATGACATCGAACCACAGGGACAAGGTGGAGCGGTGACCTTTGCATCCTACCTGGCAAGATTCGCCGTTCCATCCGAGGAGTCAGGCTCTAACACCAAGTTTTACTACTCGTTCAATGCCGGGGGCATCCATTTCATCATGCTTGGTGCCTACGTCGACTACAACCGGACAGGAGCCCAGTACTCGTGGTTAGAGAAGGATCTGCGAAAGATTGATCGACGAGTCACACCTTGGGCTGTGGCTGCTTGGCACCCGCCCTGGTATAACAGCTATTCCTCGCACTACCAGGAATTTGAGTGCATGAGACAAGCAATGGAAGGGCTCTTGTACCAACATGGTGTCGACATTGTCTTTTCAGGGCATGTGCATGCTTATGAGAGGATGAACCGGGTGTTCAACTATACTCTCGACCCCTGTGGGCCGGTCTACATTACCATTGGAGATGGAGGGAACATTGAGAAGATTGATATCGATCATGCTGATGATCCTGGAAAATGTCCCGGTCCTGGTGACAACCACCCTGAATTTGGTGGAGTCTGCCATCTCAACTTCACCTCTGGTCCTGCCAAGGGGAAATTTTGCTGGGAGAAACAGCCGGAGTGGAGCGCGTTCAGGGAGAGCAGTTTCGGACATGGCATCCTAGAGGTGGTTAATTCTACATATGCATTATGGACATGGCACCGTAACCAGGATGCATATGGAGAAGACAGCGTGGGGGATCAAATCTATATAGTTCGGCAACCGGACAAATGCTTGCTCCAGACTACGAGTGCGTCGTCTGAAAACAACTGTCCCTCTGAAGGATGCCCTTCTCTAGTGAGCAACAGTGGCTACGGTGCACAGAAGGATATTATTAGAAGTGGCCATCTCATTTGGAATGCTTTTCTAGTCATATGGATGATCTTGATCAGCACAGTTTTCATGAAGGGAAATTTGTGCTCTCGTTTCTAG</cdnaseq>

Protein Sequence

<aaseq>MAAPAAAGDLRFLLVGLLLVVVVGSRLVRPPDGGGIPTKLDGPFEPATRAFDRALRQGSDEVPITEPRLAPCARTPAPEQIALAASSDATSVWVSWVTGEAQVGSHLTPLDPSTVRSEVWYSERPSPTAAAAGDVSGHYPHVARGKAEVYSQLYPYPGLLNYTSGAIHHVRLRGLRPATRYYYRCGDSSVRGGAGLSGELSFETLPSSAAAAYPRRVAVVGDLGLTGNSTSTVEHLARNDPSLVVVVGDMTYANQYRTTGGRGVPCFSCSFPDAPLRESYQPRWDGWGRFMEPLTSRIPMMVIEGNHDIEPQGQGGAVTFASYLARFAVPSEESGSNTKFYYSFNAGGIHFIMLGAYVDYNRTGAQYSWLEKDLRKIDRRVTPWAVAAWHPPWYNSYSSHYQEFECMRQAMEGLLYQHGVDIVFSGHVHAYERMNRVFNYTLDPCGPVYITIGDGGNIEKIDIDHADDPGKCPGPGDNHPEFGGVCHLNFTSGPAKGKFCWEKQPEWSAFRESSFGHGILEVVNSTYALWTWHRNQDAYGEDSVGDQIYIVRQPDKCLLQTTSASSENNCPSEGCPSLVSNSGYGAQKDIIRSGHLIWNAFLVIWMILISTVFMKGNLCSRF</aaseq>

Gene Sequence

<dnaseqindica>1..866#1406..1629#1799..1989#2363..2644#2914..3059#3195..3354#ATGGCCGCGCCCGCAGCCGCCGGCGACCTCCGCTTCCTCCTTGTGGGGTTGTTGTTGGTGGTGGTGGTGGGATCCCGCCTCGTACGGCCCCCCGATGGCGGCGGCATTCCGACGAAGCTGGACGGTCCGTTCGAGCCGGCGACGCGGGCGTTCGACCGCGCGCTCCGGCAGGGGAGCGACGAAGTGCCGATCACCGAGCCGCGCCTCGCGCCGTGCGCGCGGACCCCCGCGCCCGAGCAGATCGCGCTCGCCGCCTCCTCCGACGCCACCTCGGTCTGGGTGTCGTGGGTCACCGGCGAGGCGCAGGTGGGATCCCACCTCACCCCGCTCGACCCGTCCACCGTCCGCAGCGAGGTCTGGTACAGCGAGAGGCCCTCCCCGACGGCCGCCGCCGCCGGCGACGTCTCCGGCCACTACCCGCACGTGGCGAGGGGGAAGGCGGAGGTGTACAGCCAGCTCTACCCGTACCCAGGCCTCCTCAACTACACCTCGGGCGCCATCCACCACGTCCGCCTCCGGGGCCTCAGGCCGGCCACGCGCTACTACTACCGCTGCGGCGACAGCTCCGTCCGCGGCGGCGCGGGGCTCAGCGGCGAGCTATCCTTCGAGACGCTCCCCTCCTCCGCCGCCGCGGCGTACCCTCGCCGGGTGGCGGTGGTGGGGGACCTGGGGCTGACCGGCAACTCGACGTCCACCGTCGAACACCTCGCCCGCAACGACCCGTCGCTGGTGGTCGTGGTCGGCGACATGACCTACGCCAACCAGTACCGCACCACCGGCGGCAGAGGCGTCCCCTGCTTCTCCTGCTCCTTCCCCGACGCGCCGCTCCGGGAATCCTACCAACCGCGATGGGATGGCTGGGGAAGGTTAGTAGCTAGTACAAGTGATGCCAAATTCAGTTCCATTTCTTTGTTTGGGATCTGAATTTCGAACAAACACATCCAAAATGCATACAAACTAACTTATAATTCTGACAGGAATTTTTCTTTCAGAGGGGAAGTGGCTTTCATTACGTTAAAAGGGGAAAATTTGCAAAATACTACCGCAAAAATACATGGGTTTGCATAATAGCAGATTCAGATGATCCAAATTCTTGTACATTGGAATGACATGTTGGTACTTGAACCACTTGTCAATGACACATACGGTTTCTAGCTACGTAATATTTTGATCCTATTAACAAAATTACCAAATTAAAAAAGAAATCCTAAATAAATGGATTTAAATTGCTTCGTTTTTCAAGTCAGACTTTTGTATATTTTTTAAGGAAGTTTGACTTTTGTAGTTAGCATACACGCAATTGGAAATCAAGAACTTCTGACAAATTTCAAACAAGAAAGCGGGTGAAATTATCCTTGGACTCTGCTTATATAAAGTTTAACTGAAAACATTTGTATGGATTCAGGTTCATGGAGCCGCTCACTTCGAGGATCCCAATGATGGTGATCGAAGGGAACCATGACATCGAACCACAGGGACAAGGTGGAGCGGTGACCTTTGCATCCTACCTGGCAAGATTCGCCGTTCCATCCGAGGAGTCAGGCTCTAACACCAAGTTTTACTACTCGTTCAATGCCGGGGGCATCCATTTCATCATGCTTGGTGCCTACGTCGACTACAACCGGACAGGTAATCCATCAGCCACTATTCATCTTGATGGCACTCAATATCAGGAATGTATCATTAAGATTTTAGAATTGTTCACATTAAGTTGCATAGTCATGTCAGGCCATTTCATTGTTCATACATTCTCTTGTTGATTGTGGTGACATTTTCGTGCTTATTACATTGTGCGTAGGAGCCCAGTACTCGTGGTTAGAGAAGGATCTGCGAAAGATTGATCGACGAGTCACACCTTGGGCTGTGGCTGCTTGGCACCCGCCCTGGTATAACAGCTATTCCTCGCACTACCAGGAATTTGAGTGCATGAGACAAGCAATGGAAGGGCTCTTGTACCAACATGGTGTCGACATTGTCTTTTCAGGGCATGTAAGCGCATACATTTTGCATTTTAGGCTTAGTTCTTTTTAGATTAGTGAGCAGATTACTGAAAACAGATTATTTGTTCTACTCTTCAAAAAATGTATTTTCTCGAAAAACTTTCTTATACGCCACTTGCATATTTTAAGTTATTTATTAAATTTATTTATAAAAATAATTTAATTTATACCCTATAAACAAGTACATATAATCCCCATAACAATCCGCTCAATAATCTGTTGCAATCTGAGCCATGGTTCCATCTAATAATTAATTTCAATAAGCGGGTGTACATATGTAGGGTTTGTCTGTGCTCTTCCTCGTCTCGGATAATTGATTCAGGCCATAAATTTTTACGAATTCACATATGAATGATCTAAAGGTGCATGCTTATGAGAGGATGAACCGGGTGTTCAACTATACTCTCGACCCCTGTGGGCCGGTCTACATTACCATTGGAGATGGAGGGAACATTGAGAAGATTGATATCGATCATGCTGATGATCCTGGAAAATGTCCCGGTCCTGGTGACAACCACCCTGAATTTGGTGGAGTCTGCCATCTCAACTTCACCTCTGGTCCTGCCAAGGGGAAATTTTGCTGGGAGAAACAGCCGGAGTGGAGCGCGTTCAGGGAGAGCAGTTTCGGACATGGCATCCTAGAGGTTATTCCCAGTTTGTTTATGATATAATGAACACTCAATCACTCTGTTTTTACTACTCCTTCCGTTTTGAATTATTTTTCGTTTTAGTTTTATCCTAAACCAATTTCCTAATTTTGATCATCGATGTATATAGCTTAATTAAGAACATATGCATTATATATTCTGAAAATATTTCTTATGGCCAAATTTAGCTGATATGATTTATGTTATATGTTAATTATATATTGGGAAGTACTCCAACTTCACAGTTGTCACGTGTACGAGTGCAGGTGGTTAATTCTACATATGCATTATGGACATGGCACCGTAACCAGGATGCATATGGAGAAGACAGCGTGGGGGATCAAATCTATATAGTTCGGCAACCGGACAAATGCTTGCTCCAGACTACGAGTGCGTCGTCTGAAAACAACTGGTGATTTTCATTTGATGATGAAATAAATAATCATGAATTTTGTTACAATTTCTTGTTGAAATTTATGCCTCTAATCAACGTCCATGTAAAATATTCTCAATCACTTTGTTTTTTTTTTTACGTTTTATTGAACAGTCCCTCTGAAGGATGCCCTTCTCTAGTGAGCAACAGTGGCTACGGTGCACAGAAGGATATTATTAGAAGTGGCCATCTCATTTGGAATGCTTTTCTAGTCATATGGATGATCTTGATCAGCACAGTTTTCATGAAGGGAAATTTGTGCTCTCGTTTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028360